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The map label for this gene is cbbZ [C]

Identifier: 78048129

GI number: 78048129

Start: 2900673

End: 2901365

Strand: Reverse

Name: cbbZ [C]

Synonym: XCV2573

Alternate gene names: 78048129

Gene position: 2901365-2900673 (Counterclockwise)

Preceding gene: 78048130

Following gene: 78048128

Centisome position: 56.03

GC content: 66.23

Gene sequence:

>693_bases
ATGCAGTTGCAGGCCCGTGGCGCTGTGGTGAGTTTCCCGCGCACGGTGTTGTTCGATCTGGATGGCACCTTGCTGGACAG
CGCGCCGGACATGCTCGCGACAGTCAACGGGATGCTGGATGCGCGTGGGCGTGCGCCAGTTGCATTGGCTTCGCTTCGCC
CGGTGGTTTCCAAAGGTGCGCGTGCGATGCTCGGCGTGGCCTTTGCCGAGCTCGATGCCGCGGCGTGCGCGGCGCTGGTG
CCGGAATTCCTGCAGCGCTACGAAGGCCTGATCGGCACGCAATCGCAGCTGTTCGATGGCATCGAACAGATGCTGGCGCG
GCTGGAGGATGCCGGCTGCGTGTGGGGTATCGTCACCAACAAGCCCGAATATCTGGCACGCCTGATCCTGCCGCAGTTGG
GCTGGGAGCAGCGCTGCGCGGTGCTGATCGGTGGCGACACGCTGGCCGAGCGCAAGCCGCATCCGTTGCCGCTGGTGATA
GCCGCAGAACGCATCGGCGTTGCACCTGCGCAATGCGTGTATGTGGGCGACGATGAGCGCGACATCGTGGCTGCGCGCGC
GGCGGCGATGGCGTCGGTCGCGGCGTTGTGGGGCTATCGTCTGGACGACGACGACCCGACGCACTGGCAGGCCGATGTGC
TGGTCGAGCAGCCGCAGGCACTTTGGAATGCGGCAACGTGGCCGCAGATCTGA

Upstream 100 bases:

>100_bases
GCGGTGAAGCCGTGATGGGCGGGGATTCGGGAATCGGGAATCGGGAATCGCAAAGGCGGTTGGCTGAGGGTTTGAGATTT
TCTCGTTTCGGGTGGAGTGC

Downstream 100 bases:

>100_bases
TCTTTCTTCGTATTTTTCCGGAACCGCCATGAGCCAATCCAGCGCGCTCGACAGTTTTCTCGACAAGTGGGCAACCCGCT
GGCCGGAATGGTCGGTTGCC

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MQLQARGAVVSFPRTVLFDLDGTLLDSAPDMLATVNGMLDARGRAPVALASLRPVVSKGARAMLGVAFAELDAAACAALV
PEFLQRYEGLIGTQSQLFDGIEQMLARLEDAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLVI
AAERIGVAPAQCVYVGDDERDIVAARAAAMASVAALWGYRLDDDDPTHWQADVLVEQPQALWNAATWPQI

Sequences:

>Translated_230_residues
MQLQARGAVVSFPRTVLFDLDGTLLDSAPDMLATVNGMLDARGRAPVALASLRPVVSKGARAMLGVAFAELDAAACAALV
PEFLQRYEGLIGTQSQLFDGIEQMLARLEDAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLVI
AAERIGVAPAQCVYVGDDERDIVAARAAAMASVAALWGYRLDDDDPTHWQADVLVEQPQALWNAATWPQI
>Mature_230_residues
MQLQARGAVVSFPRTVLFDLDGTLLDSAPDMLATVNGMLDARGRAPVALASLRPVVSKGARAMLGVAFAELDAAACAALV
PEFLQRYEGLIGTQSQLFDGIEQMLARLEDAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLVI
AAERIGVAPAQCVYVGDDERDIVAARAAAMASVAALWGYRLDDDDPTHWQADVLVEQPQALWNAATWPQI

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=210, Percent_Identity=34.2857142857143, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24755; Mature: 24755

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQARGAVVSFPRTVLFDLDGTLLDSAPDMLATVNGMLDARGRAPVALASLRPVVSKGA
CCCCCCCCEEECCCEEEEECCCHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCH
RAMLGVAFAELDAAACAALVPEFLQRYEGLIGTQSQLFDGIEQMLARLEDAGCVWGIVTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
KPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLVIAAERIGVAPAQCVYVGDDER
CHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCEEEEEHHHCCCCCCEEEEECCCCH
DIVAARAAAMASVAALWGYRLDDDDPTHWQADVLVEQPQALWNAATWPQI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MQLQARGAVVSFPRTVLFDLDGTLLDSAPDMLATVNGMLDARGRAPVALASLRPVVSKGA
CCCCCCCCEEECCCEEEEECCCHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCH
RAMLGVAFAELDAAACAALVPEFLQRYEGLIGTQSQLFDGIEQMLARLEDAGCVWGIVTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
KPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLVIAAERIGVAPAQCVYVGDDER
CHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCEEEEEHHHCCCCCCEEEEECCCCH
DIVAARAAAMASVAALWGYRLDDDDPTHWQADVLVEQPQALWNAATWPQI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA