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The map label for this gene is trg [H]

Identifier: 78048181

GI number: 78048181

Start: 2957444

End: 2959102

Strand: Reverse

Name: trg [H]

Synonym: XCV2625

Alternate gene names: 78048181

Gene position: 2959102-2957444 (Counterclockwise)

Preceding gene: 78048183

Following gene: 78048180

Centisome position: 57.14

GC content: 65.04

Gene sequence:

>1659_bases
ATGTTAGGCAACTTCAGAATCGGAACCAGACTGATCGTGGCATTCCTGATCGTCTCGGCCATCGGCGCATGCATCGGGTG
GGTGGGCTATTCCAACTCAGGCCGCATCAGCGCGCTGTCGACGTCGTTGTACGAGCGCGAGTTGCTCGGCATGTCCCATG
TCAAGGAAGCCAACATCAACCTCATCTATGCCGGCCGCGCGCGCGCCAACCTGTTGTTGGCCAGCAGTGCAGAAGAGCGC
CAGTCGCATGTGCAGAACATCGACAAATACACCGCCAAGGTGGTCGATCACATGGCCCGTGCGCGGGAGAGCTTCCAGAG
CGAGGAAGGCAAGAACAAGCTGGCGCAATTCGATCGCGCCTGGCAGAAGTATCTGGACGAGCGCGGCCGCTTCATCGAAG
TCGCCAACCGCGAAGCGTTGCGCGAGGCCAATCCGGAACTGGCCGCGCTCTCGCGCGCGGTACGCGCCAGCTCGGACGAA
GTGGATAACCTGATGACCGACCTGAGCGGCCTGCGCGAGCGCAGCGCCGCGGCGGCCAACGCCGAAGCCGATGCGATCCA
CACACGCAGTTCCAGGCTGTTGGTCGCCATCATCTGCAGCGGCGTGTTGCTCGGTGCCATTCTCGGCGTGGTGATCAGCC
GCAGCGTCACCGGGCCGATCCGCCGCGCGGTGGCGGTGGCCAACGGTTTGTCGGAAGGCGATCTCACCATGCGCATCGAT
GTGCATGGCCGCGACGAAACCGCGCAACTGCTCGAAGCGATGCGCACCATGGTGCAAAAGTTGTCGCAGGTGGTCGGCGA
GGTCAATACCAGTGCCGAAACCCTTGCCAGCGCGTCGGAAGAAGTCAGCGCCACCGCGCAGTCGCTGTCGCAGGCGGCCA
GCGAACAGGCCGCCGGTGTGGAAGAAACCAGTGCGTCGCTGGAGCAGATGACCGCATCGATCAGCCAGAACACCGAGAAC
GCGCGCATCACCGATGGCATGGCCACCCAGGCCGCGAAAGAAACCGTGGAAGGTGGCGAAGCGGTGGTGGCCACCACCCA
GGCGATGAAGCAGATCGCGCAGAAGATCGGCATCATCGACGACATCGCGTACCAGACCAACCTGCTTGCGCTCAATGCCG
CGATCGAAGCCGCACGCGCCGGCGAACATGGCAAGGGGTTTGCCGTCGTCGCCGCCGAGGTGCGCAAGCTGGCCGAACGC
AGCCAGGTGGCGGCGCAGGAAATCGGCGAGGTGGCCAGTTCCAGCGTGGAATTGGCCGACCGCGCCGGTCGTTTGCTGGA
TTCGATCGTACCCATCATCAAGCGCACCTCCGACCTGGTGCAGGAAATTTCCGCCGCCTCCGAGGAGCAATCTTCCGGCG
TCAGCCAGATCAATTCGGCGGTCGTGCAGTTGAGCCAGACCACGCAGCAGAACGCCAGCGCATCCGAAGAGCTGGCCGCC
ACTGCCGAGGAAATGAGCGCGCAGGCCGAACAGCTGCAGCAGAGCATGGCGTTCTTCCGGCTGGGCGGGCAGGGCGCGCC
GCCTGCGCCGCCCAAGCGCGGCAAGCAGGTCGCTGCGCGTCCGGCGCGTGCGGCGGGCACGCGTGGCTGGCGCAGCAACG
CAGCGCCGGCGTATGCGATGTCCGAGGGCCCGGACGAAGGCCAGTTCGCGCGTTTCTGA

Upstream 100 bases:

>100_bases
GATGGGTTAGACCCGCCGTATCGCCATGCGCGGTACGCGCAGCGCCATCGCCTTCCTGTAGCGCATGTCGCCCACGCATC
CTTCTTGAGAGAACTCCCCA

Downstream 100 bases:

>100_bases
GAGAGCGACCAATGACCGCACCGACGCTTGATGTGATGCCCGGCGACGCCGATGTCGCCGCGCAATATCTGACCTTTCAA
CTGGATGGCGAAACCTTCGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MLGNFRIGTRLIVAFLIVSAIGACIGWVGYSNSGRISALSTSLYERELLGMSHVKEANINLIYAGRARANLLLASSAEER
QSHVQNIDKYTAKVVDHMARARESFQSEEGKNKLAQFDRAWQKYLDERGRFIEVANREALREANPELAALSRAVRASSDE
VDNLMTDLSGLRERSAAAANAEADAIHTRSSRLLVAIICSGVLLGAILGVVISRSVTGPIRRAVAVANGLSEGDLTMRID
VHGRDETAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSLSQAASEQAAGVEETSASLEQMTASISQNTEN
ARITDGMATQAAKETVEGGEAVVATTQAMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAER
SQVAAQEIGEVASSSVELADRAGRLLDSIVPIIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
TAEEMSAQAEQLQQSMAFFRLGGQGAPPAPPKRGKQVAARPARAAGTRGWRSNAAPAYAMSEGPDEGQFARF

Sequences:

>Translated_552_residues
MLGNFRIGTRLIVAFLIVSAIGACIGWVGYSNSGRISALSTSLYERELLGMSHVKEANINLIYAGRARANLLLASSAEER
QSHVQNIDKYTAKVVDHMARARESFQSEEGKNKLAQFDRAWQKYLDERGRFIEVANREALREANPELAALSRAVRASSDE
VDNLMTDLSGLRERSAAAANAEADAIHTRSSRLLVAIICSGVLLGAILGVVISRSVTGPIRRAVAVANGLSEGDLTMRID
VHGRDETAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSLSQAASEQAAGVEETSASLEQMTASISQNTEN
ARITDGMATQAAKETVEGGEAVVATTQAMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAER
SQVAAQEIGEVASSSVELADRAGRLLDSIVPIIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
TAEEMSAQAEQLQQSMAFFRLGGQGAPPAPPKRGKQVAARPARAAGTRGWRSNAAPAYAMSEGPDEGQFARF
>Mature_552_residues
MLGNFRIGTRLIVAFLIVSAIGACIGWVGYSNSGRISALSTSLYERELLGMSHVKEANINLIYAGRARANLLLASSAEER
QSHVQNIDKYTAKVVDHMARARESFQSEEGKNKLAQFDRAWQKYLDERGRFIEVANREALREANPELAALSRAVRASSDE
VDNLMTDLSGLRERSAAAANAEADAIHTRSSRLLVAIICSGVLLGAILGVVISRSVTGPIRRAVAVANGLSEGDLTMRID
VHGRDETAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSLSQAASEQAAGVEETSASLEQMTASISQNTEN
ARITDGMATQAAKETVEGGEAVVATTQAMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAER
SQVAAQEIGEVASSSVELADRAGRLLDSIVPIIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
TAEEMSAQAEQLQQSMAFFRLGGQGAPPAPPKRGKQVAARPARAAGTRGWRSNAAPAYAMSEGPDEGQFARF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=377, Percent_Identity=36.8700265251989, Blast_Score=213, Evalue=3e-56,
Organism=Escherichia coli, GI2367378, Length=358, Percent_Identity=38.5474860335196, Blast_Score=201, Evalue=9e-53,
Organism=Escherichia coli, GI1788194, Length=288, Percent_Identity=41.6666666666667, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1788195, Length=325, Percent_Identity=38.1538461538462, Blast_Score=187, Evalue=2e-48,
Organism=Escherichia coli, GI1789453, Length=337, Percent_Identity=34.7181008902077, Blast_Score=154, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58508; Mature: 58508

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNFRIGTRLIVAFLIVSAIGACIGWVGYSNSGRISALSTSLYERELLGMSHVKEANIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
LIYAGRARANLLLASSAEERQSHVQNIDKYTAKVVDHMARARESFQSEEGKNKLAQFDRA
EEEECCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQKYLDERGRFIEVANREALREANPELAALSRAVRASSDEVDNLMTDLSGLRERSAAAAN
HHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
AEADAIHTRSSRLLVAIICSGVLLGAILGVVISRSVTGPIRRAVAVANGLSEGDLTMRID
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEE
VHGRDETAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSLSQAASEQAAGV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EETSASLEQMTASISQNTENARITDGMATQAAKETVEGGEAVVATTQAMKQIAQKIGIID
HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHH
DIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGEVASSSVELAD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGRLLDSIVPIIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
TAEEMSAQAEQLQQSMAFFRLGGQGAPPAPPKRGKQVAARPARAAGTRGWRSNAAPAYAM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCC
SEGPDEGQFARF
CCCCCCCCCCCC
>Mature Secondary Structure
MLGNFRIGTRLIVAFLIVSAIGACIGWVGYSNSGRISALSTSLYERELLGMSHVKEANIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
LIYAGRARANLLLASSAEERQSHVQNIDKYTAKVVDHMARARESFQSEEGKNKLAQFDRA
EEEECCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQKYLDERGRFIEVANREALREANPELAALSRAVRASSDEVDNLMTDLSGLRERSAAAAN
HHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
AEADAIHTRSSRLLVAIICSGVLLGAILGVVISRSVTGPIRRAVAVANGLSEGDLTMRID
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEE
VHGRDETAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSLSQAASEQAAGV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EETSASLEQMTASISQNTENARITDGMATQAAKETVEGGEAVVATTQAMKQIAQKIGIID
HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHH
DIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGEVASSSVELAD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGRLLDSIVPIIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
TAEEMSAQAEQLQQSMAFFRLGGQGAPPAPPKRGKQVAARPARAAGTRGWRSNAAPAYAM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCC
SEGPDEGQFARF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]