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The map label for this gene is tsr [H]

Identifier: 78047510

GI number: 78047510

Start: 2224884

End: 2227157

Strand: Reverse

Name: tsr [H]

Synonym: XCV1954

Alternate gene names: 78047510

Gene position: 2227157-2224884 (Counterclockwise)

Preceding gene: 78047511

Following gene: 78047509

Centisome position: 43.01

GC content: 65.74

Gene sequence:

>2274_bases
ATGAAATTCCTGCATTCCATGACCGTCGGGCGACGACTGGCGGTGGCATTCGCGTTGCTGATCGCGTTGCTTGCCGGCTC
CACCGCCCTGGCGCTGTCCCAGTTCAAGACCGTCCAACATCAGGTCGCGATCATCGTCGAGGTCAATAACCGCAAGGCAG
CGCTGCTCAGTCAGATGCGCGAGAGCAACATGCTCGGCGAGCGCTACATCCGCGACTTCATGCTGGCGAGCCCGCAGCAG
CGGCCCGCTGTCGATGCGCAGCTCAAGGCCAATCGCGAACATTACGCACAACTGTGGACCGCGTTGAAACAGCTGCCGAC
CAATAGCGACGGCCTGCGTGCACGGCAGGCCATCGAAGACAGCCTCACCGCTGCCCGCGCCACCAACAACCGGCTGCTGG
GCCTGGTACGCGAAGGCCACCTGGAGGGCGCAAAGCAGCTGCTCAGTGGGCAGGCGCAGCCGTTGCTGGAGCGCCGCTCC
AAGGCGATTGCTGCCGCGGTGGAATTGCAGAATCAGCAGAATGCCGCCGGCGCGGCCACCATCCTGGGCAGCGTGGCGCT
GGCAAACCGTGCCTTGATCGCCTTCGGCCTGCTCGCGGCCGGCCTGGCCGCCGCGTTGGCGTGGCTGATCTCGGCCAGCC
TGGTGCGGCCGCTGAAGCAGGCCACGCAGGTCGCCGATGCGATCGCCCACGGCGATCTGGATCACCCGATCGGCCCGCAG
CCAGGCGATGAGCCCGGCCAGTTGTTGACCAGCATGCGCGGCATGCAGGAGCAGCTCAAGGCCGTTGCCGCCGCGCAGCA
GGAGATGGCCCGCCAGCACGACAGCGGCAAGATCAGCTTCCGCATGGACCAGGATGCGTTTCCCGGGCAATACGGCAGCA
TGGTGCGCGATACCAATGCTCTGGTAGATGCGCATATCGCGGTCAAGCTCAAGCTCGCGCAGATCATGTCGCGCTACGCC
ATCGGCGACCTGAGCCAGGACATGGACCGCCTGCCGGGCGAAGAAGCCGTGTTGAGCGAGACCATGGACACCGTCAAATC
CAACCTGACGGCGATGAACAGCGAGATCAAACTGCTGGCCCAGGCTGCGGCCGATGGCGACTTCAGCGTACGCGGCGATA
CGGCGCGTTTCCAGCACGATTTCCTGGCAATGGTGGAAAGCCTCAACCGGCTGATGGCCACCGCCGACGGTAATTTGGGC
GCGCTGTCGAAGGTGCTGCAGGCCATTGCTGCAGGTGATCTCACCCAGCGCATGCAGGGCGAGTTCAACGGCGTGTTCGC
GCAGATGCGCGACGATGCCAACGCCACCACCGAACAGCTCTCCAGCATTGTCGGGCGCATCCAGCACGCCACGGTGTCGA
TCAATACCGCGGCCAGCGAGATCGCCGCCGGCAACAACGATCTGTCGCAGCGCACCGAGCAGCAGGCCGCCAACCTGGAA
GAAACCGCGGCCTCGATGGAGGAGCTCACCTCCACCGTCAGGCAGAACGCCGAAGGCGCACGCCAGGCCAACCAGCTTGC
GATCGGCGCGGCGGCTGTGGCGTCGCAAGGCGGCGACGTGGTCGGCAAGGTGGTGTCCACCATGGCCGACATCGAAGTCT
CGTCGAAGAAGATCGCCGATATCATCTCCGTCATCGACGGCATTGCCTTCCAGACCAACATCCTGGCGTTGAACGCCGCA
GTGGAAGCGGCACGCGCGGGCGACCAGGGCCGCGGATTCGCGGTGGTGGCCAGCGAAGTGCGCACGCTCGCACAGCGCTC
GGCCGGCGCAGCCAAGGAGATCAAGCACCTCATCGACGACTCGGTGGGCAAGGTCGCCGAAGGCTCCGTCCTGGTGGACC
AGGCCGGCAAGACCATGGCCGACATCGTCGCCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATTTCTGCCGCCTCG
CAGGAACAGTCGGCCGGGATCGAGCAGGTCAACCTCACCGTGACGCAGATGGACGAAACCACCCAGCAGAACGCGGCGCT
GGTGGAAGAAGCCACGGCCGCGGCACGTGCAATGGAAGAACAAGCCGGTCAGTTGTCCGATGCGGTATCGATCTTCAAGG
TGCAGCAGGTCGCCGGTGTGGCGCCCGCGGCCAAGCGCCCTGCACCGCTGCGCCTGGCCGCCGCCACGTCGGCCAGCGCT
GCCAAACGGGTGACCGGCTCTGCTGTCGCAAAACCCAGCGCCGCCCCCGCCACAGCACAACGCCGGCTGGCTGCCGCGGC
CAGCAACAGCGAATCGAACTGGCAGGAGTTCTAA

