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The map label for this gene is 78047560

Identifier: 78047560

GI number: 78047560

Start: 2286209

End: 2287483

Strand: Reverse

Name: 78047560

Synonym: XCV2004

Alternate gene names: NA

Gene position: 2287483-2286209 (Counterclockwise)

Preceding gene: 78047561

Following gene: 78047559

Centisome position: 44.17

GC content: 59.84

Gene sequence:

>1275_bases
ATGGCGTTAGCAATCGGTTCGATCGAGCGAGCCACCATCAAGTACCCTGGACTGGATCCGGCGTGTACTAAGCTTGTCGG
TTGGGGAGCCGGACAGTTCTTCCGCGATTTCTATCCGGCCATCGCCGAACGGTTGAACCTGGCGTACACCATCTGTCCGC
GGCAGGAAAATCAGGGCGCGACGGTCCATGGAATCCAGGTCAGGCCGCCCTCTGCGCTGAATGACGAATCCACCGACGAT
GTGCTGATTGTCATCTTCTCTAATCACTACCCGGAGGTGATGAATCAGATCGCAGCGGCGCATGGCCACTTCCGCACGGT
GCGCGCAGTCGATTACGACCAGAGCAGCATCGTGACGCTGCAGGAGCTGCAGAAGCTTGCCGGCCTGTTGCCGGACCTGC
GCATCTCGCGTCGGCTGATCTCGCCGGAGGCGGGAATTTTCGTCCAGGGTCTTGCGTCCGACTTCACACCACTGGTGCTG
GCCTGGAATCGGCTGCATTTTCCTGATGTCTATCAGTGCATGGTGACATGGGACCATCAGTCCGAGGAGCTCCTTGATCG
CTGCCGTCCCTGGCTGGACAAACTGATCCTGGTGCCGCAGCCGGAGAACCTTGGCCTGCATTACCGCAACGCCGTACTCA
GGTCGGCGCGGTTGGGGGCCGAGCACCTGGCCGAGCATGGAATACCGGTCGCCGTGCGCTGCCGCCGCGATAACGTGCTT
ACCGGCTCGGTCCACAAGGTCATCGATACGTACTTTCGCGCCAAACGCAACCAGGGAAAGATTGCTGTGTCGTTGGCGGC
TTCCTGGCAGCACATGCCGTTCCACTTTTCGGAAAAAGCCATGTTGGGCAGGACCGATGACATGGTGGCGTTATGGTCGA
CCCTGGAAGACCCGCGGCCAGCCAGTTATGCGGACGATGAATTGTCGCCGACACTTGAACTCGCACCGGAACGACATTTC
CAGGAGCTCAGCCAGTACACCTTCGAGTCTTCGTTGTGGCGGGACTATGCACGCCGTCTCGGATTCCCTACAGACACCTT
GGCCGACGGCTATCGCTTTGCGCAGTCGCGGCTGCTTGCCCTGGAACCGCATATGAGTTGGAGTTCGCTGAAGTTTGTGC
CTTTGTTCAACGTGGTGCGCGACACCAGCTATTCCTTCTCGATGGACAGCTGGAACCGCCTGTTAACAGATCCCGAGGCG
GCGCTGGAGGCTGCGGAAGCAGTCAGCCGGCTGGCGCTCAATTCGACCGACTTCTGGCAAGGACGAGCGGGCTGA

Upstream 100 bases:

>100_bases
ATGTCGAGAGCAGCTGCACTTTTATACGAAGGTCGTCATACGGAATTGTCATATACCCACAGCGGATACCACATGCAGCC
TTGAATAGGAACCAAGCCAA

Downstream 100 bases:

>100_bases
CCGCTCCGAACGGCCAATATATCGGTTGCCAGGAGGCTTCCATGACTTACGCCATCATCATCCCCGCGCGGCGCGACTCT
TCGCGCCTGCCCGGAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MALAIGSIERATIKYPGLDPACTKLVGWGAGQFFRDFYPAIAERLNLAYTICPRQENQGATVHGIQVRPPSALNDESTDD
VLIVIFSNHYPEVMNQIAAAHGHFRTVRAVDYDQSSIVTLQELQKLAGLLPDLRISRRLISPEAGIFVQGLASDFTPLVL
AWNRLHFPDVYQCMVTWDHQSEELLDRCRPWLDKLILVPQPENLGLHYRNAVLRSARLGAEHLAEHGIPVAVRCRRDNVL
TGSVHKVIDTYFRAKRNQGKIAVSLAASWQHMPFHFSEKAMLGRTDDMVALWSTLEDPRPASYADDELSPTLELAPERHF
QELSQYTFESSLWRDYARRLGFPTDTLADGYRFAQSRLLALEPHMSWSSLKFVPLFNVVRDTSYSFSMDSWNRLLTDPEA
ALEAAEAVSRLALNSTDFWQGRAG

Sequences:

>Translated_424_residues
MALAIGSIERATIKYPGLDPACTKLVGWGAGQFFRDFYPAIAERLNLAYTICPRQENQGATVHGIQVRPPSALNDESTDD
VLIVIFSNHYPEVMNQIAAAHGHFRTVRAVDYDQSSIVTLQELQKLAGLLPDLRISRRLISPEAGIFVQGLASDFTPLVL
AWNRLHFPDVYQCMVTWDHQSEELLDRCRPWLDKLILVPQPENLGLHYRNAVLRSARLGAEHLAEHGIPVAVRCRRDNVL
TGSVHKVIDTYFRAKRNQGKIAVSLAASWQHMPFHFSEKAMLGRTDDMVALWSTLEDPRPASYADDELSPTLELAPERHF
QELSQYTFESSLWRDYARRLGFPTDTLADGYRFAQSRLLALEPHMSWSSLKFVPLFNVVRDTSYSFSMDSWNRLLTDPEA
ALEAAEAVSRLALNSTDFWQGRAG
>Mature_423_residues
ALAIGSIERATIKYPGLDPACTKLVGWGAGQFFRDFYPAIAERLNLAYTICPRQENQGATVHGIQVRPPSALNDESTDDV
LIVIFSNHYPEVMNQIAAAHGHFRTVRAVDYDQSSIVTLQELQKLAGLLPDLRISRRLISPEAGIFVQGLASDFTPLVLA
WNRLHFPDVYQCMVTWDHQSEELLDRCRPWLDKLILVPQPENLGLHYRNAVLRSARLGAEHLAEHGIPVAVRCRRDNVLT
GSVHKVIDTYFRAKRNQGKIAVSLAASWQHMPFHFSEKAMLGRTDDMVALWSTLEDPRPASYADDELSPTLELAPERHFQ
ELSQYTFESSLWRDYARRLGFPTDTLADGYRFAQSRLLALEPHMSWSSLKFVPLFNVVRDTSYSFSMDSWNRLLTDPEAA
LEAAEAVSRLALNSTDFWQGRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47924; Mature: 47793

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAIGSIERATIKYPGLDPACTKLVGWGAGQFFRDFYPAIAERLNLAYTICPRQENQGA
CEEEECCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
TVHGIQVRPPSALNDESTDDVLIVIFSNHYPEVMNQIAAAHGHFRTVRAVDYDQSSIVTL
EEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
QELQKLAGLLPDLRISRRLISPEAGIFVQGLASDFTPLVLAWNRLHFPDVYQCMVTWDHQ
HHHHHHHCCCCCHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHCCCCCCCCEEEEEECCCC
SEELLDRCRPWLDKLILVPQPENLGLHYRNAVLRSARLGAEHLAEHGIPVAVRCRRDNVL
HHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCC
TGSVHKVIDTYFRAKRNQGKIAVSLAASWQHMPFHFSEKAMLGRTDDMVALWSTLEDPRP
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCC
ASYADDELSPTLELAPERHFQELSQYTFESSLWRDYARRLGFPTDTLADGYRFAQSRLLA
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEE
LEPHMSWSSLKFVPLFNVVRDTSYSFSMDSWNRLLTDPEAALEAAEAVSRLALNSTDFWQ
ECCCCCCCCEEHHHHHHHHHCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
GRAG
CCCC
>Mature Secondary Structure 
ALAIGSIERATIKYPGLDPACTKLVGWGAGQFFRDFYPAIAERLNLAYTICPRQENQGA
EEEECCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
TVHGIQVRPPSALNDESTDDVLIVIFSNHYPEVMNQIAAAHGHFRTVRAVDYDQSSIVTL
EEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
QELQKLAGLLPDLRISRRLISPEAGIFVQGLASDFTPLVLAWNRLHFPDVYQCMVTWDHQ
HHHHHHHCCCCCHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHCCCCCCCCEEEEEECCCC
SEELLDRCRPWLDKLILVPQPENLGLHYRNAVLRSARLGAEHLAEHGIPVAVRCRRDNVL
HHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCC
TGSVHKVIDTYFRAKRNQGKIAVSLAASWQHMPFHFSEKAMLGRTDDMVALWSTLEDPRP
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCC
ASYADDELSPTLELAPERHFQELSQYTFESSLWRDYARRLGFPTDTLADGYRFAQSRLLA
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEE
LEPHMSWSSLKFVPLFNVVRDTSYSFSMDSWNRLLTDPEAALEAAEAVSRLALNSTDFWQ
ECCCCCCCCEEHHHHHHHHHCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
GRAG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA