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The map label for this gene is tonB [H]

Identifier: 78047983

GI number: 78047983

Start: 2755468

End: 2755890

Strand: Reverse

Name: tonB [H]

Synonym: XCV2427

Alternate gene names: 78047983

Gene position: 2755890-2755468 (Counterclockwise)

Preceding gene: 78047984

Following gene: 78047982

Centisome position: 53.22

GC content: 72.1

Gene sequence:

>423_bases
ATGAACATGTATCGCGCCGCGTTCGCCGGCCTCGTCGTCGCCACCGGCCTTGCTGGCTGCGGCAAGTCGCCACAGCAGGC
CGCCGCGCCCACCGTCGCGCCCACCGAGCTGGCTGCCCTGAAGACGCCACCGCCGGAATATTCGCCGCAGCTGGCCTGCG
CCGGTGTGGGCGGCACGACCGTGCTGCGGGTCGTGGTCGGCACCCAGGGCACGCCGACCGATGTCTCGGTGGCACAGAGC
AGCGGCCAGCCCGTGCTCGACGAAGCGGCCCGGACGCGCGTGCGCGAGTGGCAGTTCAAGGCCGCCACCCGCAATGGCCA
GGCCGTGCCGCAGACCATCCAGGTGCCGGTCTCGTTCAAGCCGCCGGTGCCGCGTCCGAACGAATGTTTCGCCATCGAGG
AACGCGCACGCCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
TCGTGGTGCGCTATTCCACCCATGACGTGGGCGGACTGAGCGAAAACGACTTCATCTGCGCGGCCAAGACCGCGCAGCTC
TACGATCAGGGAATCACTGC

Downstream 100 bases:

>100_bases
GGACAGCGCAGGTCGGTGACGCCTTATTCCTGCACGGCACAAGCGCATCGACACCAGCGCATGAGCAACAGCGCCTTGTT
CGCGCGCTTGAGTGTCGCCC

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNMYRAAFAGLVVATGLAGCGKSPQQAAAPTVAPTELAALKTPPPEYSPQLACAGVGGTTVLRVVVGTQGTPTDVSVAQS
SGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFKPPVPRPNECFAIEERARRGG

Sequences:

>Translated_140_residues
MNMYRAAFAGLVVATGLAGCGKSPQQAAAPTVAPTELAALKTPPPEYSPQLACAGVGGTTVLRVVVGTQGTPTDVSVAQS
SGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFKPPVPRPNECFAIEERARRGG
>Mature_140_residues
MNMYRAAFAGLVVATGLAGCGKSPQQAAAPTVAPTELAALKTPPPEYSPQLACAGVGGTTVLRVVVGTQGTPTDVSVAQS
SGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFKPPVPRPNECFAIEERARRGG

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 14555; Mature: 14555

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMYRAAFAGLVVATGLAGCGKSPQQAAAPTVAPTELAALKTPPPEYSPQLACAGVGGTT
CCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCCEEEECCCHHH
VLRVVVGTQGTPTDVSVAQSSGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFK
EEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
PPVPRPNECFAIEERARRGG
CCCCCCCCEEEHHHHHHCCC
>Mature Secondary Structure
MNMYRAAFAGLVVATGLAGCGKSPQQAAAPTVAPTELAALKTPPPEYSPQLACAGVGGTT
CCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCCEEEECCCHHH
VLRVVVGTQGTPTDVSVAQSSGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFK
EEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
PPVPRPNECFAIEERARRGG
CCCCCCCCEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]