Upstream 100 bases:

>100_bases
ATGAACGCCAGCATGCTGCAATGAAACATGCGACTTCAGAATTCCGGGTGGCGAACGCTACCGGTGTATCTCTTTTCCAC
CCTCCCCAGAGAGAAACACC

Downstream 100 bases:

>100_bases
GCCCACTGCAGATACACGGCCGCCGGATCAGACGGCAGGTGGTCCCCAGGCCCCGGCAGCAATGTCGGGGCTTTTTTTTG
GCGGGGAAACCCTGCTGAGG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MKFLHSMTVGRRLAVAFALLIALLAGSTALALSQFKTVQHQVAIIVEVNNRKAALLSQMRESNMLGERYIRDFMLASPQQ
RPAVDAQLKANREHYAQLWTALKQLPTNSDGLRARQAIEDSLTAARATNNRLLGLVREGHLEGAKQLLSGQAQPLLERRS
KAIAAAVELQNQQNAAGAATILGSVALANRALIAFGLLAAGLAAALAWLISASLVRPLKQATQVADAIAHGDLDHPIGPQ
PGDEPGQLLTSMRGMQEQLKAVAAAQQEMARQHDSGKISFRMDQDAFPGQYGSMVRDTNALVDAHIAVKLKLAQIMSRYA
IGDLSQDMDRLPGEEAVLSETMDTVKSNLTAMNSEIKLLAQAAADGDFSVRGDTARFQHDFLAMVESLNRLMATADGNLG
ALSKVLQAIAAGDLTQRMQGEFNGVFAQMRDDANATTEQLSSIVGRIQHATVSINTAASEIAAGNNDLSQRTEQQAANLE
ETAASMEELTSTVRQNAEGARQANQLAIGAAAVASQGGDVVGKVVSTMADIEVSSKKIADIISVIDGIAFQTNILALNAA
VEAARAGDQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVGKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAAS
QEQSAGIEQVNLTVTQMDETTQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAGVAPAAKRPAPLRLAAATSASA
AKRVTGSAVAKPSAAPATAQRRLAAAASNSESNWQEF

Sequences:

>Translated_757_residues
MKFLHSMTVGRRLAVAFALLIALLAGSTALALSQFKTVQHQVAIIVEVNNRKAALLSQMRESNMLGERYIRDFMLASPQQ
RPAVDAQLKANREHYAQLWTALKQLPTNSDGLRARQAIEDSLTAARATNNRLLGLVREGHLEGAKQLLSGQAQPLLERRS
KAIAAAVELQNQQNAAGAATILGSVALANRALIAFGLLAAGLAAALAWLISASLVRPLKQATQVADAIAHGDLDHPIGPQ
PGDEPGQLLTSMRGMQEQLKAVAAAQQEMARQHDSGKISFRMDQDAFPGQYGSMVRDTNALVDAHIAVKLKLAQIMSRYA
IGDLSQDMDRLPGEEAVLSETMDTVKSNLTAMNSEIKLLAQAAADGDFSVRGDTARFQHDFLAMVESLNRLMATADGNLG
ALSKVLQAIAAGDLTQRMQGEFNGVFAQMRDDANATTEQLSSIVGRIQHATVSINTAASEIAAGNNDLSQRTEQQAANLE
ETAASMEELTSTVRQNAEGARQANQLAIGAAAVASQGGDVVGKVVSTMADIEVSSKKIADIISVIDGIAFQTNILALNAA
VEAARAGDQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVGKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAAS
QEQSAGIEQVNLTVTQMDETTQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAGVAPAAKRPAPLRLAAATSASA
AKRVTGSAVAKPSAAPATAQRRLAAAASNSESNWQEF
>Mature_757_residues
MKFLHSMTVGRRLAVAFALLIALLAGSTALALSQFKTVQHQVAIIVEVNNRKAALLSQMRESNMLGERYIRDFMLASPQQ
RPAVDAQLKANREHYAQLWTALKQLPTNSDGLRARQAIEDSLTAARATNNRLLGLVREGHLEGAKQLLSGQAQPLLERRS
KAIAAAVELQNQQNAAGAATILGSVALANRALIAFGLLAAGLAAALAWLISASLVRPLKQATQVADAIAHGDLDHPIGPQ
PGDEPGQLLTSMRGMQEQLKAVAAAQQEMARQHDSGKISFRMDQDAFPGQYGSMVRDTNALVDAHIAVKLKLAQIMSRYA
IGDLSQDMDRLPGEEAVLSETMDTVKSNLTAMNSEIKLLAQAAADGDFSVRGDTARFQHDFLAMVESLNRLMATADGNLG
ALSKVLQAIAAGDLTQRMQGEFNGVFAQMRDDANATTEQLSSIVGRIQHATVSINTAASEIAAGNNDLSQRTEQQAANLE
ETAASMEELTSTVRQNAEGARQANQLAIGAAAVASQGGDVVGKVVSTMADIEVSSKKIADIISVIDGIAFQTNILALNAA
VEAARAGDQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVGKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAAS
QEQSAGIEQVNLTVTQMDETTQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAGVAPAAKRPAPLRLAAATSASA
AKRVTGSAVAKPSAAPATAQRRLAAAASNSESNWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=375, Percent_Identity=54.9333333333333, Blast_Score=317, Evalue=2e-87,
Organism=Escherichia coli, GI1788195, Length=362, Percent_Identity=51.9337016574586, Blast_Score=294, Evalue=1e-80,
Organism=Escherichia coli, GI1788194, Length=303, Percent_Identity=55.4455445544555, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1787690, Length=291, Percent_Identity=54.9828178694158, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1789453, Length=240, Percent_Identity=45.8333333333333, Blast_Score=202, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 79630; Mature: 79630

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLHSMTVGRRLAVAFALLIALLAGSTALALSQFKTVQHQVAIIVEVNNRKAALLSQMR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHH
ESNMLGERYIRDFMLASPQQRPAVDAQLKANREHYAQLWTALKQLPTNSDGLRARQAIED
HHCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SLTAARATNNRLLGLVREGHLEGAKQLLSGQAQPLLERRSKAIAAAVELQNQQNAAGAAT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ILGSVALANRALIAFGLLAAGLAAALAWLISASLVRPLKQATQVADAIAHGDLDHPIGPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGDEPGQLLTSMRGMQEQLKAVAAAQQEMARQHDSGKISFRMDQDAFPGQYGSMVRDTNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
LVDAHIAVKLKLAQIMSRYAIGDLSQDMDRLPGEEAVLSETMDTVKSNLTAMNSEIKLLA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAADGDFSVRGDTARFQHDFLAMVESLNRLMATADGNLGALSKVLQAIAAGDLTQRMQG
HHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EFNGVFAQMRDDANATTEQLSSIVGRIQHATVSINTAASEIAAGNNDLSQRTEQQAANLE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH
ETAASMEELTSTVRQNAEGARQANQLAIGAAAVASQGGDVVGKVVSTMADIEVSSKKIAD
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IISVIDGIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDD
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SVGKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDET
HHCCHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEEECHHH
TQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAGVAPAAKRPAPLRLAAATSASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHH
AKRVTGSAVAKPSAAPATAQRRLAAAASNSESNWQEF
HHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKFLHSMTVGRRLAVAFALLIALLAGSTALALSQFKTVQHQVAIIVEVNNRKAALLSQMR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHH
ESNMLGERYIRDFMLASPQQRPAVDAQLKANREHYAQLWTALKQLPTNSDGLRARQAIED
HHCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SLTAARATNNRLLGLVREGHLEGAKQLLSGQAQPLLERRSKAIAAAVELQNQQNAAGAAT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ILGSVALANRALIAFGLLAAGLAAALAWLISASLVRPLKQATQVADAIAHGDLDHPIGPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGDEPGQLLTSMRGMQEQLKAVAAAQQEMARQHDSGKISFRMDQDAFPGQYGSMVRDTNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
LVDAHIAVKLKLAQIMSRYAIGDLSQDMDRLPGEEAVLSETMDTVKSNLTAMNSEIKLLA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAADGDFSVRGDTARFQHDFLAMVESLNRLMATADGNLGALSKVLQAIAAGDLTQRMQG
HHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EFNGVFAQMRDDANATTEQLSSIVGRIQHATVSINTAASEIAAGNNDLSQRTEQQAANLE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH
ETAASMEELTSTVRQNAEGARQANQLAIGAAAVASQGGDVVGKVVSTMADIEVSSKKIAD
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IISVIDGIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDD
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SVGKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDET
HHCCHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEEECHHH
TQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAGVAPAAKRPAPLRLAAATSASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHH
AKRVTGSAVAKPSAAPATAQRRLAAAASNSESNWQEF
HHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]