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The map label for this gene is pilT [H]

Identifier: 78048624

GI number: 78048624

Start: 3492349

End: 3493386

Strand: Reverse

Name: pilT [H]

Synonym: XCV3068

Alternate gene names: 78048624

Gene position: 3493386-3492349 (Counterclockwise)

Preceding gene: 78048632

Following gene: 78048623

Centisome position: 67.46

GC content: 61.85

Gene sequence:

>1038_bases
ATGGATATCGCTGAACTATTGGCGTTTTCTGTCAAGAACAAGGCATCGGACCTGCACCTGTCTGCAGGGCTGCCGCCGAT
GATCCGTGTCGATGGCGATGTCCGTCGCATCAATATTCCGGCGTTGGACCACAAGCAGGTGCACGCGCTGGTGTACGACA
TCATGTCGGACAAGCAGCGGCGCGATTACGAGGAATTTCTCGAGGTCGACTTTTCGTTCGAAATTCCGTCGCTGGCGCGT
TTCCGCGTCAATGCGTTCAACCAGAACCGCGGCGCCGGTGCGGTGTTCCGTACCATTCCGTCCGAAGTGCTGACGCTGGA
AGACCTGGGCTGCCCGCCGATCTTCCGCCAGCTGATCGACCAGCCGCAGGGCCTGATCCTGGTCACCGGCCCGACCGGCT
CGGGCAAGTCGACCACGCTGGCAGGCATGATCGACTACATCAACAAGAATGAGTACGGGCACATCCTCACCGTCGAGGAC
CCGATCGAATTCGTGCACACCTCGCAGAAGTGCCTGATTAACCAGCGCGAAGTGCACCGCGATACCCACGGTTTCAACGA
GGCGCTGCGCTCGGCACTGCGCGAAGACCCGGACATCATCCTGGTCGGCGAATTGCGCGACCTGGAAACCATTCGCCTGG
CGCTCACCGCCGCGGAAACCGGCCACCTGGTGTTCGGCACCTTGCACACCAGCTCGGCGGCCAAGACCATCGACCGCATC
ATCGACGTGTTCCCGGCCGGCGAAAAGCCGATGGTGCGCTCGATGCTGTCCGAATCGCTGCGCGCAGTGATCTCGCAGGC
ACTGCTGAAGAAGGTCGGCGGCGGCCGCACGGCGGCGTGGGAAATCATGGTCGGCACCCCGGCCATCCGCAACCTGATCC
GCGAGGACAAGGTGGCGCAGATGTATTCCTCGATCCAGACCGGCCAGCAATACGGCATGCAGACGTTGGACCAGCATCTG
CAGGACCTGGTCAAGCGCAGCCTGATCACGCGCAACCAGGCGCGCGAGTACGCCAAGGACAAGCGGATATTCGAGTAG

Upstream 100 bases:

>100_bases
GACCTGAACCGGCGACAGGGCTGCTTCCCGCCGGCAGCCAGAACGCTATACTGCCGGCCGGGGAGTACCTTCCAATCGCA
GCCTAGGGGAAAAGCAGCGC

Downstream 100 bases:

>100_bases
CCGGGATTCGGGATTCGGGATTGGGGATTCGCAACTGCGATTTCCCGTGCCGGATCCGCTCTTGCCAATCCCGAATCTCC
ACTCCCGAATCCCTGCTCCA

Product: Tfp pilus assembly protein, putative ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDYEEFLEVDFSFEIPSLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLIDQPQGLILVTGPTGSGKSTTLAGMIDYINKNEYGHILTVED
PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGTPAIRNLIREDKVAQMYSSIQTGQQYGMQTLDQHL
QDLVKRSLITRNQAREYAKDKRIFE

Sequences:

>Translated_345_residues
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDYEEFLEVDFSFEIPSLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLIDQPQGLILVTGPTGSGKSTTLAGMIDYINKNEYGHILTVED
PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGTPAIRNLIREDKVAQMYSSIQTGQQYGMQTLDQHL
QDLVKRSLITRNQAREYAKDKRIFE
>Mature_345_residues
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDYEEFLEVDFSFEIPSLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLIDQPQGLILVTGPTGSGKSTTLAGMIDYINKNEYGHILTVED
PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGTPAIRNLIREDKVAQMYSSIQTGQQYGMQTLDQHL
QDLVKRSLITRNQAREYAKDKRIFE

Specific function: May be involved in pilus retraction [H]

COG id: COG2805

COG function: function code NU; Tfp pilus assembly protein, pilus retraction ATPase PilT

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=324, Percent_Identity=48.7654320987654, Blast_Score=299, Evalue=2e-82,
Organism=Escherichia coli, GI1786296, Length=306, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1789723, Length=291, Percent_Identity=36.0824742268041, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 38644; Mature: 38644

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQR
CCHHHHHHHHHHCCCCCEEECCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCHHC
RDYEEFLEVDFSFEIPSLARFRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLID
CCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCHHHHEEHHHCCCCHHHHHHHC
QPQGLILVTGPTGSGKSTTLAGMIDYINKNEYGHILTVEDPIEFVHTSQKCLINQREVHR
CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCHHHHHCHHHHHH
DTHGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
HHCHHHHHHHHHHHCCCCEEEEECCCCHHHHHEEEEECCCCCEEEEEEECCHHHHHHHHH
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGTPAIRNLIREDKVAQ
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
MYSSIQTGQQYGMQTLDQHLQDLVKRSLITRNQAREYAKDKRIFE
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQR
CCHHHHHHHHHHCCCCCEEECCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCHHC
RDYEEFLEVDFSFEIPSLARFRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLID
CCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCHHHHEEHHHCCCCHHHHHHHC
QPQGLILVTGPTGSGKSTTLAGMIDYINKNEYGHILTVEDPIEFVHTSQKCLINQREVHR
CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCHHHHHCHHHHHH
DTHGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
HHCHHHHHHHHHHHCCCCEEEEECCCCHHHHHEEEEECCCCCEEEEEEECCHHHHHHHHH
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGTPAIRNLIREDKVAQ
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
MYSSIQTGQQYGMQTLDQHLQDLVKRSLITRNQAREYAKDKRIFE
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1676385; 10984043 [H]