Click here to switch to the map view.

The map label for this gene is yjfC [H]

Identifier: 78048708

GI number: 78048708

Start: 3575417

End: 3576583

Strand: Reverse

Name: yjfC [H]

Synonym: XCV3152

Alternate gene names: 78048708

Gene position: 3576583-3575417 (Counterclockwise)

Preceding gene: 78048709

Following gene: 78048707

Centisome position: 69.07

GC content: 64.18

Gene sequence:

>1167_bases
ATGCAACGCATCCTGATCCCCGAACGCGCGGACTGGCGCACGCAGGCCGAATCGCTGGGCTTCCACTTCCACACCATCGA
CGGCGAACCGTATTGGGACGAAAGCGCCTACTACGCGTTTTCGCTGCGTCAGATCGAAGACGACATCGAAGCGCCCACGC
AAGAGTTGCACGACATGGCGATGCAGCTGGTGGACGAGGTGGTGGGCTCGGAAGCGCTGATGACCCAGCTGGCCATTCCG
CCGTTCTACTGGGACTGGATCGCCAACTCCTGGAAAGGGCGCGACCCGCATCTGTATGGCCGCATGGACCTGGCGTATTC
GGGCGATGGCCCGGCCAAGCTGTACGAACTCAATTACGACACGCCAACATCGCTTTACGAATCGGCCTACTTCCAGTGGT
TGTGGCTGGAACAGCAGATCGCCAGCGGTGCGCTGCCCAAGGGAACCGATCAGTACAACCTGATCCAGGACCTGCTGTGC
GAAACCCTAGGCGCGCTGGCCGTGGATGGCGCGATCGGTGCGCAGATGCATTTTGCGGCGGTGCGCGATTCGCTGGAGGA
TCGCGCCACCGTGCGTTACCTGCGCGACTGTGCGCATCAGGTGGGCATCAGCACCGAGGAAGTGGCCATCGAAGACATCG
GCCTGAGTGCCGAGGGCTGGTTCACCGACGAACAGGACCGGGTGATCCACACGCTGTTCAAGCTGTATCCGCTGGAATTC
ATGATGGAAGAACGCTTCGGGCCGGCATTGATCGCCGACCGGGTGCGCCTGATCGAGCCGGCATGGAAATCGGTGTTGAG
CAACAAGGGCATCCTGCCGCTGCTGTGGGACCGCCATCAGGGTCATCCGAATCTGCTGCCTGCCCGCTTTGCGCAGGCCG
GTGAGGCACCAACCGCAGGCTGGGTGCGCAAGCCGCTGCTGTCGCGCGAGGGCGCCAACATCGCGCTGGTGACGGCGCAA
GGCGAGGCCGCGCACACCGATGGCCCGTACGTGGACGGCCCGGCGATTCTGCAGGCGCATCACCCGCTGCCGGTGTTCGA
CGGGCGCCATGCGTTGGTGGGCAGCTGGGTTGTGGCGGATCGTCCTGCCGGACTGGGCATGCGCGACGACGCTGGCCCGA
TCACCCGCGACACCTCGCGCTTCGTGCCGCACGTCATCACCGATTGA

Upstream 100 bases:

>100_bases
ACGCGCGCCATCACCGTGTCGCGTTCGGGCTTCGGTTCCAGCGCGGCGGCGCGCAGTTCGTTCGGCAGCGGCGGGCGCAG
CTCGGGCTTCGGCGGCTGAC

Downstream 100 bases:

>100_bases
TGTGTATCGGCGGGTGCATCGCCAGTGCGAAGTAGCGGTGCCGCTAATTGGAGCAGGCCGTCCTTTGCGGCACACCTGCA
GACGGGTGTGGGGAGCCATG

Product: putative glutathionylspermidine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MQRILIPERADWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQELHDMAMQLVDEVVGSEALMTQLAIP
PFYWDWIANSWKGRDPHLYGRMDLAYSGDGPAKLYELNYDTPTSLYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLC
ETLGALAVDGAIGAQMHFAAVRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
MMEERFGPALIADRVRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGEAPTAGWVRKPLLSREGANIALVTAQ
GEAAHTDGPYVDGPAILQAHHPLPVFDGRHALVGSWVVADRPAGLGMRDDAGPITRDTSRFVPHVITD

Sequences:

>Translated_388_residues
MQRILIPERADWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQELHDMAMQLVDEVVGSEALMTQLAIP
PFYWDWIANSWKGRDPHLYGRMDLAYSGDGPAKLYELNYDTPTSLYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLC
ETLGALAVDGAIGAQMHFAAVRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
MMEERFGPALIADRVRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGEAPTAGWVRKPLLSREGANIALVTAQ
GEAAHTDGPYVDGPAILQAHHPLPVFDGRHALVGSWVVADRPAGLGMRDDAGPITRDTSRFVPHVITD
>Mature_388_residues
MQRILIPERADWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQELHDMAMQLVDEVVGSEALMTQLAIP
PFYWDWIANSWKGRDPHLYGRMDLAYSGDGPAKLYELNYDTPTSLYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLC
ETLGALAVDGAIGAQMHFAAVRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
MMEERFGPALIADRVRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGEAPTAGWVRKPLLSREGANIALVTAQ
GEAAHTDGPYVDGPAILQAHHPLPVFDGRHALVGSWVVADRPAGLGMRDDAGPITRDTSRFVPHVITD

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli ygiC [H]

Homologues:

Organism=Escherichia coli, GI1790629, Length=391, Percent_Identity=51.4066496163683, Blast_Score=390, Evalue=1e-110,
Organism=Escherichia coli, GI1789416, Length=389, Percent_Identity=48.3290488431877, Blast_Score=388, Evalue=1e-109,
Organism=Escherichia coli, GI1789361, Length=390, Percent_Identity=25.1282051282051, Blast_Score=115, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 43503; Mature: 43503

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRILIPERADWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQELHDMA
CCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHH
MQLVDEVVGSEALMTQLAIPPFYWDWIANSWKGRDPHLYGRMDLAYSGDGPAKLYELNYD
HHHHHHHHCCHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEECCC
TPTSLYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLCETLGALAVDGAIGAQMHFAA
CHHHHHHHHHHHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
HHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MMEERFGPALIADRVRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGEAPTAG
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCH
WVRKPLLSREGANIALVTAQGEAAHTDGPYVDGPAILQAHHPLPVFDGRHALVGSWVVAD
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEC
RPAGLGMRDDAGPITRDTSRFVPHVITD
CCCCCCCCCCCCCCCCCHHHCCCHHCCC
>Mature Secondary Structure
MQRILIPERADWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQELHDMA
CCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHH
MQLVDEVVGSEALMTQLAIPPFYWDWIANSWKGRDPHLYGRMDLAYSGDGPAKLYELNYD
HHHHHHHHCCHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEECCC
TPTSLYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLCETLGALAVDGAIGAQMHFAA
CHHHHHHHHHHHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
HHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MMEERFGPALIADRVRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGEAPTAG
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCH
WVRKPLLSREGANIALVTAQGEAAHTDGPYVDGPAILQAHHPLPVFDGRHALVGSWVVAD
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEC
RPAGLGMRDDAGPITRDTSRFVPHVITD
CCCCCCCCCCCCCCCCCHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7961409 [H]