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The map label for this gene is 78047784

Identifier: 78047784

GI number: 78047784

Start: 2555659

End: 2556120

Strand: Reverse

Name: 78047784

Synonym: XCV2228

Alternate gene names: NA

Gene position: 2556120-2555659 (Counterclockwise)

Preceding gene: 78047785

Following gene: 78047772

Centisome position: 49.36

GC content: 68.18

Gene sequence:

>462_bases
ATGCCGAACGCCCTGCACGCTCCGCGTCTAGCCATCGTCCTGGTCGCTGCCCTGATGATGGCGGCCTGTTCCCAATCCCA
GGTTGAGTCCACCGATCACTCCGCTGGCGACCCCGGCCACGCCAGCGGCGAGCACGGCTCCGGCTCGTCGGCAGGTCTGC
CCACCGGCCGCGCCGACGCCGGCGACAAACTCGCCCATGCCAAGGGCAAGGCGACCGGCCAGAGCTGCGTGGACTGCCAC
GGTGCCGATGGCAATGCGCCGATCGATCCCAGCTATCCCAAACTGGGCGGCCAATACGGCGACTATCTTGCGCATGCGCT
GCAGGCCTACCGTAGCGGCGACCGTCAGCATCCGTTGATGACCGCCCAGGCCACGGCGCTGAGCGATCAGGACATCGCCG
ACCTGGCGGCGTACTTCGGCGCGCGTCAGACGCAGTTGCGCGATCTGCACGGCGTCAACTGA

Upstream 100 bases:

>100_bases
AGCGCAAGCATCCAACCATGCAGGCGCAGGCGCAGAGCTTTTCCGAGCAGGACATCGCCGACATCTCCGCCTTTCTGTCC
ACTCTCAAATAAGCGCCCAC

Downstream 100 bases:

>100_bases
GTGCGATGCGAACATCGCACCGTCTCATTCGGGATGAAAAAGCGCTTGCGCGAACATTAACAGGCCGCTATCATTTCGTT
CTCAGTTTCGTGGGGCCATA

Product: putative cytochrome precursor

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPNALHAPRLAIVLVAALMMAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDCH
GADGNAPIDPSYPKLGGQYGDYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYFGARQTQLRDLHGVN

Sequences:

>Translated_153_residues
MPNALHAPRLAIVLVAALMMAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDCH
GADGNAPIDPSYPKLGGQYGDYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYFGARQTQLRDLHGVN
>Mature_152_residues
PNALHAPRLAIVLVAALMMAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDCHG
ADGNAPIDPSYPKLGGQYGDYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYFGARQTQLRDLHGVN

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15671; Mature: 15540

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNALHAPRLAIVLVAALMMAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDKLAHAKGKATGQSCVDCHGADGNAPIDPSYPKLGGQYGDYLAHALQAYRSGDRQHPLM
CCHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
TAQATALSDQDIADLAAYFGARQTQLRDLHGVN
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
PNALHAPRLAIVLVAALMMAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDKLAHAKGKATGQSCVDCHGADGNAPIDPSYPKLGGQYGDYLAHALQAYRSGDRQHPLM
CCHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
TAQATALSDQDIADLAAYFGARQTQLRDLHGVN
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]