| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047772
Identifier: 78047772
GI number: 78047772
Start: 2548615
End: 2548995
Strand: Reverse
Name: 78047772
Synonym: XCV2216
Alternate gene names: NA
Gene position: 2548995-2548615 (Counterclockwise)
Preceding gene: 78047784
Following gene: 78047771
Centisome position: 49.22
GC content: 61.42
Gene sequence:
>381_bases ATGTCGGTGTTGCGTGGAGTTCGGGTACTCGTGGTCGAAAACGATGACATGAATGCCATGCTGCTCGACCTGCAGCTTGT TCAGGCGGGTGCCGTCGTCATCGGCCCGGTCGGCGAAGTGCGCGATGCCCTACAGCTGATCAGCGCCGAGCCACCGGATA TCGCAGTGCTGGACTATCGCCTGGGTAACGGCGAAACCAGCGAACCGGTCGCACGCCTGTTGTCGGAGCGCGGTATCCCG TTCGTGCTGGCAACCGGCGTGGCCATCGGCAGCATCCCGAGTGGATTCGAACGTGGTGTCATCCTGATCAAGCCCTATCT GTCCGAAGAACTGATTGGTGCATTGTCCAAAGCGCGCGAGTTGCGCGGCGCTGAGGGCTGA
Upstream 100 bases:
>100_bases AGTGTCAGTTTGCGCCTGACGAATTCAGGTGCAAGCGGGGTCTGCAGCGCTGTGTCCAGGCAGTCCCGATATACTGGCCG ACTCAGTGAAGGAGTAAGCA
Downstream 100 bases:
>100_bases GCCGCAGTACCGGACGCCCTGCCGGTGCCACTGCCAGGTGCGGCACGCCTGCCCTCTCTCTAACACCTTATCCTTCTGTC ACAGGCGCATTGTGTTGCCA
Product: two-component system regulatory protein
Products: NA
Alternate protein names: Two-Component System Regulatory Protein; Two-Component Response Regulator; Response Regulator Receiver; PAS-Family Sensor Histidine Kinase/Receiver Protein; Response Regulator Receiver Domain-Containing Protein; Response Regulator Recevier Domain Protein; Regulatory Protein; Two-Component System Response Regulator Protein; Two Component-Response Regulator Receiver; Response Regulator/Sensor Histidine Kinase; Two-Component System Response Regulator; Two-Component Response Regulator Protein; Signal Transduction Histidine Kinase; Two Component Response Regulator; Bacteriophytochrome Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSVLRGVRVLVVENDDMNAMLLDLQLVQAGAVVIGPVGEVRDALQLISAEPPDIAVLDYRLGNGETSEPVARLLSERGIP FVLATGVAIGSIPSGFERGVILIKPYLSEELIGALSKARELRGAEG
Sequences:
>Translated_126_residues MSVLRGVRVLVVENDDMNAMLLDLQLVQAGAVVIGPVGEVRDALQLISAEPPDIAVLDYRLGNGETSEPVARLLSERGIP FVLATGVAIGSIPSGFERGVILIKPYLSEELIGALSKARELRGAEG >Mature_125_residues SVLRGVRVLVVENDDMNAMLLDLQLVQAGAVVIGPVGEVRDALQLISAEPPDIAVLDYRLGNGETSEPVARLLSERGIPF VLATGVAIGSIPSGFERGVILIKPYLSEELIGALSKARELRGAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13305; Mature: 13173
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLRGVRVLVVENDDMNAMLLDLQLVQAGAVVIGPVGEVRDALQLISAEPPDIAVLDYR CCCCCCEEEEEEECCCCCEEEEHEEHHHCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEE LGNGETSEPVARLLSERGIPFVLATGVAIGSIPSGFERGVILIKPYLSEELIGALSKARE ECCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH LRGAEG HCCCCC >Mature Secondary Structure SVLRGVRVLVVENDDMNAMLLDLQLVQAGAVVIGPVGEVRDALQLISAEPPDIAVLDYR CCCCCEEEEEEECCCCCEEEEHEEHHHCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEE LGNGETSEPVARLLSERGIPFVLATGVAIGSIPSGFERGVILIKPYLSEELIGALSKARE ECCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH LRGAEG HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA