| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is galU [H]
Identifier: 78048046
GI number: 78048046
Start: 2810887
End: 2811780
Strand: Reverse
Name: galU [H]
Synonym: XCV2490
Alternate gene names: 78048046
Gene position: 2811780-2810887 (Counterclockwise)
Preceding gene: 78048047
Following gene: 78048045
Centisome position: 54.3
GC content: 62.3
Gene sequence:
>894_bases ATGAGCCAGCGTATTCGCAAGGCCGTATTCCCCGTCGCAGGTCTTGGGACCCGCTTTCTTCCGGCAACCAAGACAGTGCC GAAAGAAATGCTGCCAATCATCGACAAGCCATTGATCCAGTACGCCGTCGACGAAGCCATCCAGGCTGGTTGCGATACGC TGATCTTCGTTACCAACCGCTACAAGCACTCCATTGCCGACTACTTCGACAAAGCCTATGAGCTCGAGCAGAAGCTGGAG CGCGCAGGCAAGCTGGAGCAGCTGGAGCTGGTGCGCCATGCATTGCCCGAGGGCGTCCGCGCCATTTTTGTCACGCAGGC AGAGGCGCTTGGCCTGGGCCATGCGGTGTTGTGTGCCAAGGCCGTTGTCGGTGACGAGCCGTTCGCGGTGTTGCTGCCGG ACGATCTGATGTGGAACCGCGGCGATGCTGCGCTGACCCAGATGGCCAATGTGGCCGAGGCCTCGGGCGGCAGCGTGATC GCCGTGGAAGACGTGCCGCACGACAAGACCGCCAGCTACGGCATCGTTTCCACCGACGCGTTCGACGGCCGCAAGGGCCG CATCAACGCGATCGTCGAAAAGCCCAAGCCGGAAGTCGCGCCAAGCAACCTGGCCGTGGTCGGTCGTTACGTGCTGAGCC CCAAGATCTTCGACCTGCTCGAAGCCACCGGTGCAGGCGCGGGCGGCGAAATCCAGCTTACCGATGCGATTGCCGAGTTG CTGAAGGAAGAGCAGGTCGATGCCTTCCGTTTCGAAGGTCGCCGTTTCGATTGCGGCGCGCACATCGGCCTGATCGAAGC CACCGTGCATTTCGCGCTTGAGCACGAAAAGCATGGCGGCCCAGCGAAGGAAATCCTGCGCAATGCACTGGCCCAGGCCG ACGCGCGCGGCTGA
Upstream 100 bases:
>100_bases TGGGTAGCCTGATGCCGGATTTCGCGGCTGCTCGACGGAAAGTCGACGCGCGATCTGATACGGTCGTTCCATTCCCCGCA CGTGAGGTCAGAAGACTGTA
Downstream 100 bases:
>100_bases GTGTTGCCTGATCGCTGTTTCCACGAACGACGCCAGCTGGCGTCGTTCGTCGTTTAGGGGCTTGCCGTATGCTTTGCCGC GCCGGCAGAGCTCGGCTTGG
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase 2; UDP-glucose pyrophosphorylase 2; UDPGP 2; Uridine diphosphoglucose pyrophosphorylase 2 [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLE RAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAKAVVGDEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVI AVEDVPHDKTASYGIVSTDAFDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG
Sequences:
>Translated_297_residues MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLE RAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAKAVVGDEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVI AVEDVPHDKTASYGIVSTDAFDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG >Mature_296_residues SQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLER AGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAKAVVGDEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVIA VEDVPHDKTASYGIVSTDAFDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAELL KEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. a glycolipid found in the membrane, which is also used as a membrane anchor for lipote
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=299, Percent_Identity=47.1571906354515, Blast_Score=244, Evalue=3e-66, Organism=Escherichia coli, GI1788355, Length=297, Percent_Identity=42.4242424242424, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1788351, Length=285, Percent_Identity=25.9649122807018, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1790224, Length=277, Percent_Identity=25.2707581227437, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI133931050, Length=255, Percent_Identity=30.5882352941176, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320148, Length=298, Percent_Identity=25.8389261744966, Blast_Score=73, Evalue=7e-14, Organism=Drosophila melanogaster, GI21355443, Length=257, Percent_Identity=25.2918287937743, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644084, Length=257, Percent_Identity=25.2918287937743, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32074; Mature: 31943
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNR CCHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH YKHSIADYFDKAYELEQKLERAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHH AVVGDEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVIAVEDVPHDKTASYGIVSTDA HHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCC FDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHH LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG HHHHCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNR CHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH YKHSIADYFDKAYELEQKLERAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHH AVVGDEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVIAVEDVPHDKTASYGIVSTDA HHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCC FDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHH LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG HHHHCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA