| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048157
Identifier: 78048157
GI number: 78048157
Start: 2930952
End: 2931887
Strand: Reverse
Name: 78048157
Synonym: XCV2601
Alternate gene names: NA
Gene position: 2931887-2930952 (Counterclockwise)
Preceding gene: 78048158
Following gene: 78048156
Centisome position: 56.62
GC content: 65.81
Gene sequence:
>936_bases ATGGCAGTGCACGGGGGGAAGGGCTGGCTGCTCGGCATGCTGGTCGCAGCGGCGTTATTCGGTTGCGGGCGCGATGCGCC ACCGCCGGCTGCGCCGGTCGCACTCGACAAGACATTTCTGGCCGACACCGCCGCCTGGCGCGAAGCGCGGCTGAAGGAAC TGCGCGCGCCCGATGGCTGGACCAGCCTGGTTGGCCTGCATTGGCTGTCGCTGAAGGCGCATTACATCGGCAGCAGCGCC GACAGCGGTATCAGACTCGCGGTAGGCCCACCGAAGATGGGCATGGTGTCCACGGAGAACAACGCGGTCTGGTTCGTGCC CGAGCGTGGTGCCGCGCTGACCCTCGATGGCAAGCCGCTGACCAGCCGGATCCGCTTCCAGTCCGATCGCGATCCGCAGC CCACCCTGATCCATTTCGACGAGGGCAAGGGCGTGTTGAGCCTGATCCATCGCGGCGACCGGTATGCGCTACGGGTCAAG CATGCCGACGCGAGCTCGCGCACGCACTTCGCGGGTCTGGACTATTGGCCCGTGGATCCATCCTGGCGCATCAACGCGCG CTATGTGCCCAACTCCGTCGGCAAGACCATCCCGATCGTCGACATCGTCGGGATCAGCAGCGAGCAGCCGAACGCGGGCG CGATCGAGTTCGAGCTCGACGGCAAGACCTACCGATTGGAAACCATCGGCGAGCCAGGGCGGCCGATGTTCGTGGTATTC GCCGACCGCACCAGCGGTCACGGCAGCTATCCGGCTGGACGTTTTCTGGATCTGGACGTGCCCGATGCCTCGGGGCATGT CATCGTCGATTTCAACCGCGCCTACAACCCACCATGCGCGTTCACCCCATTCGCCACCTGCCCACTGCCGCCGCCGGAAA ACCGCATCGATCTGGCGGTGTCGGCAGGCGAGAAGGCCTACAAGGTGCCGCACTGA
Upstream 100 bases:
>100_bases TGGAAGCCACCGAACGCTCGGGCCAGTGCAACCATGGCCGACCGACCTGGGCGCGGTTTACGCTGAGCGATATCGATCGT TGGTTTCTGAGGGGGCGTTG
Downstream 100 bases:
>100_bases CATGCGCGCCATTCACATGTGCGGAGAAGCCTGGTGACCGGGCGACGGACCACGTTGACGCGCCAGCGGATTGCCACCTG GTGCAGCAGCGCGCTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAVHGGKGWLLGMLVAAALFGCGRDAPPPAAPVALDKTFLADTAAWREARLKELRAPDGWTSLVGLHWLSLKAHYIGSSA DSGIRLAVGPPKMGMVSTENNAVWFVPERGAALTLDGKPLTSRIRFQSDRDPQPTLIHFDEGKGVLSLIHRGDRYALRVK HADASSRTHFAGLDYWPVDPSWRINARYVPNSVGKTIPIVDIVGISSEQPNAGAIEFELDGKTYRLETIGEPGRPMFVVF ADRTSGHGSYPAGRFLDLDVPDASGHVIVDFNRAYNPPCAFTPFATCPLPPPENRIDLAVSAGEKAYKVPH
Sequences:
>Translated_311_residues MAVHGGKGWLLGMLVAAALFGCGRDAPPPAAPVALDKTFLADTAAWREARLKELRAPDGWTSLVGLHWLSLKAHYIGSSA DSGIRLAVGPPKMGMVSTENNAVWFVPERGAALTLDGKPLTSRIRFQSDRDPQPTLIHFDEGKGVLSLIHRGDRYALRVK HADASSRTHFAGLDYWPVDPSWRINARYVPNSVGKTIPIVDIVGISSEQPNAGAIEFELDGKTYRLETIGEPGRPMFVVF ADRTSGHGSYPAGRFLDLDVPDASGHVIVDFNRAYNPPCAFTPFATCPLPPPENRIDLAVSAGEKAYKVPH >Mature_310_residues AVHGGKGWLLGMLVAAALFGCGRDAPPPAAPVALDKTFLADTAAWREARLKELRAPDGWTSLVGLHWLSLKAHYIGSSAD SGIRLAVGPPKMGMVSTENNAVWFVPERGAALTLDGKPLTSRIRFQSDRDPQPTLIHFDEGKGVLSLIHRGDRYALRVKH ADASSRTHFAGLDYWPVDPSWRINARYVPNSVGKTIPIVDIVGISSEQPNAGAIEFELDGKTYRLETIGEPGRPMFVVFA DRTSGHGSYPAGRFLDLDVPDASGHVIVDFNRAYNPPCAFTPFATCPLPPPENRIDLAVSAGEKAYKVPH
Specific function: Unknown
COG id: COG3358
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33711; Mature: 33579
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHGGKGWLLGMLVAAALFGCGRDAPPPAAPVALDKTFLADTAAWREARLKELRAPDGW CEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCH TSLVGLHWLSLKAHYIGSSADSGIRLAVGPPKMGMVSTENNAVWFVPERGAALTLDGKPL HHHHHEEEEEEEEEECCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCCCEEEECCCCC TSRIRFQSDRDPQPTLIHFDEGKGVLSLIHRGDRYALRVKHADASSRTHFAGLDYWPVDP CEEEEECCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEEECCCCCCCEECCCEEECCCC SWRINARYVPNSVGKTIPIVDIVGISSEQPNAGAIEFELDGKTYRLETIGEPGRPMFVVF CEEEEEEECCCCCCCEECEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEE ADRTSGHGSYPAGRFLDLDVPDASGHVIVDFNRAYNPPCAFTPFATCPLPPPENRIDLAV EECCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE SAGEKAYKVPH ECCCCEECCCC >Mature Secondary Structure AVHGGKGWLLGMLVAAALFGCGRDAPPPAAPVALDKTFLADTAAWREARLKELRAPDGW EEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCH TSLVGLHWLSLKAHYIGSSADSGIRLAVGPPKMGMVSTENNAVWFVPERGAALTLDGKPL HHHHHEEEEEEEEEECCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCCCEEEECCCCC TSRIRFQSDRDPQPTLIHFDEGKGVLSLIHRGDRYALRVKHADASSRTHFAGLDYWPVDP CEEEEECCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEEECCCCCCCEECCCEEECCCC SWRINARYVPNSVGKTIPIVDIVGISSEQPNAGAIEFELDGKTYRLETIGEPGRPMFVVF CEEEEEEECCCCCCCEECEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEE ADRTSGHGSYPAGRFLDLDVPDASGHVIVDFNRAYNPPCAFTPFATCPLPPPENRIDLAV EECCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE SAGEKAYKVPH ECCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA