| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047858
Identifier: 78047858
GI number: 78047858
Start: 2635915
End: 2636238
Strand: Reverse
Name: 78047858
Synonym: XCV2302
Alternate gene names: NA
Gene position: 2636238-2635915 (Counterclockwise)
Preceding gene: 78047859
Following gene: 78047857
Centisome position: 50.91
GC content: 60.19
Gene sequence:
>324_bases ATGAGCCAAAACATCCAGAACCAAGCATTGAAAGTGATCCTGCATGCGCCAACTCCCGCAGCACTGGAGCGCGCACGCAA GAATGCGGTCAATCTCCTGCGCGAAGCGCCTGATGCCGAGCTGCGCATCATTCTCAATGCAGAGGCTGTCAAGGCAGCAC TCGATCAAGCGCATGCCGAGGTGGACATCCACACCTGGGTGTGCCCGACGACGCTGACCCGGATCGGCAGGGAGAACCGG CCGCCGCTCCAGGTGATGGCAGGCCCAGCCGTGATCGAAATCGCGCGCATGCAGCGGACAGGATGGGTCTATATCAGATC ATAG
Upstream 100 bases:
>100_bases CCATCCATCGAGGAGATGCTGCAGAGCGCCTTGAAGTCGGCATCCCAGCAACTCAACCCGTAAACGGACTCCTTCTTTCC GCCATCACGCCCGAACCATC
Downstream 100 bases:
>100_bases CAACAGGCCGCCCAGGCGGCAGAAGGGGCTGGGGACATGGAACTGCGACATCTTCGCTACTTTGTCGTCTTGGCTGACGA GCTGCATTTCACGCACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSQNIQNQALKVILHAPTPAALERARKNAVNLLREAPDAELRIILNAEAVKAALDQAHAEVDIHTWVCPTTLTRIGRENR PPLQVMAGPAVIEIARMQRTGWVYIRS
Sequences:
>Translated_107_residues MSQNIQNQALKVILHAPTPAALERARKNAVNLLREAPDAELRIILNAEAVKAALDQAHAEVDIHTWVCPTTLTRIGRENR PPLQVMAGPAVIEIARMQRTGWVYIRS >Mature_106_residues SQNIQNQALKVILHAPTPAALERARKNAVNLLREAPDAELRIILNAEAVKAALDQAHAEVDIHTWVCPTTLTRIGRENRP PLQVMAGPAVIEIARMQRTGWVYIRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11894; Mature: 11763
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNIQNQALKVILHAPTPAALERARKNAVNLLREAPDAELRIILNAEAVKAALDQAHAE CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCE VDIHTWVCPTTLTRIGRENRPPLQVMAGPAVIEIARMQRTGWVYIRS EEEEEEECHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEC >Mature Secondary Structure SQNIQNQALKVILHAPTPAALERARKNAVNLLREAPDAELRIILNAEAVKAALDQAHAE CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCE VDIHTWVCPTTLTRIGRENRPPLQVMAGPAVIEIARMQRTGWVYIRS EEEEEEECHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA