| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is phhB [H]
Identifier: 78047984
GI number: 78047984
Start: 2755887
End: 2756243
Strand: Reverse
Name: phhB [H]
Synonym: XCV2428
Alternate gene names: 78047984
Gene position: 2756243-2755887 (Counterclockwise)
Preceding gene: 78047987
Following gene: 78047983
Centisome position: 53.23
GC content: 65.27
Gene sequence:
>357_bases ATGACCGATCTGATTCCCCTGGAGCAGGCCCACTGCCTCCCGCGCAAAGGCAGCGACCACAAGCTGGGCGAGGCGCGCCT GACCGAGCTGCTGCCACAGGTGCCCGGCTGGGAGCTGGCCGAGGCCGGCATGGCGCTCACGCGCACGTTCCGCTTCGCCG ACTATTACCGCACCCTGGCCTTTGTGAATGCGCTGGCCTGGATCGCCCATCGCGAAGACCACCATCCCGACCTGGGCGTG CATTACGACCGCGTCGTGGTGCGCTATTCCACCCATGACGTGGGCGGACTGAGCGAAAACGACTTCATCTGCGCGGCCAA GACCGCGCAGCTCTACGATCAGGGAATCACTGCATGA
Upstream 100 bases:
>100_bases TATCTGGATCATGCGGGTTATTCTACCGCCCAAAGCGCCCTCGCTCATGGAACACCGTGATCCTGGTGGGCGCGCTGTCC GCCACCCCTGCGAGACCGTC
Downstream 100 bases:
>100_bases ACATGTATCGCGCCGCGTTCGCCGGCCTCGTCGTCGCCACCGGCCTTGCTGGCTGCGGCAAGTCGCCACAGCAGGCCGCC GCGCCCACCGTCGCGCCCAC
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTDLIPLEQAHCLPRKGSDHKLGEARLTELLPQVPGWELAEAGMALTRTFRFADYYRTLAFVNALAWIAHREDHHPDLGV HYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA
Sequences:
>Translated_118_residues MTDLIPLEQAHCLPRKGSDHKLGEARLTELLPQVPGWELAEAGMALTRTFRFADYYRTLAFVNALAWIAHREDHHPDLGV HYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA >Mature_117_residues TDLIPLEQAHCLPRKGSDHKLGEARLTELLPQVPGWELAEAGMALTRTFRFADYYRTLAFVNALAWIAHREDHHPDLGVH YDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 13276; Mature: 13145
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLIPLEQAHCLPRKGSDHKLGEARLTELLPQVPGWELAEAGMALTRTFRFADYYRTLA CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVNALAWIAHREDHHPDLGVHYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA HHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCC >Mature Secondary Structure TDLIPLEQAHCLPRKGSDHKLGEARLTELLPQVPGWELAEAGMALTRTFRFADYYRTLA CCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVNALAWIAHREDHHPDLGVHYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA HHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]