| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is guaB [H]
Identifier: 78048042
GI number: 78048042
Start: 2805672
End: 2807129
Strand: Reverse
Name: guaB [H]
Synonym: XCV2486
Alternate gene names: 78048042
Gene position: 2807129-2805672 (Counterclockwise)
Preceding gene: 78048043
Following gene: 78048041
Centisome position: 54.21
GC content: 64.54
Gene sequence:
>1458_bases ATGCTACGCATCCAGGCTGAAGCTCTCACCTACGACGACGTTTCGCTCGTCCCCGCTCATTCGATCGTCCTGCCCAAGGA CGTCAGCCTGGAAACCCGGCTGACGCGCGACCTGCGCCTGAAACTGCCGATTCTGTCGGCGGCAATGGACACAGTGACCG AACACCGTCTTGCGGTGGCCATGGCCCAGCTGGGCGGCATCGGCATCATCCACAAGAACCTGACCCCGCAGCAGCAAGCC GGCGAAGTGGCACGGGTCAAGAAGTTCGAATCCGGCGTGATCACCGAGCCGTTCACCGTCAGCCCCGACACGACCATCGG CGAAGTGCTGGCACTGACGCGCGCGCGCAACATCTCCGGCGTGCCGGTGGTGGATGGCAGCGAACTGGTCGGTATCGTCA CCAGCCGCGACATGCGCTTCGAAAAGAAGCTCGACGATCCGGTCCGGCACATCATGACCAAGAAGGACCGCCTGATTACC GTGCGCGAAGGCGCCAGCGATGAGGAAGTGCTCGAGCTGCTGCATCGCAACCGGATCGAAAAGGTCCTGGTGGTCAACGA CAGCTTCGAGCTGCGCGGCCTGATCACGGTCAAGGACATCCAGAAGAAGACCGACAACCCCAATGCCGCCAAGGACAGCG CCAAGCGTTTGCTGGTGGGCGCGGCGGTGGGCGTGGGCGGCGATACCGAGCAGCGCATCGAGCTGCTTGCCGCAGCCGGC GTGGACGTGGTGATTGTCGATACCGCGCATGGCCATTCGCAGGGCGTGATCGATCGCGTGGCTTGGGTCAAGAAGACCTA TCCGCAGTTGCAGGTGATCGGCGGCAACATCGTCACCGGCGATGCGGCATTGGCGTTGATGGATGCCGGTGCGGACGCGG TCAAGGTCGGCGTGGGCCCGGGTTCGATCTGCACCACGCGAGTGGTTGCCGGCGTGGGCGTGCCGCAGATCACTGCGGTG GACATGGTGGCCGAAGCGCTGCAGGACCGCATCCCCTTGATTGCCGATGGCGGCATCCGCTATTCCGGCGACATCGGCAA GGCGCTGGTGGCCGGTGCCTCGACGGTGATGGTCGGCGGCCTGTTGGCCGGTACCGAAGAAGCGCCGGGCGAGGTCGAAC TGTTCCAGGGCCGCAGCTACAAGAGCTACCGCGGCATGGGTAGCCTGGGTGCGATGGAAAAGGGGTCCAAGGACCGCTAC TTCCAGGATGCCTCCGATGCCGACAAGCTGGTTCCCGAAGGCATCGAGGGCCGCGTGCCGTATCGCGGGCCGGTCGGCGG CATCATCCATCAGCTCATCGGTGGCCTGCGCGCGACCATGGGCTACGTGGGCTGCGCCACCATCGAAGACATGCGGACCA AGCCCAAGTTCGTCAAGATCACTGGCGCCGGCCAGCGCGAAAGCCACGTGCACGACGTGCAGATCATCAAAGAGCCGCCG AACTATCGCGCCGGCTAA
Upstream 100 bases:
>100_bases AACGGCGGACGGTGCAGGGCGCGCTGTTGCGAATCCCGACTCCCCCATCCTGGCCCCAATGCGTTAAAATGCCGCGCTTC CCCAAAACTCGGGTCCGCCG
Downstream 100 bases:
>100_bases CCGGGAATGGGGAATCGCGAATCGGGAATCGTAAGAGCCCGCCGCCTCCTCATCCGATAGCGGTCGGCGCTGCGTTTGCT GTTTCGATTCCCTCATCCCG
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQA GEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEDMRTKPKFVKITGAGQRESHVHDVQIIKEPP NYRAG
Sequences:
>Translated_485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQA GEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEDMRTKPKFVKITGAGQRESHVHDVQIIKEPP NYRAG >Mature_485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQA GEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEDMRTKPKFVKITGAGQRESHVHDVQIIKEPP NYRAG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=485, Percent_Identity=44.5360824742268, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=485, Percent_Identity=44.5360824742268, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI34328930, Length=485, Percent_Identity=44.5360824742268, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI156616279, Length=485, Percent_Identity=44.5360824742268, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=43.4782608695652, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI217035152, Length=474, Percent_Identity=44.5147679324894, Blast_Score=354, Evalue=9e-98, Organism=Homo sapiens, GI217035148, Length=485, Percent_Identity=43.9175257731959, Blast_Score=353, Evalue=1e-97, Organism=Homo sapiens, GI217035150, Length=485, Percent_Identity=41.4432989690722, Blast_Score=320, Evalue=2e-87, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI156104880, Length=261, Percent_Identity=36.3984674329502, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=63.0390143737166, Blast_Score=570, Evalue=1e-164, Organism=Escherichia coli, GI1786293, Length=267, Percent_Identity=34.0823970037453, Blast_Score=149, Evalue=5e-37, Organism=Caenorhabditis elegans, GI71994385, Length=503, Percent_Identity=39.5626242544732, Blast_Score=310, Evalue=1e-84, Organism=Caenorhabditis elegans, GI71994389, Length=421, Percent_Identity=42.0427553444181, Blast_Score=291, Evalue=7e-79, Organism=Caenorhabditis elegans, GI17560440, Length=255, Percent_Identity=33.3333333333333, Blast_Score=157, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=487, Percent_Identity=40.041067761807, Blast_Score=335, Evalue=1e-92, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=40.1656314699793, Blast_Score=335, Evalue=1e-92, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=40.1656314699793, Blast_Score=322, Evalue=6e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=40.2366863905325, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6319353, Length=141, Percent_Identity=36.8794326241135, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641071, Length=481, Percent_Identity=42.2037422037422, Blast_Score=346, Evalue=2e-95, Organism=Drosophila melanogaster, GI24641073, Length=481, Percent_Identity=42.2037422037422, Blast_Score=346, Evalue=2e-95, Organism=Drosophila melanogaster, GI28571163, Length=439, Percent_Identity=43.0523917995444, Blast_Score=316, Evalue=2e-86,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51685; Mature: 51685
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCEEECCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPQQQAGEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISG HHHHCCEEEEECCCCCHHHHCHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEECCCEEEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATIEDMRTKPKFVKITGAGQRESHVHDVQIIKEPP CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCC NYRAG CCCCC >Mature Secondary Structure MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCEEECCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPQQQAGEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISG HHHHCCEEEEECCCCCHHHHCHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEECCCEEEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATIEDMRTKPKFVKITGAGQRESHVHDVQIIKEPP CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCC NYRAG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA