| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is 78048702
Identifier: 78048702
GI number: 78048702
Start: 3565434
End: 3566192
Strand: Reverse
Name: 78048702
Synonym: XCV3146
Alternate gene names: NA
Gene position: 3566192-3565434 (Counterclockwise)
Preceding gene: 78048703
Following gene: 78048701
Centisome position: 68.87
GC content: 66.4
Gene sequence:
>759_bases ATGACGCGATACGCAGTGCTCAACAACGTGGCGCATCACGACCTGCGCGTGATCCTGCGCTTTGGTGCGCAATTCGGCGA CGCGGTCGGCGTGGTGCCGGCCTTCGTCACCGAATATGCCGAGCTGCAGCGCGAGTACCCGCTGTTCTTCCGCAAGGATC CGGCCGGGAGTGGTTACCAGCCGGTGGCGCTGCTGGGCTTCGCACAGGATGAAAACCTGTTCCTGCAGGACGGGCGCTGG AATGCCAGCTATCTGCCGGGCATCGTTGCCAAGGGGCCGTTCCTGATCGGCTTCCAGGAGCAACACGTCGATGGGGCCCT GGTGCAGGAGCCGGTGATCCATGTCGACCTGGAACATCCGCGTATCAGCCGCAGCGAGGGCGAGGCGGTGTTCCTGCCGC AAGGCGGCCACAGCCCGTATCTGGAACACATCATCGGCGTGTTGCGCGGCATCCGCGATGGCGTGGACGCGGGACAGGCG ATGGCGGCCGCCTTCGACGCGCTCGGCCTGATCCAGCCGGTGCGGCTGGACGTTGCGCTGGATGCCAGCCATGCCACGCA GTTGCAGGGCTTGTTCGCGATCGACCGCGAGCGGCTGGCCGCCCTGGATGCGCAAGCGCTGCAGCAGTTGCATCAGGCCG GCTATCTGGAAGGTGCCTTCCTGATGCTGGCATCGCTGCACAACGTGCGCCGGCTGATGGCCGAAAAGCAGCGCCGCCTG CAGCAGTCGCACAGCGCCCCCGTTGCCGCGTACGCCTGA
Upstream 100 bases:
>100_bases TTTTGGCAATGCTCAGCATCGATAAGCACGCGGGGAATGCGTGCGCCCGAATTCCCTCATGACTGCAGCGCTCCGCGATG GACGGCTGCTGGAGTTTCAG
Downstream 100 bases:
>100_bases GCGTATGGCCGCACGTGCTACCGATCTGTCCGTCGCTGCAGGCGCCGCCATCGCCATTGCCGAGCGCGGAGACTGTGGCC CGGATGCGTTGTCGCTGCCC
Product: SapC-related protein
Products: NA
Alternate protein names: SapC Related Protein; SapC-Related Protein; SapC-Like Protein; SapC Superfamily Protein; Sapc Family Protein
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTRYAVLNNVAHHDLRVILRFGAQFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYQPVALLGFAQDENLFLQDGRW NASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHPRISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGVDAGQA MAAAFDALGLIQPVRLDVALDASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL QQSHSAPVAAYA
Sequences:
>Translated_252_residues MTRYAVLNNVAHHDLRVILRFGAQFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYQPVALLGFAQDENLFLQDGRW NASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHPRISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGVDAGQA MAAAFDALGLIQPVRLDVALDASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL QQSHSAPVAAYA >Mature_251_residues TRYAVLNNVAHHDLRVILRFGAQFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYQPVALLGFAQDENLFLQDGRWN ASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHPRISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGVDAGQAM AAAFDALGLIQPVRLDVALDASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRLQ QSHSAPVAAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27650; Mature: 27519
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYAVLNNVAHHDLRVILRFGAQFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYQ CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC PVALLGFAQDENLFLQDGRWNASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHP CEEEEEECCCCCEEEECCCCCCHHCCCHHHCCCEEEEEHHHCCCCHHHHCCEEEEECCCC RISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGVDAGQAMAAAFDALGLIQPVRLDVAL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEE DASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQSHSAPVAAYA HHHCCCCCCCCC >Mature Secondary Structure TRYAVLNNVAHHDLRVILRFGAQFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYQ CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC PVALLGFAQDENLFLQDGRWNASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHP CEEEEEECCCCCEEEECCCCCCHHCCCHHHCCCEEEEEHHHCCCCHHHHCCEEEEECCCC RISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGVDAGQAMAAAFDALGLIQPVRLDVAL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEE DASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQSHSAPVAAYA HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA