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The map label for this gene is tnpA [H]

Identifier: 78047877

GI number: 78047877

Start: 2652252

End: 2652650

Strand: Reverse

Name: tnpA [H]

Synonym: XCV2321

Alternate gene names: 78047877

Gene position: 2652650-2652252 (Counterclockwise)

Preceding gene: 78047880

Following gene: 78047875

Centisome position: 51.22

GC content: 63.41

Gene sequence:

>399_bases
ATGCCCCGCCGTTCGATCCTCTCCGCCGCCGAGCGCGAAAGCCTGCTGGCGTTGCCGGACACCAAGGATGAGTTGATCCG
TCACTACACGTTCAGCGAAAGCGACCTCTCCATCATCCGGCAGCGGCGCGGCCCGGCCAATCGGCTGGGCTTCGCGGTGC
AGCTTTGCTACCTACGCTTTCCGGGCGTCATACTGGGCGTTGATGAACCGCCGTTCCCGCCCTTGCTGAAACTGGTCGCC
GACCAGCTCAAGGTCAGCATCGAAAGCTGGGGCAAGTACGGACAGCGGGAGCAGACCCGGCGTGAGCACCTGATCGGGCT
CTGTTGCAAAGATTGGCGGCAGTCAGAGGTAGGCTGTCGCTCTGCGCCGATCAGGCGGCTGCTGCGAAATGGTGGTTGA

Upstream 100 bases:

>100_bases
ACCGCGCTGAATGGTGCAGTCGTCTTCTGAAAATGACAGCCGCGCCGGTTGCCTTGGCGGGCTTGTCACAAACCTACGTT
TTCAAGAAGAAGGAAACCGC

Downstream 100 bases:

>100_bases
GCATGCCCATGGCCTCCGTCAGCGCCGAGGGCCCAATGCCAAAAGCTCTCTCCACAAGGCGCACCTCGCCCCTGATGCCG
GGCTGCAGGCACCAGGGGCG

Product: putative transposase (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MPRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDEPPFPPLLKLVA
DQLKVSIESWGKYGQREQTRREHLIGLCCKDWRQSEVGCRSAPIRRLLRNGG

Sequences:

>Translated_132_residues
MPRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDEPPFPPLLKLVA
DQLKVSIESWGKYGQREQTRREHLIGLCCKDWRQSEVGCRSAPIRRLLRNGG
>Mature_131_residues
PRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDEPPFPPLLKLVAD
QLKVSIESWGKYGQREQTRREHLIGLCCKDWRQSEVGCRSAPIRRLLRNGG

Specific function: Required for transposition of transposon Tn21 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 15086; Mature: 14955

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLGFAVQLCYLRF
CCCHHHHHHHHHHCEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHC
PGVILGVDEPPFPPLLKLVADQLKVSIESWGKYGQREQTRREHLIGLCCKDWRQSEVGCR
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SAPIRRLLRNGG
HHHHHHHHHCCC
>Mature Secondary Structure 
PRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLGFAVQLCYLRF
CCHHHHHHHHHHCEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHC
PGVILGVDEPPFPPLLKLVADQLKVSIESWGKYGQREQTRREHLIGLCCKDWRQSEVGCR
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SAPIRRLLRNGG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029727; 2992807; 6312271 [H]