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The map label for this gene is petA [H]

Identifier: 78048190

GI number: 78048190

Start: 2969368

End: 2970012

Strand: Reverse

Name: petA [H]

Synonym: XCV2634

Alternate gene names: 78048190

Gene position: 2970012-2969368 (Counterclockwise)

Preceding gene: 78048191

Following gene: 78048189

Centisome position: 57.35

GC content: 62.02

Gene sequence:

>645_bases
ATGGCCAACGATGGGGTTAACGCACCTGCTGATATCGGGCGTCGTCGGTTTTTAACCGCGACAACGGCCGTGGTCGGTGC
GGTCGGAGCAGGATTCGTTGCAGTTCCGTTCGTGAAGTCGTGGAATCCCAGTGCGCGTGCCAAGTTGGCTGGCGCACCGG
TCACCGCCGACATCAGCGCCTTGCAGGAAGGCCAGCGCATGGTCCTTGAATGGCGCGGTCAGCCAATCTGGATCGTCAAG
CGCTCCAAGGCCATGCTCGACGCACTCCCGTCGCTGGACGACCGGCTCAAGGACCCCAAGTCCGAGAACAAGGATCAGCA
GCCGGAGTACGTGCTGAAAAACCCGGAATATCGCTCGATCAAGTCCGACATTTCGGTGCTGGTGGGGCTTTGTACGCATC
TGGGTTGTTCGCCGGAGATGGTCGCCGAAATCCGCCCCGAGCCTTACGACCCGCAGTGGAAGGGCGGTTACTTCTGCCCT
TGCCACAAGTCGCGCTTCGACATGTCCGGCCGCGTCTTCGACGGCGTGCCGGCACCGATCAATCTGCTGGTGCCCCCACA
CCACTACGTGGACGACAACACCTTGGTGATCGGCGTCGATCCTGACGATGCCGGTGCGTCGGCCAAAACCACGGGGGCTG
CCTGA

Upstream 100 bases:

>100_bases
TGCATTAAGCGTTCCGCTACACTGCGGTCGATTCATCGCGGCTGGACCCCCCGCCAGCCGTTGGCAGCCTCACGCTACCT
AATCAAGATCGGAGAGCCGG

Downstream 100 bases:

>100_bases
TGAGCAATGTTCTGGTCCGTACCGCCAACGGCGTGTTCGATTGGGTCAACGAGCGCGCGCCCGGGCTGATGCCCATGTAC
CGCAAGCACATCAGCGAGTA

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MANDGVNAPADIGRRRFLTATTAVVGAVGAGFVAVPFVKSWNPSARAKLAGAPVTADISALQEGQRMVLEWRGQPIWIVK
RSKAMLDALPSLDDRLKDPKSENKDQQPEYVLKNPEYRSIKSDISVLVGLCTHLGCSPEMVAEIRPEPYDPQWKGGYFCP
CHKSRFDMSGRVFDGVPAPINLLVPPHHYVDDNTLVIGVDPDDAGASAKTTGAA

Sequences:

>Translated_214_residues
MANDGVNAPADIGRRRFLTATTAVVGAVGAGFVAVPFVKSWNPSARAKLAGAPVTADISALQEGQRMVLEWRGQPIWIVK
RSKAMLDALPSLDDRLKDPKSENKDQQPEYVLKNPEYRSIKSDISVLVGLCTHLGCSPEMVAEIRPEPYDPQWKGGYFCP
CHKSRFDMSGRVFDGVPAPINLLVPPHHYVDDNTLVIGVDPDDAGASAKTTGAA
>Mature_213_residues
ANDGVNAPADIGRRRFLTATTAVVGAVGAGFVAVPFVKSWNPSARAKLAGAPVTADISALQEGQRMVLEWRGQPIWIVKR
SKAMLDALPSLDDRLKDPKSENKDQQPEYVLKNPEYRSIKSDISVLVGLCTHLGCSPEMVAEIRPEPYDPQWKGGYFCPC
HKSRFDMSGRVFDGVPAPINLLVPPHHYVDDNTLVIGVDPDDAGASAKTTGAA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=194, Percent_Identity=31.9587628865979, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17540418, Length=172, Percent_Identity=34.8837209302326, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6320811, Length=193, Percent_Identity=31.6062176165803, Blast_Score=96, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24580896, Length=165, Percent_Identity=36.3636363636364, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 23138; Mature: 23006

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDGVNAPADIGRRRFLTATTAVVGAVGAGFVAVPFVKSWNPSARAKLAGAPVTADISA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECEEECCCCCCCEEECCCCCCHHHHH
LQEGQRMVLEWRGQPIWIVKRSKAMLDALPSLDDRLKDPKSENKDQQPEYVLKNPEYRSI
HHHCCEEEEEECCCEEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCCCCEEECCCCHHHH
KSDISVLVGLCTHLGCSPEMVAEIRPEPYDPQWKGGYFCPCHKSRFDMSGRVFDGVPAPI
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCE
NLLVPPHHYVDDNTLVIGVDPDDAGASAKTTGAA
EEEECCCCEECCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANDGVNAPADIGRRRFLTATTAVVGAVGAGFVAVPFVKSWNPSARAKLAGAPVTADISA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECEEECCCCCCCEEECCCCCCHHHHH
LQEGQRMVLEWRGQPIWIVKRSKAMLDALPSLDDRLKDPKSENKDQQPEYVLKNPEYRSI
HHHCCEEEEEECCCEEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCCCCEEECCCCHHHH
KSDISVLVGLCTHLGCSPEMVAEIRPEPYDPQWKGGYFCPCHKSRFDMSGRVFDGVPAPI
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCEECCCCCCE
NLLVPPHHYVDDNTLVIGVDPDDAGASAKTTGAA
EEEECCCCEECCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA