Click here to switch to the map view.

The map label for this gene is 78047939

Identifier: 78047939

GI number: 78047939

Start: 2709660

End: 2710748

Strand: Reverse

Name: 78047939

Synonym: XCV2383

Alternate gene names: NA

Gene position: 2710748-2709660 (Counterclockwise)

Preceding gene: 78047940

Following gene: 78047938

Centisome position: 52.35

GC content: 62.99

Gene sequence:

>1089_bases
ATGGGGCTGCACGCACCCTATGGGTCGCATGCAGTCGAAGGCATGCCACGCGCAGCAACCGAGACCAGGGGAGAATCAGT
CCGGCTCATTCCTTGGAAAACACTGCCGGTGGTACTGATGTTGTCCTGCGCACCGGCGCTGGCAGTGAATGTGGCACCTG
CCACCGACGTGTCGGCGCAAATATTCATCAACGCCAGCCAGCTCGACCGAGGCGACGTGACCAGCGCCGACGAAGACCCG
GCGCTGGATCTGAAGCGCACTTTTATTACCCTTGACCATCGCTTCAACCAGAATTGGTCAGCGCAGGTAACGACCGACGT
GCAGTGGCTGCGCAACGACGATCCGAGCGACGTGTGGCTGCGCCATGCCTACCTGCAGCGCAGCTTCGGCAAGGGCCGCT
GGCTGCGTCTGGGTAATGCGCCGACGGCATGGATTCAACAGGAGTCAATGCGTGAAGGCTACCGCTACATCGATGCCGGC
CTGATCGCACGTACCAAGATGGGCGCACCGGCAGACTACGGAGCGCACGTCCAGTATGTGCGTGGGGATTTCACCTATGC
CGCATCGATCGTGACCGGCGCGGGCTTCCAGCGACCTCGCCTGGGCAAGCGGGCCGATGTTGAGATGAGGCTCGGCTGGA
CGCCAGGCAAACGCCTAGAGCTGGCAGTGGGCGGTTACCGCGGCACCCGCGCCCAGGATGCCGGTCACAAACCGCGCGAG
CACACCGCGCGGCGCTGGAATGCCATGGCCAGTTGGGTCGGCGAACGTGGACGCATCGGCGGGCAGTATTTCCACGCCGA
CAATTGGACCCGGGTCACCAAGCCCGGTGACGATGACCAGCGTGGATGGTCGGCATGGGCGAGCCACCAGATCACCCCTC
GGTATGCGCTGTTCACCCGCCACGACATGACTCGCATGAGCCTGGACATCGACCCACGCATGCAGGAGCGTTACCACGTG
ATCGGTGTGGAGTGGAAACCCAATCGTCACCTGCGTCTGGCAGCAGTAGGCAAGCGCGTGCTGCAGGAGATGGCGAACGT
GCGGATAGAGAGTCACGAGGCAGGCTTGTGGACGCAACTCGCATTCTGA

Upstream 100 bases:

>100_bases
TTCACCCACATGGATCGCCCGGATTTTGCGCCCAAGGGTAAGGACTGGCCCAACGATAAGAAGCCCGCTGATGCGCGCTA
TTAAGGGTGTTGATAGACAT

Downstream 100 bases:

>100_bases
ACAGACGATCATGACCCACCGCTGGCGCAGGGCTTCTGATCCACCCGACATGGCTTCTGTCCTAGGGGAGCGACCCGGCC
GTCACTAACGGCATGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MGLHAPYGSHAVEGMPRAATETRGESVRLIPWKTLPVVLMLSCAPALAVNVAPATDVSAQIFINASQLDRGDVTSADEDP
ALDLKRTFITLDHRFNQNWSAQVTTDVQWLRNDDPSDVWLRHAYLQRSFGKGRWLRLGNAPTAWIQQESMREGYRYIDAG
LIARTKMGAPADYGAHVQYVRGDFTYAASIVTGAGFQRPRLGKRADVEMRLGWTPGKRLELAVGGYRGTRAQDAGHKPRE
HTARRWNAMASWVGERGRIGGQYFHADNWTRVTKPGDDDQRGWSAWASHQITPRYALFTRHDMTRMSLDIDPRMQERYHV
IGVEWKPNRHLRLAAVGKRVLQEMANVRIESHEAGLWTQLAF

Sequences:

>Translated_362_residues
MGLHAPYGSHAVEGMPRAATETRGESVRLIPWKTLPVVLMLSCAPALAVNVAPATDVSAQIFINASQLDRGDVTSADEDP
ALDLKRTFITLDHRFNQNWSAQVTTDVQWLRNDDPSDVWLRHAYLQRSFGKGRWLRLGNAPTAWIQQESMREGYRYIDAG
LIARTKMGAPADYGAHVQYVRGDFTYAASIVTGAGFQRPRLGKRADVEMRLGWTPGKRLELAVGGYRGTRAQDAGHKPRE
HTARRWNAMASWVGERGRIGGQYFHADNWTRVTKPGDDDQRGWSAWASHQITPRYALFTRHDMTRMSLDIDPRMQERYHV
IGVEWKPNRHLRLAAVGKRVLQEMANVRIESHEAGLWTQLAF
>Mature_361_residues
GLHAPYGSHAVEGMPRAATETRGESVRLIPWKTLPVVLMLSCAPALAVNVAPATDVSAQIFINASQLDRGDVTSADEDPA
LDLKRTFITLDHRFNQNWSAQVTTDVQWLRNDDPSDVWLRHAYLQRSFGKGRWLRLGNAPTAWIQQESMREGYRYIDAGL
IARTKMGAPADYGAHVQYVRGDFTYAASIVTGAGFQRPRLGKRADVEMRLGWTPGKRLELAVGGYRGTRAQDAGHKPREH
TARRWNAMASWVGERGRIGGQYFHADNWTRVTKPGDDDQRGWSAWASHQITPRYALFTRHDMTRMSLDIDPRMQERYHVI
GVEWKPNRHLRLAAVGKRVLQEMANVRIESHEAGLWTQLAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40952; Mature: 40821

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLHAPYGSHAVEGMPRAATETRGESVRLIPWKTLPVVLMLSCAPALAVNVAPATDVSAQ
CCCCCCCCCHHHCCCCCCHHHCCCCEEEEEECCHHHHHHHHHCCCHHEEECCCCCCCCEE
IFINASQLDRGDVTSADEDPALDLKRTFITLDHRFNQNWSAQVTTDVQWLRNDDPSDVWL
EEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCEECCCCCHHHHH
RHAYLQRSFGKGRWLRLGNAPTAWIQQESMREGYRYIDAGLIARTKMGAPADYGAHVQYV
HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEE
RGDFTYAASIVTGAGFQRPRLGKRADVEMRLGWTPGKRLELAVGGYRGTRAQDAGHKPRE
ECCCEEEEHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHH
HTARRWNAMASWVGERGRIGGQYFHADNWTRVTKPGDDDQRGWSAWASHQITPRYALFTR
HHHHHHHHHHHHHCCCCCCCCEEEECCCCEECCCCCCCCCHHHHHHHCCCCCCCEEEEEE
HDMTRMSLDIDPRMQERYHVIGVEWKPNRHLRLAAVGKRVLQEMANVRIESHEAGLWTQL
CCCEEEEECCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHCCEEECCCCCCEEEE
AF
CC
>Mature Secondary Structure 
GLHAPYGSHAVEGMPRAATETRGESVRLIPWKTLPVVLMLSCAPALAVNVAPATDVSAQ
CCCCCCCCHHHCCCCCCHHHCCCCEEEEEECCHHHHHHHHHCCCHHEEECCCCCCCCEE
IFINASQLDRGDVTSADEDPALDLKRTFITLDHRFNQNWSAQVTTDVQWLRNDDPSDVWL
EEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCEECCCCCHHHHH
RHAYLQRSFGKGRWLRLGNAPTAWIQQESMREGYRYIDAGLIARTKMGAPADYGAHVQYV
HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEE
RGDFTYAASIVTGAGFQRPRLGKRADVEMRLGWTPGKRLELAVGGYRGTRAQDAGHKPRE
ECCCEEEEHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHH
HTARRWNAMASWVGERGRIGGQYFHADNWTRVTKPGDDDQRGWSAWASHQITPRYALFTR
HHHHHHHHHHHHHCCCCCCCCEEEECCCCEECCCCCCCCCHHHHHHHCCCCCCCEEEEEE
HDMTRMSLDIDPRMQERYHVIGVEWKPNRHLRLAAVGKRVLQEMANVRIESHEAGLWTQL
CCCEEEEECCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHCCEEECCCCCCEEEE
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA