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The map label for this gene is 78048701

Identifier: 78048701

GI number: 78048701

Start: 3564377

End: 3565429

Strand: Reverse

Name: 78048701

Synonym: XCV3145

Alternate gene names: NA

Gene position: 3565429-3564377 (Counterclockwise)

Preceding gene: 78048702

Following gene: 78048700

Centisome position: 68.85

GC content: 66.76

Gene sequence:

>1053_bases
ATGGCCGCACGTGCTACCGATCTGTCCGTCGCTGCAGGCGCCGCCATCGCCATTGCCGAGCGCGGAGACTGTGGCCCGGA
TGCGTTGTCGCTGCCCGCACTTTGCCAGGCCGCCGAGCCGGTGGTGCTGCGTGGCGTTGCGCGGCACTGGTCGCTGGTGC
AGGCCGGGCTGCGCGGCGCCGATGAGGCCATGGCGCTGTTGCGCGCGCACGATACCGGCCGCCCCCTGCAGTATTCCTAT
GGCGGCCCGGAGATCGGCAGCCGCCCGTTTTATCGCGACGATTGCAGCGCGCTCAACTTCCAGGTGCAGCGCGGCAGCGT
GAGTACCTTGCTGGATGCCATTGCGGCACATCGTGACGACCCGCAGCCGCCCACCTATTACCTGGCCTCGTTGCCGGTGG
ACGCCAATCTGCCAGGGTTGCGCGCCCACAACGATCTGGATGTGGCTGCCAACGGCAGCCCCGTGCAGCCCAGCATCTGG
ATCGGTAACCGGGTGATCGCTTCGTGCCACTACGATGCGCTGGACAACCTGGCGTGCTGCGCGGTCGGGCAACGGCGCTT
TACGCTGTTTCCGCCGGAGCAGGTCGCCAATCTGTATCCGGGTCCGCTCGATCCTACGCCGGGCGGGCAGGTGGTGAGCA
TGGTCGATTTCGCCGATCCGGACCTGCAACGCTTTCCGCGTTTTGCCGATGCCTTGCCGCATGCGCGCAGCGTGGTGCTG
GAGCCGGGCGATGCGTTGTTCATTCCCAGCATGTGGTGGCACCACGTCCAATCGCTGCAGCCGTTCAACGTGCTGATCAA
TTACTGGTGGAGCAGTGCGCCAGCGCACTTGCCCGCCGCGATGCCGGCGCTGTATCACGCGCTGTGGGCAATTCGCGACC
GTCCGGCAGCCGAAAAACAGGCATGGCGCGCGTTGTTCGATCACTACGTGTTCGGCCCTGCCGAGCAGGCCGGCGAGCAT
CTGCCCGAACCGGCGCGCCATGCGCTCGGCCCCATCGATCCCATGCTGTCGCGGCAGCTGCGCGCCATGCTGATCGGCAA
GTTGAACCGCTGA

Upstream 100 bases:

>100_bases
ATGCTGGCATCGCTGCACAACGTGCGCCGGCTGATGGCCGAAAAGCAGCGCCGCCTGCAGCAGTCGCACAGCGCCCCCGT
TGCCGCGTACGCCTGAGCGT

Downstream 100 bases:

>100_bases
TGTGCAGCACCGCCCTCAACCCATGCCACAGGAGTGCGCAGTGACTCAGGCTCAGATTCGCAAGGTGGTGATCGCCGGTG
GTGGAACGGCCGGCTGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Factor Jumonji Domain-Containing Protein; Transcription Factor Jumonji Jmjc Domain-Containing Protein; Transcription Factor Jumonji/Aspartyl Beta-Hydroxylase; Transcription Factor Jumonji JmjC Domain Protein; Transcription Factor Jumonji; Transcription Factor Jumonji JmjC Domain-Containing Protein; JmjC Domain-Containing Protein; PASs1-Like Protein; JmjC Domain Protein; Transcription Factor Jumonji JmjC; Acetyltransferase; PASS1 Domain-Containing Protein; PASs1-Related Protein

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MAARATDLSVAAGAAIAIAERGDCGPDALSLPALCQAAEPVVLRGVARHWSLVQAGLRGADEAMALLRAHDTGRPLQYSY
GGPEIGSRPFYRDDCSALNFQVQRGSVSTLLDAIAAHRDDPQPPTYYLASLPVDANLPGLRAHNDLDVAANGSPVQPSIW
IGNRVIASCHYDALDNLACCAVGQRRFTLFPPEQVANLYPGPLDPTPGGQVVSMVDFADPDLQRFPRFADALPHARSVVL
EPGDALFIPSMWWHHVQSLQPFNVLINYWWSSAPAHLPAAMPALYHALWAIRDRPAAEKQAWRALFDHYVFGPAEQAGEH
LPEPARHALGPIDPMLSRQLRAMLIGKLNR

Sequences:

>Translated_350_residues
MAARATDLSVAAGAAIAIAERGDCGPDALSLPALCQAAEPVVLRGVARHWSLVQAGLRGADEAMALLRAHDTGRPLQYSY
GGPEIGSRPFYRDDCSALNFQVQRGSVSTLLDAIAAHRDDPQPPTYYLASLPVDANLPGLRAHNDLDVAANGSPVQPSIW
IGNRVIASCHYDALDNLACCAVGQRRFTLFPPEQVANLYPGPLDPTPGGQVVSMVDFADPDLQRFPRFADALPHARSVVL
EPGDALFIPSMWWHHVQSLQPFNVLINYWWSSAPAHLPAAMPALYHALWAIRDRPAAEKQAWRALFDHYVFGPAEQAGEH
LPEPARHALGPIDPMLSRQLRAMLIGKLNR
>Mature_349_residues
AARATDLSVAAGAAIAIAERGDCGPDALSLPALCQAAEPVVLRGVARHWSLVQAGLRGADEAMALLRAHDTGRPLQYSYG
GPEIGSRPFYRDDCSALNFQVQRGSVSTLLDAIAAHRDDPQPPTYYLASLPVDANLPGLRAHNDLDVAANGSPVQPSIWI
GNRVIASCHYDALDNLACCAVGQRRFTLFPPEQVANLYPGPLDPTPGGQVVSMVDFADPDLQRFPRFADALPHARSVVLE
PGDALFIPSMWWHHVQSLQPFNVLINYWWSSAPAHLPAAMPALYHALWAIRDRPAAEKQAWRALFDHYVFGPAEQAGEHL
PEPARHALGPIDPMLSRQLRAMLIGKLNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21314714, Length=135, Percent_Identity=38.5185185185185, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI148596936, Length=128, Percent_Identity=36.71875, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI223942018, Length=238, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI223942014, Length=238, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI89242134, Length=108, Percent_Identity=35.1851851851852, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17557716, Length=125, Percent_Identity=33.6, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24663831, Length=192, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38051; Mature: 37919

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARATDLSVAAGAAIAIAERGDCGPDALSLPALCQAAEPVVLRGVARHWSLVQAGLRGA
CCCCCCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH
DEAMALLRAHDTGRPLQYSYGGPEIGSRPFYRDDCSALNFQVQRGSVSTLLDAIAAHRDD
HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCC
PQPPTYYLASLPVDANLPGLRAHNDLDVAANGSPVQPSIWIGNRVIASCHYDALDNLACC
CCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCEEEEEECHHHHCCHHHH
AVGQRRFTLFPPEQVANLYPGPLDPTPGGQVVSMVDFADPDLQRFPRFADALPHARSVVL
HCCCCEEEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEE
EPGDALFIPSMWWHHVQSLQPFNVLINYWWSSAPAHLPAAMPALYHALWAIRDRPAAEKQ
CCCCEEEECHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
AWRALFDHYVFGPAEQAGEHLPEPARHALGPIDPMLSRQLRAMLIGKLNR
HHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AARATDLSVAAGAAIAIAERGDCGPDALSLPALCQAAEPVVLRGVARHWSLVQAGLRGA
CCCCCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH
DEAMALLRAHDTGRPLQYSYGGPEIGSRPFYRDDCSALNFQVQRGSVSTLLDAIAAHRDD
HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCC
PQPPTYYLASLPVDANLPGLRAHNDLDVAANGSPVQPSIWIGNRVIASCHYDALDNLACC
CCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCEEEEEECHHHHCCHHHH
AVGQRRFTLFPPEQVANLYPGPLDPTPGGQVVSMVDFADPDLQRFPRFADALPHARSVVL
HCCCCEEEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEE
EPGDALFIPSMWWHHVQSLQPFNVLINYWWSSAPAHLPAAMPALYHALWAIRDRPAAEKQ
CCCCEEEECHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
AWRALFDHYVFGPAEQAGEHLPEPARHALGPIDPMLSRQLRAMLIGKLNR
HHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA