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The map label for this gene is ygiB [C]

Identifier: 78048709

GI number: 78048709

Start: 3576585

End: 3577157

Strand: Reverse

Name: ygiB [C]

Synonym: XCV3153

Alternate gene names: 78048709

Gene position: 3577157-3576585 (Counterclockwise)

Preceding gene: 78048710

Following gene: 78048708

Centisome position: 69.08

GC content: 65.79

Gene sequence:

>573_bases
ATGAAGCGATCACGCAATCTCAAACTCACCCTGATGGCTGCGCTGCCGGCCGCCTTCGTCACCGGCTGCGGCTCGGAGCC
GGAGACCGGTGTGGTGCTGCAATCGGCGTCGGACTGTTACCAGATCAAGCAGGAACAGTCCGATATCCAGCAATGCCTCA
AGGCCTACGACGAGGCGGTGGCCAAGCATCAGCAGGCCGCGCCGCGCTTCACCACGCGCTACGAGTGCGATGAACAGTTC
GGCAGCTGCACGGCGATCACCAATCCGCAGGGGCAGCAGAGCTGGATCCCGCCGATGGGCGGTTTTTTGCTGGGTTATGC
GCTGGGCAACATGAGCGGCGGCGGTTACCGCTATGGCGGCTCGATTCCGCTGTACCGCGATTACCGCAGCGGCGGTTACT
ACAAGCCCAATGGCGATCTGGCCAGCAACCGCATTGGCACGGTGCGTGGGCGCAGCGGCGCCATCGACATGCCCACGCGC
GCCATCACCGTGTCGCGTTCGGGCTTCGGTTCCAGCGCGGCGGCGCGCAGTTCGTTCGGCAGCGGCGGGCGCAGCTCGGG
CTTCGGCGGCTGA

Upstream 100 bases:

>100_bases
CACCGACAACATCACCGCCGCCGGTATCTTTTCGGCCGGCGTGTCGATCGCGGTGGGGCTGATCAATGCCGCCGCGATCA
CGCCGTAACGGAGCGCGGGC

Downstream 100 bases:

>100_bases
CATGCAACGCATCCTGATCCCCGAACGCGCGGACTGGCGCACGCAGGCCGAATCGCTGGGCTTCCACTTCCACACCATCG
ACGGCGAACCGTATTGGGAC

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAVAKHQQAAPRFTTRYECDEQF
GSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGGSIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGG

Sequences:

>Translated_190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAVAKHQQAAPRFTTRYECDEQF
GSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGGSIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGG
>Mature_190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAVAKHQQAAPRFTTRYECDEQF
GSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGGSIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693179, Length=212, Percent_Identity=27.8301886792453, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20155; Mature: 20155

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAV
CCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AKHQQAAPRFTTRYECDEQFGSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGG
HHHHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECC
SIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTRAITVSRSGFGSSAAARSSFG
CCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHCC
SGGRSSGFGG
CCCCCCCCCC
>Mature Secondary Structure
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAV
CCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AKHQQAAPRFTTRYECDEQFGSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGG
HHHHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECC
SIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTRAITVSRSGFGSSAAARSSFG
CCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHCC
SGGRSSGFGG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA