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The map label for this gene is 78048555

Identifier: 78048555

GI number: 78048555

Start: 3410125

End: 3410595

Strand: Reverse

Name: 78048555

Synonym: XCV2999

Alternate gene names: NA

Gene position: 3410595-3410125 (Counterclockwise)

Preceding gene: 78048557

Following gene: 78048552

Centisome position: 65.86

GC content: 67.09

Gene sequence:

>471_bases
ATGAATCTGTTCGCGACTGCAATGTCGTTGTCGATGATGGCCGCCGTGGTTCCTGATGAGGCCGCGAGACCGATCAGGGT
GAGCAAGGCGGGTGGGGCGCCGTCGGCAGTGGGGTCGGCCGAGTATTTCACCAGCAAGGTGCGCATCGATGCACCGTTCC
AGGCCGAAGCACCGGCACGCGTCGGCGGCGCCACCGTCACCTTCGAGCCGGGCGCGCGCACCGCATGGCATACCCATCCG
CTGGGCCAGACGTTGATCGTGACCGCCGGCGCCGGGCGCGTGCAGGAGTGGGGCAAGCCGGCGCAGCAGATCCGCCCGGG
CGATATCGTGTGGATTCCGCCCGGCGTCAAGCATTGGCACGGTGCCAATGCCAACGTGGCGATGACGCATATCGCCATTG
CCGAATCGCAGGACGGCACGCCCGTCAGCTGGCTGGAGCAGGTGAGCGAGGCGCAATATGCGGCCGAGTAG

Upstream 100 bases:

>100_bases
GGATTGATGCGCCGTGTTTCTAGGAGCATGCGCGGTTAGCCGGTTAGTGGCCTCGGACAAGCGCGCTACAGTTCGAACAC
TCGAATCAAGGAGCACTGCA

Downstream 100 bases:

>100_bases
ACAGCGGTGATGCCGATGCTGGCGCGGTGATGATGCCGCCTCGGCGTGAGTGGACGCTGCGGCGGATTGCCGGGGCCGCT
GCGCCGCCCGCGCTGCGCCC

Product: putative secreted protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Family Protein; Cupin Region; Cupin Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Double-Stranded Beta-Helix-Like Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Double-Stranded Beta-Helix Protein; Secreted Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNLFATAMSLSMMAAVVPDEAARPIRVSKAGGAPSAVGSAEYFTSKVRIDAPFQAEAPARVGGATVTFEPGARTAWHTHP
LGQTLIVTAGAGRVQEWGKPAQQIRPGDIVWIPPGVKHWHGANANVAMTHIAIAESQDGTPVSWLEQVSEAQYAAE

Sequences:

>Translated_156_residues
MNLFATAMSLSMMAAVVPDEAARPIRVSKAGGAPSAVGSAEYFTSKVRIDAPFQAEAPARVGGATVTFEPGARTAWHTHP
LGQTLIVTAGAGRVQEWGKPAQQIRPGDIVWIPPGVKHWHGANANVAMTHIAIAESQDGTPVSWLEQVSEAQYAAE
>Mature_156_residues
MNLFATAMSLSMMAAVVPDEAARPIRVSKAGGAPSAVGSAEYFTSKVRIDAPFQAEAPARVGGATVTFEPGARTAWHTHP
LGQTLIVTAGAGRVQEWGKPAQQIRPGDIVWIPPGVKHWHGANANVAMTHIAIAESQDGTPVSWLEQVSEAQYAAE

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16410; Mature: 16410

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFATAMSLSMMAAVVPDEAARPIRVSKAGGAPSAVGSAEYFTSKVRIDAPFQAEAPAR
CCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCCCCC
VGGATVTFEPGARTAWHTHPLGQTLIVTAGAGRVQEWGKPAQQIRPGDIVWIPPGVKHWH
CCCEEEEECCCCCCCEECCCCCCEEEEEECCCCHHHHCCHHHHCCCCCEEEECCCCCCCC
GANANVAMTHIAIAESQDGTPVSWLEQVSEAQYAAE
CCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLFATAMSLSMMAAVVPDEAARPIRVSKAGGAPSAVGSAEYFTSKVRIDAPFQAEAPAR
CCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCCCCC
VGGATVTFEPGARTAWHTHPLGQTLIVTAGAGRVQEWGKPAQQIRPGDIVWIPPGVKHWH
CCCEEEEECCCCCCCEECCCCCCEEEEEECCCCHHHHCCHHHHCCCCCEEEECCCCCCCC
GANANVAMTHIAIAESQDGTPVSWLEQVSEAQYAAE
CCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA