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The map label for this gene is tsr [H]

Identifier: 78047511

GI number: 78047511

Start: 2227464

End: 2229941

Strand: Reverse

Name: tsr [H]

Synonym: XCV1955

Alternate gene names: 78047511

Gene position: 2229941-2227464 (Counterclockwise)

Preceding gene: 78047512

Following gene: 78047510

Centisome position: 43.06

GC content: 64.73

Gene sequence:

>2478_bases
ATGCACGATGGGTGCTGGAGCGATCGCCGGCAGTATGGGGACTGCCGGCATCAGCAACACCCGTCCGGCCCGACACGACC
GGCGGAGATTCTGGCCCTTTGTCCGGATCTTTCGACGCTGCCATCGTCATTCGCCCAACCACTGACGGGCGCCCACGAGG
CCAGTCGTTCTCTGCAATACGAGAAGACCGCTATGAACTGGTTCCGCAATCTTGCCGTTGCCCGCAAGTTGGCCGTGGCG
TTTTCCTTTACCGCGTTGATCACCTTGAGCCTGGGCGGGTTTGCGCTCGTGCGCATGCAGTCCAGCGCACATCTGTTGCG
CGAGATCGGCACCGTGTGGGCACCGGCCGTGCAGCAACTGAGCGAAATGCGCGCATTGCTCGGCGAATTCCGCACCTACG
AACTTGCCCAGCTGGCACACGCCGACGATCCGAAGGCGGTGCAGAATTATTTCGAACGCATGGACAAGGCGCGCGCCGAC
GTCGCGACGGCGCAGGACGCCTACGCCAAGACCACCACGGCCGGCAGAGAGACCGAGTTGTACGACGAGGTCAAACTGAA
ACTGGACGCGTACTACAAGGCCAACGCCGCACTCAGCGCCGCGGTGCGTGCCGGCGATCTGGTCACTGCCAATCGCGTTT
CCGATGAGCAATCGCGCCCGGCGCGGCGCGACCTGTTCGCGAACTTGGTCGAGCTGACCAAGTTCAACGTCGCCCACATG
GACAGCGAGATCGCGCAGGCCGAGGCGACCTATCAACGCTCGGTGCAGGTCATGCTCGTGGCGATGGTGCTGGTCGTGCT
GCTGGCTGCATTTGCCGGTTGGTTCATCGCCCGCAGCATCGCCGGCCCGCTCGCTCGCGCCACGCGGGTGGCCAGTGCCA
TCGCGCAGGGCAAACTGGATAACGCCATCCACGTCGACAGCCGCGACGAAGCCGGGCAACTGCTGCACAGCATGGAAGGC
ATGCAGCGGCAATTGCAGGCCGTGCTTGCAGCGCAGTCGGAAATGGCCAAGCGCCACGAAGCCGGCCAGATCAGCTACCG
CATGGAACACGATGCGTTTCCAGGCGACTACGGCACCATGGTGCGCGACACCAACAGCCTGGTCGGCTCGCATATCGCGG
TCAAGATGAAACTCGCGCAGATCATGTCGTGCTACGCCATCGGCGACTTCAGCCAGGACATGGACCGCCTACCCGGCGAG
AAGGCCGTGCTCAGTTCTACCATGGATACCGTCAAGGCCAACCTGTCGGCGATGAACGGCGAGATCAAGCTGCTGGCGCA
GGCCGCTGCCAACGGCGACTTCAGCGTGCGCGGCGACACCGCACGTTTTCAGTACGATTTCCAGGCGATGGTGGAGAGCC
TCCACCAGTTGATGGCGACCGCCGATGCCAACCTGAGCGCGCTGTCGAAGCTGTTGCAGTCCATTGCCGCGGGCGATCTC
ACCGAGCGCATGCAAGGCCAGTTCAATGGCGTGTTCGCCCGGATGCGCGACGATGCCAATACCACCACCGCGCAACTTGC
CGATATCGTTGGGCGCATCCAGCACGCCACCTTGTCGATCAATACCGCGGCCAGCGAGATTGCCGCCGGCAACAACGATC
TGTCGCAGCGCACCGAGCAGCAGGCGGCCAACCTTGAAGAAACCGCTGCCTCGATGGAGGAACTCACCTCCACCGTGCGC
CAGAACGCCGAGCATGCGCGCCAGGCCAACCAGCTCGCCATCGGTGCGGCCACGGTGGCCTCGCAAGGCGGCAGCGTAGT
GGCGCAGGTGGTGACCACCATGTCCGGCATCGAAGTGTCCTCGAAGAAGATCGCCGACATCATCAGCGTGATCGACGGCA
TCGCCTTCCAGACCAATATCCTGGCCTTGAATGCCGCCGTGGAAGCAGCGCGTGCCGGCGAGCAGGGCCGTGGTTTTGCC
GTGGTCGCCTCGGAAGTGCGCACGCTGGCGCAGCGTTCGGCCGGCGCGGCCAAGGAGATCAAGCACCTCATCGACGACTC
GGTGAGCAAGGTCGCCGAAGGCTCCGTCCTGGTGGACCAGGCCGGCAAGACCATGGCCGACATCGTCGCCAGCGTGCAGC
GCGTCACCGACATCATGGGCGAGATTTCTGCCGCCTCGCAGGAACAGTCGGCCGGGATCGAGCAGGTCAACCTCACCGTG
ACGCAGATGGACGAAGCCACCCAGCAGAACGCAGCGCTGGTGGAAGAAGCCACGGCCGCGGCGCGTGCGATGGAAGAGCA
GGCCGGTCAGCTGTCCGATGCGGTGTCGATCTTCAAGGTGCAGCAGGTCGCTGCCGTGGCCACTGCAGCCAAGCGCCCTG
CTCCGCCGCGCCTGGCCGCCGCCAAACCAGGCGCTGCCAGATCGGCCACGACCAAGCGCGCCCCTGTATCGGCCGGTGTC
GCGGCCACGGCCACAGCAACGCCACGCCCGGTGATTGCCGCAGCCGCCAACGGCGAGTCGAGTTGGCAGGAGTTCTGA

Upstream 100 bases:

>100_bases
GGACATCGGTGGACTGGTGCGCTCGCTCAAGGTACCGCAAGCCGCGTAATGCACTCGCCGCGGCGTGGATGCCGCGGCGC
AAGGCTCCACCACGCCATCG

Downstream 100 bases:

>100_bases
GCGACGCCTCTGCGTGGAGCAGGCGATAAGGCGACCACGCATGAGCAAGCCCCGGCAGCGATGTCGGGGCTTTTTTTGGC
GCGTGCGGGTTGTAGCAACG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 825; Mature: 825

Protein sequence:

>825_residues
MHDGCWSDRRQYGDCRHQQHPSGPTRPAEILALCPDLSTLPSSFAQPLTGAHEASRSLQYEKTAMNWFRNLAVARKLAVA
FSFTALITLSLGGFALVRMQSSAHLLREIGTVWAPAVQQLSEMRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARAD
VATAQDAYAKTTTAGRETELYDEVKLKLDAYYKANAALSAAVRAGDLVTANRVSDEQSRPARRDLFANLVELTKFNVAHM
DSEIAQAEATYQRSVQVMLVAMVLVVLLAAFAGWFIARSIAGPLARATRVASAIAQGKLDNAIHVDSRDEAGQLLHSMEG
MQRQLQAVLAAQSEMAKRHEAGQISYRMEHDAFPGDYGTMVRDTNSLVGSHIAVKMKLAQIMSCYAIGDFSQDMDRLPGE
KAVLSSTMDTVKANLSAMNGEIKLLAQAAANGDFSVRGDTARFQYDFQAMVESLHQLMATADANLSALSKLLQSIAAGDL
TERMQGQFNGVFARMRDDANTTTAQLADIVGRIQHATLSINTAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVR
QNAEHARQANQLAIGAATVASQGGSVVAQVVTTMSGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFA
VVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTV
TQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAAVATAAKRPAPPRLAAAKPGAARSATTKRAPVSAGV
AATATATPRPVIAAAANGESSWQEF

Sequences:

>Translated_825_residues
MHDGCWSDRRQYGDCRHQQHPSGPTRPAEILALCPDLSTLPSSFAQPLTGAHEASRSLQYEKTAMNWFRNLAVARKLAVA
FSFTALITLSLGGFALVRMQSSAHLLREIGTVWAPAVQQLSEMRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARAD
VATAQDAYAKTTTAGRETELYDEVKLKLDAYYKANAALSAAVRAGDLVTANRVSDEQSRPARRDLFANLVELTKFNVAHM
DSEIAQAEATYQRSVQVMLVAMVLVVLLAAFAGWFIARSIAGPLARATRVASAIAQGKLDNAIHVDSRDEAGQLLHSMEG
MQRQLQAVLAAQSEMAKRHEAGQISYRMEHDAFPGDYGTMVRDTNSLVGSHIAVKMKLAQIMSCYAIGDFSQDMDRLPGE
KAVLSSTMDTVKANLSAMNGEIKLLAQAAANGDFSVRGDTARFQYDFQAMVESLHQLMATADANLSALSKLLQSIAAGDL
TERMQGQFNGVFARMRDDANTTTAQLADIVGRIQHATLSINTAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVR
QNAEHARQANQLAIGAATVASQGGSVVAQVVTTMSGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFA
VVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTV
TQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAAVATAAKRPAPPRLAAAKPGAARSATTKRAPVSAGV
AATATATPRPVIAAAANGESSWQEF
>Mature_825_residues
MHDGCWSDRRQYGDCRHQQHPSGPTRPAEILALCPDLSTLPSSFAQPLTGAHEASRSLQYEKTAMNWFRNLAVARKLAVA
FSFTALITLSLGGFALVRMQSSAHLLREIGTVWAPAVQQLSEMRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARAD
VATAQDAYAKTTTAGRETELYDEVKLKLDAYYKANAALSAAVRAGDLVTANRVSDEQSRPARRDLFANLVELTKFNVAHM
DSEIAQAEATYQRSVQVMLVAMVLVVLLAAFAGWFIARSIAGPLARATRVASAIAQGKLDNAIHVDSRDEAGQLLHSMEG
MQRQLQAVLAAQSEMAKRHEAGQISYRMEHDAFPGDYGTMVRDTNSLVGSHIAVKMKLAQIMSCYAIGDFSQDMDRLPGE
KAVLSSTMDTVKANLSAMNGEIKLLAQAAANGDFSVRGDTARFQYDFQAMVESLHQLMATADANLSALSKLLQSIAAGDL
TERMQGQFNGVFARMRDDANTTTAQLADIVGRIQHATLSINTAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVR
QNAEHARQANQLAIGAATVASQGGSVVAQVVTTMSGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFA
VVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTV
TQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAAVATAAKRPAPPRLAAAKPGAARSATTKRAPVSAGV
AATATATPRPVIAAAANGESSWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=314, Percent_Identity=60.1910828025478, Blast_Score=310, Evalue=2e-85,
Organism=Escherichia coli, GI1788195, Length=324, Percent_Identity=58.0246913580247, Blast_Score=299, Evalue=5e-82,
Organism=Escherichia coli, GI1788194, Length=302, Percent_Identity=55.9602649006622, Blast_Score=291, Evalue=8e-80,
Organism=Escherichia coli, GI1787690, Length=291, Percent_Identity=55.6701030927835, Blast_Score=278, Evalue=1e-75,
Organism=Escherichia coli, GI1789453, Length=320, Percent_Identity=39.375, Blast_Score=206, Evalue=7e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 87895; Mature: 87895

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDGCWSDRRQYGDCRHQQHPSGPTRPAEILALCPDLSTLPSSFAQPLTGAHEASRSLQY
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
EKTAMNWFRNLAVARKLAVAFSFTALITLSLGGFALVRMQSSAHLLREIGTVWAPAVQQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
SEMRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARADVATAQDAYAKTTTAGRETEL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
YDEVKLKLDAYYKANAALSAAVRAGDLVTANRVSDEQSRPARRDLFANLVELTKFNVAHM
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
DSEIAQAEATYQRSVQVMLVAMVLVVLLAAFAGWFIARSIAGPLARATRVASAIAQGKLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAIHVDSRDEAGQLLHSMEGMQRQLQAVLAAQSEMAKRHEAGQISYRMEHDAFPGDYGTM
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH
VRDTNSLVGSHIAVKMKLAQIMSCYAIGDFSQDMDRLPGEKAVLSSTMDTVKANLSAMNG
HHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
EIKLLAQAAANGDFSVRGDTARFQYDFQAMVESLHQLMATADANLSALSKLLQSIAAGDL
HHEEEEHHHCCCCEEECCCCHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHH
TERMQGQFNGVFARMRDDANTTTAQLADIVGRIQHATLSINTAASEIAAGNNDLSQRTEQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHH
QAANLEETAASMEELTSTVRQNAEHARQANQLAIGAATVASQGGSVVAQVVTTMSGIEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH
SKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEI
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
KHLIDDSVSKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTV
HHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEH
TQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAAVATAAKRPAPPRLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AKPGAARSATTKRAPVSAGVAATATATPRPVIAAAANGESSWQEF
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MHDGCWSDRRQYGDCRHQQHPSGPTRPAEILALCPDLSTLPSSFAQPLTGAHEASRSLQY
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
EKTAMNWFRNLAVARKLAVAFSFTALITLSLGGFALVRMQSSAHLLREIGTVWAPAVQQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
SEMRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARADVATAQDAYAKTTTAGRETEL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
YDEVKLKLDAYYKANAALSAAVRAGDLVTANRVSDEQSRPARRDLFANLVELTKFNVAHM
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
DSEIAQAEATYQRSVQVMLVAMVLVVLLAAFAGWFIARSIAGPLARATRVASAIAQGKLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAIHVDSRDEAGQLLHSMEGMQRQLQAVLAAQSEMAKRHEAGQISYRMEHDAFPGDYGTM
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH
VRDTNSLVGSHIAVKMKLAQIMSCYAIGDFSQDMDRLPGEKAVLSSTMDTVKANLSAMNG
HHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
EIKLLAQAAANGDFSVRGDTARFQYDFQAMVESLHQLMATADANLSALSKLLQSIAAGDL
HHEEEEHHHCCCCEEECCCCHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHH
TERMQGQFNGVFARMRDDANTTTAQLADIVGRIQHATLSINTAASEIAAGNNDLSQRTEQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHH
QAANLEETAASMEELTSTVRQNAEHARQANQLAIGAATVASQGGSVVAQVVTTMSGIEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH
SKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEI
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
KHLIDDSVSKVAEGSVLVDQAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTV
HHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEH
TQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAAVATAAKRPAPPRLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AKPGAARSATTKRAPVSAGVAATATATPRPVIAAAANGESSWQEF
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]