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The map label for this gene is 78047880

Identifier: 78047880

GI number: 78047880

Start: 2655862

End: 2656419

Strand: Reverse

Name: 78047880

Synonym: XCV2324

Alternate gene names: NA

Gene position: 2656419-2655862 (Counterclockwise)

Preceding gene: 78047881

Following gene: 78047877

Centisome position: 51.3

GC content: 69.18

Gene sequence:

>558_bases
TTGCTGCCGGGTTACGCTTCGCGCAGGATGGCACCTCCGTCCTGCGCGAGCCACCCTTTCCGGAAGCGCGCCATGCCGAC
ACTCGACGCCTTTCTGACCGACGTCCGCGCCTGCACGCGCTGCGCACCGCATCTGCCACACGGCGTGCAGCCGGTCTTCC
AGTTTCACCCGAGTGCGCCCATCCTCATCGCCGGCCAAGCACCGGGGGCCCGGGTCCATGCCTCAGGCGTGCCCTTCGAC
GACGCCAGCGGCGCGCGTCTGCGCGCCTGGCTGGGCGTGGACCGCGACACCTTCTACGACCCTACCCGCATCGCCATTCT
GCCCATGGGCTTCTGTTATCCGGGCACCGGCAAAAGCGGTGACCTGCCGCTACGCCCGGAGTGCGCCCCCCGCCTGGCGC
GAAGCCTTCATGCAGCGTTTCGAGCGCCTGTCGCTGGTCATCGTGCTGGGCAGCTACGCCATGGACTACCACCTCGGTAC
TGGCAAGACGCCGCTCACCCGGGTGGTCGAAGCCTGGCGCGAGCACTGGCCGCAAGCGTTCCCCCTGCCTCACCCTAG

Upstream 100 bases:

>100_bases
CCAAAGCCTTAGCGTAGGATTTCGCCCTCTCCCGCAAACGACCCCGCCAAGACCGACCGCGTATTCATCCAGGGCTATCC
GACACTGACCCAGCACTGAC

Downstream 100 bases:

>100_bases
CCCGCGCAACAATCGCTGGCTGGTGCGCAACCCCTGGTTCCAACAAGACGTGCTGCCCGCGCTGCAAGCACGCGTCCAGG
CAGTCCTCACCGCCAACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLPGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVFQFHPSAPILIAGQAPGARVHASGVPFD
DASGARLRAWLGVDRDTFYDPTRIAILPMGFCYPGTGKSGDLPLRPECAPRLARSLHAAFRAPVAGHRAGQLRHGLPPRY
WQDAAHPGGRSLARALAASVPPASP

Sequences:

>Translated_185_residues
MLPGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVFQFHPSAPILIAGQAPGARVHASGVPFD
DASGARLRAWLGVDRDTFYDPTRIAILPMGFCYPGTGKSGDLPLRPECAPRLARSLHAAFRAPVAGHRAGQLRHGLPPRY
WQDAAHPGGRSLARALAASVPPASP
>Mature_185_residues
MLPGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVFQFHPSAPILIAGQAPGARVHASGVPFD
DASGARLRAWLGVDRDTFYDPTRIAILPMGFCYPGTGKSGDLPLRPECAPRLARSLHAAFRAPVAGHRAGQLRHGLPPRY
WQDAAHPGGRSLARALAASVPPASP

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 19775; Mature: 19775

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVFQFHPSAP
CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
ILIAGQAPGARVHASGVPFDDASGARLRAWLGVDRDTFYDPTRIAILPMGFCYPGTGKSG
EEEECCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC
DLPLRPECAPRLARSLHAAFRAPVAGHRAGQLRHGLPPRYWQDAAHPGGRSLARALAASV
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHCCCCCHHHHHHHHHHCC
PPASP
CCCCC
>Mature Secondary Structure
MLPGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVFQFHPSAP
CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
ILIAGQAPGARVHASGVPFDDASGARLRAWLGVDRDTFYDPTRIAILPMGFCYPGTGKSG
EEEECCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC
DLPLRPECAPRLARSLHAAFRAPVAGHRAGQLRHGLPPRYWQDAAHPGGRSLARALAASV
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHCCCCCHHHHHHHHHHCC
PPASP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]