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The map label for this gene is motC [H]

Identifier: 78047518

GI number: 78047518

Start: 2235845

End: 2236585

Strand: Reverse

Name: motC [H]

Synonym: XCV1962

Alternate gene names: 78047518

Gene position: 2236585-2235845 (Counterclockwise)

Preceding gene: 78047530

Following gene: 78047517

Centisome position: 43.19

GC content: 63.56

Gene sequence:

>741_bases
ATGGACAGACTCAGCGTAATCGGACTGGTGCTGGCGATCGTGGCGATCGTGGGCGGCAGCGTGTTGAAAGGTGCCGGCAT
TTCGTCGCTGTGGTCGCCGGCTGCCTTCGTGATCGTCATCGTCGGCACGGTGGCGGCGATCCTGCTGCATACCTCGCCGG
CGGTTTTCCGGCGCGCGTTCAAGATCCTGCGCTGGGTGATCCAGCCGCCGGCCAGCGATCGCCCGCAGTTGGTGGCGCGT
ATCGTCGAGTGGAGCAATATCGCCCGTCGCCAGGGCCTGCTGGGCCTGGAAGACCAGTTGCCGCGTCAGGAGGATGCCTT
TCTGCGCAAAGGCCTGCAGATGCTGGTCGATGGCGTGGAGCCCGAATCCATGCGCCACATGCTGGAGATCGAAGTGGACA
ACCAGGAGCGTCAGGATCTTGCCGCGGCCAAGGTATTCGAGGGCATGGGCATCTATGCGCCCACCCTGGGCATCATCGGC
GCGGTACTGGGCCTGATGGCGGTGATGAAGAACCTGGCCGACCCGGCCATGCTCGGGCATGGCATCGCGGCAGCCTTCAC
CGCCACCATCTACGGCATCGCCTCGGCCAACCTGCTGTTTCTGCCGGTCGCCGCCAAGCTCAAGAGCGTGATCCATTGCA
GCACCAATGAGCGCGAAATGGCGATCGAAGGCCTGATCGCCATCGCCCAGGGCGAGAACCCGCGCAACATCGAATCGAAA
TTGGCAGGCTACTTGCATTAG

Upstream 100 bases:

>100_bases
CGTCGGCAATTCGCAGACCCATTCCCCAGAACGACAACTTTCTGGCGCGCCAACCGGGCGCATCTATCAAGTCCGCCGGG
CCTGGGCCGATACCGCATGC

Downstream 100 bases:

>100_bases
CGCGTTATGGCCCGTCGTCGCAAACACCACGAAGAACATGGCAACCACGAAGCGTGGGCGATTCCGTATGCCGATCTGAT
GACGCTGCTGCTGGCGTTCT

Product: flagellar motor protein

Products: NA

Alternate protein names: Chemotaxis protein MotA [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDRLSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKILRWVIQPPASDRPQLVAR
IVEWSNIARRQGLLGLEDQLPRQEDAFLRKGLQMLVDGVEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIG
AVLGLMAVMKNLADPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMAIEGLIAIAQGENPRNIESK
LAGYLH

Sequences:

>Translated_246_residues
MDRLSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKILRWVIQPPASDRPQLVAR
IVEWSNIARRQGLLGLEDQLPRQEDAFLRKGLQMLVDGVEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIG
AVLGLMAVMKNLADPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMAIEGLIAIAQGENPRNIESK
LAGYLH
>Mature_246_residues
MDRLSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAFKILRWVIQPPASDRPQLVAR
IVEWSNIARRQGLLGLEDQLPRQEDAFLRKGLQMLVDGVEPESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIG
AVLGLMAVMKNLADPAMLGHGIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMAIEGLIAIAQGENPRNIESK
LAGYLH

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 26389; Mature: 26389

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAF
CCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KILRWVIQPPASDRPQLVARIVEWSNIARRQGLLGLEDQLPRQEDAFLRKGLQMLVDGVE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCC
PESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLGLMAVMKNLADPAMLGH
HHHHHHHHEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMAIEGLIAIAQGENPRNIESK
HHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCHHHH
LAGYLH
HHHCCC
>Mature Secondary Structure
MDRLSVIGLVLAIVAIVGGSVLKGAGISSLWSPAAFVIVIVGTVAAILLHTSPAVFRRAF
CCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KILRWVIQPPASDRPQLVARIVEWSNIARRQGLLGLEDQLPRQEDAFLRKGLQMLVDGVE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCC
PESMRHMLEIEVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLGLMAVMKNLADPAMLGH
HHHHHHHHEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GIAAAFTATIYGIASANLLFLPVAAKLKSVIHCSTNEREMAIEGLIAIAQGENPRNIESK
HHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCHHHH
LAGYLH
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]