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The map label for this gene is tnpA [H]

Identifier: 78047905

GI number: 78047905

Start: 2679449

End: 2679742

Strand: Reverse

Name: tnpA [H]

Synonym: XCV2349

Alternate gene names: 78047905

Gene position: 2679742-2679449 (Counterclockwise)

Preceding gene: 78047906

Following gene: 78047902

Centisome position: 51.75

GC content: 57.82

Gene sequence:

>294_bases
TTGGTTCCACTGCTCCCCAAACCCCAAGCTCATCATGCGCTGAAGCGGGCAATCAGCTTCCACCGCCGCGGTGAAATCCG
CGACCGTTCCGCCGAAGGCCAGCATTACCGCATCGCCGGCATGAATCTGCTCGCCGCCATCATCATCTTCTGGAACACCA
TGAAGCTCGGCGAGGTCGTTGCAAACCAGAAACGCGATGGAAAGCTGCTATCGCCCGATCTCTTGGCCCATGTTTCGCCG
CTCGGATGGGAACACATCAATCTCACCGGAGAATATCGCTGGCCAAAGCCTTAG

Upstream 100 bases:

>100_bases
CATGAAAAGCAGTGCAGAAAAGTCGTTCAGTAAAACAAAGTCTGGATAACCGCCCCTATTTTCGGCAGCGGTGAACTCTA
GCTAAGCCTTACGTTGGTTT

Downstream 100 bases:

>100_bases
CGTAGGATTCCGCCCCCTCCCGCAAACGACCCCTTGGCCGCCGGCACATGGCAGCCCATGCAGTCGGCTTCGTAGCTGAC
GGCGACATTCTTGGCGGGGG

Product: putative transposase (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MVPLLPKPQAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIFWNTMKLGEVVANQKRDGKLLSPDLLAHVSP
LGWEHINLTGEYRWPKP

Sequences:

>Translated_97_residues
MVPLLPKPQAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIFWNTMKLGEVVANQKRDGKLLSPDLLAHVSP
LGWEHINLTGEYRWPKP
>Mature_97_residues
MVPLLPKPQAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIFWNTMKLGEVVANQKRDGKLLSPDLLAHVSP
LGWEHINLTGEYRWPKP

Specific function: Required for transposition of transposon Tn3926 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 11080; Mature: 11080

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPLLPKPQAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIFWNTMKLGEVV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHH
ANQKRDGKLLSPDLLAHVSPLGWEHINLTGEYRWPKP
HCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MVPLLPKPQAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIFWNTMKLGEVV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHH
ANQKRDGKLLSPDLLAHVSPLGWEHINLTGEYRWPKP
HCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2537961 [H]