| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048136
Identifier: 78048136
GI number: 78048136
Start: 2908453
End: 2909382
Strand: Reverse
Name: 78048136
Synonym: XCV2580
Alternate gene names: NA
Gene position: 2909382-2908453 (Counterclockwise)
Preceding gene: 78048137
Following gene: 78048135
Centisome position: 56.18
GC content: 65.91
Gene sequence:
>930_bases GTGTCCGTTTTGCGCGGTCTACGATGGTGTCTGATTGCCTGCTGGCTGATTGCCGGGGCAGGCTTGGCCGTGACGGCTGC GGCAGCGCCTTCCTCGGTCCTGGTGCTTGGACGGATCAGCGATGATCCCGCCAGCCATTACGAGCAGCTCAAGCCCTTGC TGGATTACGTGGTGCCGCGCATGCGCGAGGTCGGGATCCGCCGCGGCGAAATCCTGATGGCGCCCGATGCGCGCCAGATG TCCAGCTATCTGCGGCGCGGCCGGGTCGATTGGGTCAGCGAAACGACCGGTGCGGCGATGCTGCTGGAACAGCGCGGCAG CGCGCATCCCTTGCTCATGACCGAGCGTGGCGGACTGCGCGACTTCCACACGGTGTTCTTCGTGCGCCGCGACAGCCCGA TCCAGTCGCTGTCGCAGTTGCGCGGCCATACCCTGGCATTGCAGAACGCCTCGTCCACCAGCGGCTACCTGCTACCGGTG CTCGAACTGCTGCGCAACGGCATCGCATGCGATGTGCTGCTGTCGGCCGACGACACCCCGGCACGCGGATCGGCCGGCTA TCTGATGGTGGGGTCGAAATTGAACGTTGCCGCGTTCGTGCACAAACATCTGATCGACGTGGGCGCGCTCAGCAACGTCG ATTGGGACGACGAACGCCACATGCCACCGGTGTTCAAGCGCGACTTCCGCATCGTGCACCGCACTGCGCCGGTGCCGCGC GCGGTGGAAATGGTGCGCGCAGGAATGGACCCGGCCGTGGAGCAGCGTCTGCGGGTGGTGTTGCTGCAGGCCGCCTCCGA CCCCAAGGCGGGCCCGGCGCTGAAGCGCTTTTTCGACACTACCGGGTTCCATCCGCTGGATCCCGCTAGCCGCCGACGTC TGCAAGAGTTGAGCGCGGGCGTGCAACGCGTCATGGATCACGTGGAATGA
Upstream 100 bases:
>100_bases GTCCGATGCGCAGCGCATGGCCATGCTTGCCAAGCAGGCCGGAAACTGACGTCTGTCACATCTTCAAAGATTCGGCTAGG CTGTCCGCGGCTCTAGGGGA
Downstream 100 bases:
>100_bases CTCAGGTGCGCTTCGGCTTGCAGGCACGCTTTCTCCTGGTGATGGCGCTGACGCTGCTGCTGGTCGGTGCGATCCTGGCT TCGCTGCTGCAGCGACAAAG
Product: putative secreted protein
Products: NA
Alternate protein names: Alkylphosphonate ABC Tranporter
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSVLRGLRWCLIACWLIAGAGLAVTAAAAPSSVLVLGRISDDPASHYEQLKPLLDYVVPRMREVGIRRGEILMAPDARQM SSYLRRGRVDWVSETTGAAMLLEQRGSAHPLLMTERGGLRDFHTVFFVRRDSPIQSLSQLRGHTLALQNASSTSGYLLPV LELLRNGIACDVLLSADDTPARGSAGYLMVGSKLNVAAFVHKHLIDVGALSNVDWDDERHMPPVFKRDFRIVHRTAPVPR AVEMVRAGMDPAVEQRLRVVLLQAASDPKAGPALKRFFDTTGFHPLDPASRRRLQELSAGVQRVMDHVE
Sequences:
>Translated_309_residues MSVLRGLRWCLIACWLIAGAGLAVTAAAAPSSVLVLGRISDDPASHYEQLKPLLDYVVPRMREVGIRRGEILMAPDARQM SSYLRRGRVDWVSETTGAAMLLEQRGSAHPLLMTERGGLRDFHTVFFVRRDSPIQSLSQLRGHTLALQNASSTSGYLLPV LELLRNGIACDVLLSADDTPARGSAGYLMVGSKLNVAAFVHKHLIDVGALSNVDWDDERHMPPVFKRDFRIVHRTAPVPR AVEMVRAGMDPAVEQRLRVVLLQAASDPKAGPALKRFFDTTGFHPLDPASRRRLQELSAGVQRVMDHVE >Mature_308_residues SVLRGLRWCLIACWLIAGAGLAVTAAAAPSSVLVLGRISDDPASHYEQLKPLLDYVVPRMREVGIRRGEILMAPDARQMS SYLRRGRVDWVSETTGAAMLLEQRGSAHPLLMTERGGLRDFHTVFFVRRDSPIQSLSQLRGHTLALQNASSTSGYLLPVL ELLRNGIACDVLLSADDTPARGSAGYLMVGSKLNVAAFVHKHLIDVGALSNVDWDDERHMPPVFKRDFRIVHRTAPVPRA VEMVRAGMDPAVEQRLRVVLLQAASDPKAGPALKRFFDTTGFHPLDPASRRRLQELSAGVQRVMDHVE
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34067; Mature: 33936
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLRGLRWCLIACWLIAGAGLAVTAAAAPSSVLVLGRISDDPASHYEQLKPLLDYVVPR CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH MREVGIRRGEILMAPDARQMSSYLRRGRVDWVSETTGAAMLLEQRGSAHPLLMTERGGLR HHHHCCCCCCEEECCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCEEEECCCCCC DFHTVFFVRRDSPIQSLSQLRGHTLALQNASSTSGYLLPVLELLRNGIACDVLLSADDTP CEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC ARGSAGYLMVGSKLNVAAFVHKHLIDVGALSNVDWDDERHMPPVFKRDFRIVHRTAPVPR CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH AVEMVRAGMDPAVEQRLRVVLLQAASDPKAGPALKRFFDTTGFHPLDPASRRRLQELSAG HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VQRVMDHVE HHHHHHHCC >Mature Secondary Structure SVLRGLRWCLIACWLIAGAGLAVTAAAAPSSVLVLGRISDDPASHYEQLKPLLDYVVPR HHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH MREVGIRRGEILMAPDARQMSSYLRRGRVDWVSETTGAAMLLEQRGSAHPLLMTERGGLR HHHHCCCCCCEEECCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCEEEECCCCCC DFHTVFFVRRDSPIQSLSQLRGHTLALQNASSTSGYLLPVLELLRNGIACDVLLSADDTP CEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC ARGSAGYLMVGSKLNVAAFVHKHLIDVGALSNVDWDDERHMPPVFKRDFRIVHRTAPVPR CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH AVEMVRAGMDPAVEQRLRVVLLQAASDPKAGPALKRFFDTTGFHPLDPASRRRLQELSAG HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VQRVMDHVE HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA