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The map label for this gene is yhbO [H]

Identifier: 78048632

GI number: 78048632

Start: 3498891

End: 3499433

Strand: Reverse

Name: yhbO [H]

Synonym: XCV3076

Alternate gene names: 78048632

Gene position: 3499433-3498891 (Counterclockwise)

Preceding gene: 78048633

Following gene: 78048624

Centisome position: 67.58

GC content: 61.69

Gene sequence:

>543_bases
ATGTCTCATTCGCTCTCTGGCAAAACCGTCGCCGTGCTGGCCACCGATGGCTTCGAGCAATCCGAACTGACCGAACCCAA
GCGCCTGCTGGAAAGCTGGGGTGCCAAGGTCGAGGTGATCGCGCCCGGCGACGGCACGCAAATTCGCGGCTGGAATCACA
CAGAGTGGGGCGATTCGGTAACGGTCGATCGGCGGCTAGATCATGCAGCGGCGGAATCCTACGACGCACTGGTGTTGCCT
GGCGGTGTGCTCAATCCCGACACACTGCGCACCGATGAGCAGGCAATCACGTTCATTCGCGCGTTTTCGAACGCACAAAA
ACCGGTGGCGGCGATCTGTCACGGGCCGTGGTTGCTGCTCGAAAGCGACTTGGTCCGCGACCGCAAGGTCACTTCATGGC
CATCGGTCAAGACGGACCTGATCAATGCCGGTGCGCGCTGGCAGGATGCCGAAGTGGTGGTCGACGGCCAACTGATTACC
AGCCGCAAGCCGGACGACATTCCTGCATTCGCCGCAGCCGTGGCCAAGGCCTTGGCTGCATAG

Upstream 100 bases:

>100_bases
CACGCAGCCATGTGCGCGTACTGACGCCGCGCACACATCGGTTCACGGATGCGCAACGGCGTGATTCCTGGGGTCTGGGC
TTCTTTTCAAGGAGCCTCCC

Downstream 100 bases:

>100_bases
GTTCTTCACTGGCCAGTGTCAGCTCGAAACACCAAGGCCCGGCGCAGATGCGTCGGGCCTTGATGTGTAGCCTTGCGTGG
ATTGTCGCCATCCACGCCAA

Product: DJ-1/PfpI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSHSLSGKTVAVLATDGFEQSELTEPKRLLESWGAKVEVIAPGDGTQIRGWNHTEWGDSVTVDRRLDHAAAESYDALVLP
GGVLNPDTLRTDEQAITFIRAFSNAQKPVAAICHGPWLLLESDLVRDRKVTSWPSVKTDLINAGARWQDAEVVVDGQLIT
SRKPDDIPAFAAAVAKALAA

Sequences:

>Translated_180_residues
MSHSLSGKTVAVLATDGFEQSELTEPKRLLESWGAKVEVIAPGDGTQIRGWNHTEWGDSVTVDRRLDHAAAESYDALVLP
GGVLNPDTLRTDEQAITFIRAFSNAQKPVAAICHGPWLLLESDLVRDRKVTSWPSVKTDLINAGARWQDAEVVVDGQLIT
SRKPDDIPAFAAAVAKALAA
>Mature_179_residues
SHSLSGKTVAVLATDGFEQSELTEPKRLLESWGAKVEVIAPGDGTQIRGWNHTEWGDSVTVDRRLDHAAAESYDALVLPG
GVLNPDTLRTDEQAITFIRAFSNAQKPVAAICHGPWLLLESDLVRDRKVTSWPSVKTDLINAGARWQDAEVVVDGQLITS
RKPDDIPAFAAAVAKALAA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=178, Percent_Identity=29.7752808988764, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI31543380, Length=178, Percent_Identity=29.7752808988764, Blast_Score=68, Evalue=4e-12,
Organism=Escherichia coli, GI87082219, Length=174, Percent_Identity=45.4022988505747, Blast_Score=144, Evalue=4e-36,
Organism=Drosophila melanogaster, GI28571932, Length=173, Percent_Identity=28.9017341040462, Blast_Score=77, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19438; Mature: 19307

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSLSGKTVAVLATDGFEQSELTEPKRLLESWGAKVEVIAPGDGTQIRGWNHTEWGDSV
CCCCCCCCEEEEEEECCCCCHHCCCHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCE
TVDRRLDHAAAESYDALVLPGGVLNPDTLRTDEQAITFIRAFSNAQKPVAAICHGPWLLL
EHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHCCCEEEE
ESDLVRDRKVTSWPSVKTDLINAGARWQDAEVVVDGQLITSRKPDDIPAFAAAVAKALAA
ECHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SHSLSGKTVAVLATDGFEQSELTEPKRLLESWGAKVEVIAPGDGTQIRGWNHTEWGDSV
CCCCCCCEEEEEEECCCCCHHCCCHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCE
TVDRRLDHAAAESYDALVLPGGVLNPDTLRTDEQAITFIRAFSNAQKPVAAICHGPWLLL
EHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHCCCEEEE
ESDLVRDRKVTSWPSVKTDLINAGARWQDAEVVVDGQLITSRKPDDIPAFAAAVAKALAA
ECHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]