| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is kefB [H]
Identifier: 78048045
GI number: 78048045
Start: 2808863
End: 2810713
Strand: Reverse
Name: kefB [H]
Synonym: XCV2489
Alternate gene names: 78048045
Gene position: 2810713-2808863 (Counterclockwise)
Preceding gene: 78048046
Following gene: 78048043
Centisome position: 54.28
GC content: 64.99
Gene sequence:
>1851_bases ATGAGCCAACCTGCCGAATCCAGTGAGCTGATCAACGTGGTAGTGCTGCTCGGCGCTGCCGTGGTGGCAATCCCGTTGTT CCGTCGTCTGGGCCTGGGCTCGGTGTTGGGTTATCTGGCGGCGGGACTGGCAATTGGTCCGTTCGGGTTGGGCCTGTTCA ACGAGCCGCAAGCCATCCTGCATGTGGCCGAGTTGGGCGTGGTGATGTTTCTGTTCGTGATCGGGCTGGAAATGCGCCCC TCGCACCTGTGGAGTTTGCGCAAGGAAATCTTCGGACTCGGCACGCTGCAGATCGCGGTCTGCGCGCTGGTGTTGACCGG CGTCGGCATGTTGCTCGGCTTTGCGCTACCGGTGGCCTTCGTGGCGGCGTCCGGTTTCGTGCTGACATCCACTGCCGTGG TGATGCAGCTCTTGGCAGAGCGTGGCGACGTCGCCTTGCCGCCGGGGCAGAAGATCGTGGCGATCCTGCTGTTCGAAGAC CTGTTGATCGTGCCGTTGCTGGCGATCGTGGCCTGGATGGGAGCCAGCGGCGACCCGCAGGCGGCATCGCAGCGTTGGCA GGGAATCGGCATCGGTCTGGCCTGCATCGTCGGCTTGCTGGCGGCCGGGCGTTGGCTGCTCAATCCCTTGTTCCGCATCC TGGCCGCATCCAAGGCGCGCGAGGTGATGACGGCAGCGGCATTGCTGGTGGTGCTGGGCGCCGCGCTGTTGATGCAGGTG GGCGGGCTGTCGATGGCGATGGGGGCGTTCCTGGCCGGCGTGCTGTTGTCCGAGTCCACGTTCCGGCATCAGATCGAAGC GGATATCGAACCTTTTCGCGGCATCCTGCTGGGGCTGTTTTTTCTCGGTGTCGGCATGAGCCTGGACTTGCGCGTGGTGG CGGCGGACTGGCGCCTGATCGTGGTGGGCGTGCTGGCCCTGATGGTGGGCAAGGGCGTGTGCATCTATGCGGTGGCGCGG CTGATGCGCAGCGACCATCGCCAGGCGCTGGACCGTGGTGTGTTGATGGCGCAAGGCGGCGAATTCGCATTCGTGCTGTT TGCCGCCGCGTCGGCATCCGGCGTCATCGATGCCCAGGTCAATGCCAGCCTGACCGCGATCGTGGTGTTGTCGATGGCAC TGACGCCATTGTTCGTGCTGCTGCAACGGCGGCTGACGCCGGCGGCGGCGGTCTCGCTGGATGGCGTGGAAGCAGCCAGT GGCCAGACCGGCAGCGTGTTGATCATCGGCTTCGGGCGCTTTGGACAGGTGGCCAGTCAGTCGCTGCTGGCGCGCGACGT GGATGTGACCATCATCGATAACGACATCGAGATGATCCAGAGCGCGGAAGAATTTGGTTTCAAGATCTACTACGGCGACG GCACCCGGCTCGATGTGTTGCACGCCTCCGGCGCGCACAGCGCACGTGCGATTGCGGTGTGCGTCGACAACCAGGAGGCG GCCAATCGCATCGTCGAGCTGGCAACGCGCGAGTTCCCGCATGCCAAGCTGCTGGTGCGTTCGTACGACCGCCAGCATTC GCTGCAGTTGGTCGCTGCGGGAGTGGATTACCAGATCCGCGAGACCTTCGAGTCGGCGGTGCTCTTCGGCAAAGTGGCGC TGGTGGAGCTGGGGGTGGACGAGGACGAAGCCGGCATGATTTCGCGTCAGATCCGCCGCCGCGATGCCGAGCGTTTCGAA CTGGAGATTGCTGCCGGCGATGCACGCGCCGGAGCCAAGCTGATGTATGGCAACACCGTGCCGACCGCGCCCCGGCCCAC GCCGTTCACGCGGCCGCGTCGCGGCAGCCGCACGTTGAATCCCGATGCGGTGCCGCAGGCTGAGCCAGCAGAGACACAGA CGCGCGACTAA
Upstream 100 bases:
>100_bases TTGCCGCGCCGGCAGAGCTCGGCTTGGCAAGCCCAAGCGGGGACGAAGATGCGCACCCTGATGCAGGCTGGGGCCGCGCA AGTGCCGCCAGAATCCGGGC
Downstream 100 bases:
>100_bases GGGCGGCCCACAAACCGCTGCGCAGGCGCTCCGCGGCATGGCCAGTGCGCGATGCGGTGCGCCAGTCGTCCGGCGCGATA GCCGCGATTGGACGACTGCT
Product: glutathione-regulated potassium efflux protein B
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MSQPAESSELINVVVLLGAAVVAIPLFRRLGLGSVLGYLAAGLAIGPFGLGLFNEPQAILHVAELGVVMFLFVIGLEMRP SHLWSLRKEIFGLGTLQIAVCALVLTGVGMLLGFALPVAFVAASGFVLTSTAVVMQLLAERGDVALPPGQKIVAILLFED LLIVPLLAIVAWMGASGDPQAASQRWQGIGIGLACIVGLLAAGRWLLNPLFRILAASKAREVMTAAALLVVLGAALLMQV GGLSMAMGAFLAGVLLSESTFRHQIEADIEPFRGILLGLFFLGVGMSLDLRVVAADWRLIVVGVLALMVGKGVCIYAVAR LMRSDHRQALDRGVLMAQGGEFAFVLFAAASASGVIDAQVNASLTAIVVLSMALTPLFVLLQRRLTPAAAVSLDGVEAAS GQTGSVLIIGFGRFGQVASQSLLARDVDVTIIDNDIEMIQSAEEFGFKIYYGDGTRLDVLHASGAHSARAIAVCVDNQEA ANRIVELATREFPHAKLLVRSYDRQHSLQLVAAGVDYQIRETFESAVLFGKVALVELGVDEDEAGMISRQIRRRDAERFE LEIAAGDARAGAKLMYGNTVPTAPRPTPFTRPRRGSRTLNPDAVPQAEPAETQTRD
Sequences:
>Translated_616_residues MSQPAESSELINVVVLLGAAVVAIPLFRRLGLGSVLGYLAAGLAIGPFGLGLFNEPQAILHVAELGVVMFLFVIGLEMRP SHLWSLRKEIFGLGTLQIAVCALVLTGVGMLLGFALPVAFVAASGFVLTSTAVVMQLLAERGDVALPPGQKIVAILLFED LLIVPLLAIVAWMGASGDPQAASQRWQGIGIGLACIVGLLAAGRWLLNPLFRILAASKAREVMTAAALLVVLGAALLMQV GGLSMAMGAFLAGVLLSESTFRHQIEADIEPFRGILLGLFFLGVGMSLDLRVVAADWRLIVVGVLALMVGKGVCIYAVAR LMRSDHRQALDRGVLMAQGGEFAFVLFAAASASGVIDAQVNASLTAIVVLSMALTPLFVLLQRRLTPAAAVSLDGVEAAS GQTGSVLIIGFGRFGQVASQSLLARDVDVTIIDNDIEMIQSAEEFGFKIYYGDGTRLDVLHASGAHSARAIAVCVDNQEA ANRIVELATREFPHAKLLVRSYDRQHSLQLVAAGVDYQIRETFESAVLFGKVALVELGVDEDEAGMISRQIRRRDAERFE LEIAAGDARAGAKLMYGNTVPTAPRPTPFTRPRRGSRTLNPDAVPQAEPAETQTRD >Mature_615_residues SQPAESSELINVVVLLGAAVVAIPLFRRLGLGSVLGYLAAGLAIGPFGLGLFNEPQAILHVAELGVVMFLFVIGLEMRPS HLWSLRKEIFGLGTLQIAVCALVLTGVGMLLGFALPVAFVAASGFVLTSTAVVMQLLAERGDVALPPGQKIVAILLFEDL LIVPLLAIVAWMGASGDPQAASQRWQGIGIGLACIVGLLAAGRWLLNPLFRILAASKAREVMTAAALLVVLGAALLMQVG GLSMAMGAFLAGVLLSESTFRHQIEADIEPFRGILLGLFFLGVGMSLDLRVVAADWRLIVVGVLALMVGKGVCIYAVARL MRSDHRQALDRGVLMAQGGEFAFVLFAAASASGVIDAQVNASLTAIVVLSMALTPLFVLLQRRLTPAAAVSLDGVEAASG QTGSVLIIGFGRFGQVASQSLLARDVDVTIIDNDIEMIQSAEEFGFKIYYGDGTRLDVLHASGAHSARAIAVCVDNQEAA NRIVELATREFPHAKLLVRSYDRQHSLQLVAAGVDYQIRETFESAVLFGKVALVELGVDEDEAGMISRQIRRRDAERFEL EIAAGDARAGAKLMYGNTVPTAPRPTPFTRPRRGSRTLNPDAVPQAEPAETQTRD
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=387, Percent_Identity=25.0645994832041, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1789749, Length=557, Percent_Identity=42.7289048473968, Blast_Score=393, Evalue=1e-110, Organism=Escherichia coli, GI1786232, Length=572, Percent_Identity=39.1608391608392, Blast_Score=391, Evalue=1e-110, Organism=Escherichia coli, GI1786685, Length=498, Percent_Identity=28.714859437751, Blast_Score=143, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 65317; Mature: 65185
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00664 VINCULIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPAESSELINVVVLLGAAVVAIPLFRRLGLGSVLGYLAAGLAIGPFGLGLFNEPQAIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH HVAELGVVMFLFVIGLEMRPSHLWSLRKEIFGLGTLQIAVCALVLTGVGMLLGFALPVAF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAASGFVLTSTAVVMQLLAERGDVALPPGQKIVAILLFEDLLIVPLLAIVAWMGASGDPQ HHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AASQRWQGIGIGLACIVGLLAAGRWLLNPLFRILAASKAREVMTAAALLVVLGAALLMQV HHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLSMAMGAFLAGVLLSESTFRHQIEADIEPFRGILLGLFFLGVGMSLDLRVVAADWRLI CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH VVGVLALMVGKGVCIYAVARLMRSDHRQALDRGVLMAQGGEFAFVLFAAASASGVIDAQV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCEEEEC NASLTAIVVLSMALTPLFVLLQRRLTPAAAVSLDGVEAASGQTGSVLIIGFGRFGQVASQ CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCEEEEECCCHHHHHHH SLLARDVDVTIIDNDIEMIQSAEEFGFKIYYGDGTRLDVLHASGAHSARAIAVCVDNQEA HHHHCCCEEEEECCHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCHHH ANRIVELATREFPHAKLLVRSYDRQHSLQLVAAGVDYQIRETFESAVLFGKVALVELGVD HHHHHHHHHHCCCHHHHHHHHHCCHHCEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCC EDEAGMISRQIRRRDAERFELEIAAGDARAGAKLMYGNTVPTAPRPTPFTRPRRGSRTLN CCHHHHHHHHHHHCCCHHEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC PDAVPQAEPAETQTRD CCCCCCCCCCCCCCCC >Mature Secondary Structure SQPAESSELINVVVLLGAAVVAIPLFRRLGLGSVLGYLAAGLAIGPFGLGLFNEPQAIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH HVAELGVVMFLFVIGLEMRPSHLWSLRKEIFGLGTLQIAVCALVLTGVGMLLGFALPVAF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAASGFVLTSTAVVMQLLAERGDVALPPGQKIVAILLFEDLLIVPLLAIVAWMGASGDPQ HHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AASQRWQGIGIGLACIVGLLAAGRWLLNPLFRILAASKAREVMTAAALLVVLGAALLMQV HHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLSMAMGAFLAGVLLSESTFRHQIEADIEPFRGILLGLFFLGVGMSLDLRVVAADWRLI CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH VVGVLALMVGKGVCIYAVARLMRSDHRQALDRGVLMAQGGEFAFVLFAAASASGVIDAQV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCEEEEC NASLTAIVVLSMALTPLFVLLQRRLTPAAAVSLDGVEAASGQTGSVLIIGFGRFGQVASQ CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCEEEEECCCHHHHHHH SLLARDVDVTIIDNDIEMIQSAEEFGFKIYYGDGTRLDVLHASGAHSARAIAVCVDNQEA HHHHCCCEEEEECCHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCHHH ANRIVELATREFPHAKLLVRSYDRQHSLQLVAAGVDYQIRETFESAVLFGKVALVELGVD HHHHHHHHHHCCCHHHHHHHHHCCHHCEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCC EDEAGMISRQIRRRDAERFELEIAAGDARAGAKLMYGNTVPTAPRPTPFTRPRRGSRTLN CCHHHHHHHHHHHCCCHHEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC PDAVPQAEPAETQTRD CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]