| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is cheB [H]
Identifier: 78047571
GI number: 78047571
Start: 2296968
End: 2297351
Strand: Reverse
Name: cheB [H]
Synonym: XCV2015
Alternate gene names: 78047571
Gene position: 2297351-2296968 (Counterclockwise)
Preceding gene: 78047572
Following gene: 78047570
Centisome position: 44.36
GC content: 58.59
Gene sequence:
>384_bases ATGAGCAAACTCACCGTGCTGCTGGTCGACGACCACGAGGGCTTCATCAACGCTGCGATGCGTCATTTTCGCAAGGTCGA TTGGCTCAATATCGTGGGCAGTGCCGCCAATGGGCTGGAAGCGATCGAGCGCTCTGAGTCGCTGCGCCCCAATGTCGTGC TGATGGACCTGGCCATGCCGGAGATGGGCGGGCTGCAGGCCACGCGTCTGATCAAGACGCAGGACGATCCGCCGTATATT GTCATCGCGAGCCACTTCGATGATGCCGAGCATCGTGAACACGCTCTTCGCGCGGGTGCTGACAATTTTGTCAGCAAGCT GTCCTATATCCAGGAAGTCATGCCAATCCTGGAGGGCCTGACGGAAGGAGCCAGGAATGAGTGA
Upstream 100 bases:
>100_bases GCACCGTGGCCAAGTACCGCGAACAACTTGATATCGCACCGGCACGCGAGCGCCGCCGCACCACTAAACCGCTGCTTGCC CGGGCAGGATAAGGACTACT
Downstream 100 bases:
>100_bases GTCCCGCATTCTGTTGATCGACAGTGACGCCGTGCGCGCCGAGCGCACCGTGTCGCTGCTCGAGTTCATGGACTTCAATC CCCGCTGGGTCACCGACGGC
Product: putative two-component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSKLTVLLVDDHEGFINAAMRHFRKVDWLNIVGSAANGLEAIERSESLRPNVVLMDLAMPEMGGLQATRLIKTQDDPPYI VIASHFDDAEHREHALRAGADNFVSKLSYIQEVMPILEGLTEGARNE
Sequences:
>Translated_127_residues MSKLTVLLVDDHEGFINAAMRHFRKVDWLNIVGSAANGLEAIERSESLRPNVVLMDLAMPEMGGLQATRLIKTQDDPPYI VIASHFDDAEHREHALRAGADNFVSKLSYIQEVMPILEGLTEGARNE >Mature_126_residues SKLTVLLVDDHEGFINAAMRHFRKVDWLNIVGSAANGLEAIERSESLRPNVVLMDLAMPEMGGLQATRLIKTQDDPPYIV IASHFDDAEHREHALRAGADNFVSKLSYIQEVMPILEGLTEGARNE
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788222, Length=124, Percent_Identity=33.8709677419355, Blast_Score=66, Evalue=8e-13, Organism=Escherichia coli, GI1788712, Length=120, Percent_Identity=27.5, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 14141; Mature: 14010
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLTVLLVDDHEGFINAAMRHFRKVDWLNIVGSAANGLEAIERSESLRPNVVLMDLAMP CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCC EMGGLQATRLIKTQDDPPYIVIASHFDDAEHREHALRAGADNFVSKLSYIQEVMPILEGL CCCCCCHHHEEECCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TEGARNE HCCCCCC >Mature Secondary Structure SKLTVLLVDDHEGFINAAMRHFRKVDWLNIVGSAANGLEAIERSESLRPNVVLMDLAMP CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCC EMGGLQATRLIKTQDDPPYIVIASHFDDAEHREHALRAGADNFVSKLSYIQEVMPILEGL CCCCCCHHHEEECCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TEGARNE HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA