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The map label for this gene is tse [H]

Identifier: 78047498

GI number: 78047498

Start: 2204187

End: 2206436

Strand: Reverse

Name: tse [H]

Synonym: XCV1942

Alternate gene names: 78047498

Gene position: 2206436-2204187 (Counterclockwise)

Preceding gene: 78047499

Following gene: 78047497

Centisome position: 42.61

GC content: 65.96

Gene sequence:

>2250_bases
ATGATCGGCTTTCTCCAACGCTATAACGTCGGTACCCGCCTTTCCGCAGCGTTCGGCTTTCTGATCCTGTTGTCCTGCGG
CCTGGTGGTCGCGGGCCTGATGACCTTGGCGCAAGCGCGCGGGCGCATGGATTCGATCGTCAAGCGCAACATGACGATCC
TGGAATATGTCGGCGAGATGCGCAGCGCCAGTGCGGACATTGCAGTCAACCTGCGCAACATCGTGCTGCCGACCACGCAG
GAAGAGAACATCGGCTTCGCAAAAATCGTCGAGCAGCAGCGGCAGTACTACAGCGACATCCACGACAAGCTGTACGCCAT
CCCGCCGTCCGACGCCAATGGTGCGGCAATGCGTCGGCAAATCGATCTTGCCCGCGAAAAGGCGCGTGTCGCCAATCAGC
AGGTGCTGGACCTAGGCATGAACGGCAAGCCCGACCAGGCGCTCAGGGCGCTGATGCAGCAGGCCGCACCGGCAAACCAG
CAATGGCAGGACGCGCTCAATGCATATGCCGCACGCCAGCGCAGCCGTGGCGCGGCGGCCTATGCCGATGCAAACACCGC
GATGGATCGTGGCCGGGCATTGCTGATCGCCGGCGGCCTTGCGGTGATCTTGGTCAGCAGCCTGCTGGCCTGGTGGATCA
CCCGCAGCCTGACCCAGCCGTTGAGCCGTGCCACCCGTGCCGCCGAGGCCATCGCCGAAGGTCGCCTGGACAGCGACGTG
CACACCACCGCCACCGACGAGCCCGGCCGGCTGCTCAGCGCCATGGCCAGGATGCAGACGCAGTTGCAGCGTTTCTCCGG
CGAAACCACGCGGATGATCGCGCTGCACGCCGACAAGGACATGACGCACCGCATGCCGCAGGACTTCCCCGGCGTGTACG
GAGAGCTGAGCAAGGGCATCAACACGATGATGTTCGAGCACCTGGACGCCATCGTCGATGCCATCGAAGTGCTCAACGAA
TACGCCCGCGGCGATCTGCGCCGCGATGCACGGCGCCTGCCGGGCAGCCGCGCGGTGCTGCACGAATCGATGGATGCTGC
CAAGGCCAGCCTGCTGGCGATCAATACCGAGATCAAGCGCCTGGCCAGCGCGGCTGCGGCCGGCGACTTCAGCGCACGCG
GCGATGCGCAGCGGTTCGAGCACGATTTCCTGCGCATGGTGCAGGACCTCAACGCGATGATGGAGGTCAGCGACACCAGC
CTGGTCACCTTGTCGTCGGTGTTGCAGTCGATCGCCGCCGGCGATCTCACCGCCCGCATGCACGGCAACTTCCACGGTGT
ATTCGCCAAGATGCGCGACGACGCCAACGCCACCACCGAGCAGCTCACGCGCATCGTGGTGCGGATCCAGGGCGCGGCCG
GCAACATCAGCGCAGCCACCGGCGAAATCGCCGCCGGCAACCAGGACCTGTCCCAGCGCACCGAACAACAGGCCGCCAAC
CTGGAAGAAACCGCTGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAATGCCGAAAGCGCACGCCAGGCCAACCA
GCTTGCCATCGGCGCCGCCCGCGTTGCAGCGCAAGGCGGGCAGATCGCCAGCAAGGTGGTCGAGACGATGAGCGGAATCG
AGTCTTCGTCCAGGAAGATCGCCGACATCATCAGCGTCATCAATGGCATCTCGTTCCAGACCAACATCCTGGCGCTCAAC
GCCGCGGTGGAGGCGGCGCGCGCCGGCGAACAAGGCCGCGGCTTTGCCGTGGTGGCCAGCGAAGTGCGTACGCTTGCGCA
GCGCTCCACCGCAGCGGCCAAGGAGATCAAGAGCCTGATCGACGATTCGGTGCAGCGCGTGGCCGAAGGCTCGCTGCTGG
TGCACAGCGCCGGCACCACCATGGCCGAAATCGTGACCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATCTCCGCG
GCCTCGCAGGAGCAGTCGTCGGGCATCGAGCAGGTCAACCAGACGGTCACCCAGATGGACGAAACCACCCAGCAGAACGC
CGCGCTGGTGGAAGAAGCCACTGCCGCCGCACGCGCGCTGGAAGAACAGGCGCTCGGATTGACCGAGGCCGTGGCGGTCT
TCAAGACCGACAGCAGTGATGCATCGCAGGCATCGCGTGCAGCCTCACGACGCCCGGCAGCAGCGCCCGCGCTTTCGGCC
AGGGCGGCGGCAGCCGGCCGCGCCCCTGCCGCCACGCTGCGCGCCGTCGTCGCTGCGCCCAGCAACGACAGCAGCTGGCA
GGAGTTCTGA

Upstream 100 bases:

>100_bases
TGCGGCCGACCTAGCTTGCAGCGGGTGCCGACCGTGATCGCGAGGCCGCCGCCGTTGCCTCCAAGCGCCTCCCTCTCCTC
CTTCCCGGCAGGTATGTTTC

Downstream 100 bases:

>100_bases
ACAGATCGCCAGCACTGACTGAACCGGACGGGTCGGCAGCGCTGCCGACCCGTTAAAGGCGTACACGTCGTTAGCCGATA
GCCTGCTTACATCCATGAGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 749; Mature: 749

Protein sequence:

>749_residues
MIGFLQRYNVGTRLSAAFGFLILLSCGLVVAGLMTLAQARGRMDSIVKRNMTILEYVGEMRSASADIAVNLRNIVLPTTQ
EENIGFAKIVEQQRQYYSDIHDKLYAIPPSDANGAAMRRQIDLAREKARVANQQVLDLGMNGKPDQALRALMQQAAPANQ
QWQDALNAYAARQRSRGAAAYADANTAMDRGRALLIAGGLAVILVSSLLAWWITRSLTQPLSRATRAAEAIAEGRLDSDV
HTTATDEPGRLLSAMARMQTQLQRFSGETTRMIALHADKDMTHRMPQDFPGVYGELSKGINTMMFEHLDAIVDAIEVLNE
YARGDLRRDARRLPGSRAVLHESMDAAKASLLAINTEIKRLASAAAAGDFSARGDAQRFEHDFLRMVQDLNAMMEVSDTS
LVTLSSVLQSIAAGDLTARMHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNISAATGEIAAGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAESARQANQLAIGAARVAAQGGQIASKVVETMSGIESSSRKIADIISVINGISFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLIDDSVQRVAEGSLLVHSAGTTMAEIVTSVQRVTDIMGEISA
ASQEQSSGIEQVNQTVTQMDETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSSDASQASRAASRRPAAAPALSA
RAAAAGRAPAATLRAVVAAPSNDSSWQEF

Sequences:

>Translated_749_residues
MIGFLQRYNVGTRLSAAFGFLILLSCGLVVAGLMTLAQARGRMDSIVKRNMTILEYVGEMRSASADIAVNLRNIVLPTTQ
EENIGFAKIVEQQRQYYSDIHDKLYAIPPSDANGAAMRRQIDLAREKARVANQQVLDLGMNGKPDQALRALMQQAAPANQ
QWQDALNAYAARQRSRGAAAYADANTAMDRGRALLIAGGLAVILVSSLLAWWITRSLTQPLSRATRAAEAIAEGRLDSDV
HTTATDEPGRLLSAMARMQTQLQRFSGETTRMIALHADKDMTHRMPQDFPGVYGELSKGINTMMFEHLDAIVDAIEVLNE
YARGDLRRDARRLPGSRAVLHESMDAAKASLLAINTEIKRLASAAAAGDFSARGDAQRFEHDFLRMVQDLNAMMEVSDTS
LVTLSSVLQSIAAGDLTARMHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNISAATGEIAAGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAESARQANQLAIGAARVAAQGGQIASKVVETMSGIESSSRKIADIISVINGISFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLIDDSVQRVAEGSLLVHSAGTTMAEIVTSVQRVTDIMGEISA
ASQEQSSGIEQVNQTVTQMDETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSSDASQASRAASRRPAAAPALSA
RAAAAGRAPAATLRAVVAAPSNDSSWQEF
>Mature_749_residues
MIGFLQRYNVGTRLSAAFGFLILLSCGLVVAGLMTLAQARGRMDSIVKRNMTILEYVGEMRSASADIAVNLRNIVLPTTQ
EENIGFAKIVEQQRQYYSDIHDKLYAIPPSDANGAAMRRQIDLAREKARVANQQVLDLGMNGKPDQALRALMQQAAPANQ
QWQDALNAYAARQRSRGAAAYADANTAMDRGRALLIAGGLAVILVSSLLAWWITRSLTQPLSRATRAAEAIAEGRLDSDV
HTTATDEPGRLLSAMARMQTQLQRFSGETTRMIALHADKDMTHRMPQDFPGVYGELSKGINTMMFEHLDAIVDAIEVLNE
YARGDLRRDARRLPGSRAVLHESMDAAKASLLAINTEIKRLASAAAAGDFSARGDAQRFEHDFLRMVQDLNAMMEVSDTS
LVTLSSVLQSIAAGDLTARMHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNISAATGEIAAGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAESARQANQLAIGAARVAAQGGQIASKVVETMSGIESSSRKIADIISVINGISFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLIDDSVQRVAEGSLLVHSAGTTMAEIVTSVQRVTDIMGEISA
ASQEQSSGIEQVNQTVTQMDETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSSDASQASRAASRRPAAAPALSA
RAAAAGRAPAATLRAVVAAPSNDSSWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=324, Percent_Identity=57.0987654320988, Blast_Score=295, Evalue=5e-81,
Organism=Escherichia coli, GI2367378, Length=307, Percent_Identity=59.9348534201954, Blast_Score=294, Evalue=2e-80,
Organism=Escherichia coli, GI1788194, Length=325, Percent_Identity=54.4615384615385, Blast_Score=281, Evalue=1e-76,
Organism=Escherichia coli, GI1787690, Length=301, Percent_Identity=55.4817275747508, Blast_Score=279, Evalue=6e-76,
Organism=Escherichia coli, GI1789453, Length=232, Percent_Identity=46.1206896551724, Blast_Score=199, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 79922; Mature: 79922

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFLQRYNVGTRLSAAFGFLILLSCGLVVAGLMTLAQARGRMDSIVKRNMTILEYVGEM
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RSASADIAVNLRNIVLPTTQEENIGFAKIVEQQRQYYSDIHDKLYAIPPSDANGAAMRRQ
HCCCCCCEEEHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH
IDLAREKARVANQQVLDLGMNGKPDQALRALMQQAAPANQQWQDALNAYAARQRSRGAAA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCH
YADANTAMDRGRALLIAGGLAVILVSSLLAWWITRSLTQPLSRATRAAEAIAEGRLDSDV
HCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HTTATDEPGRLLSAMARMQTQLQRFSGETTRMIALHADKDMTHRMPQDFPGVYGELSKGI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCCCCHHHHHHHHH
NTMMFEHLDAIVDAIEVLNEYARGDLRRDARRLPGSRAVLHESMDAAKASLLAINTEIKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LASAAAAGDFSARGDAQRFEHDFLRMVQDLNAMMEVSDTSLVTLSSVLQSIAAGDLTARM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH
HGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNISAATGEIAAGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAESARQANQLAIGAARVAAQGGQIASKVVETMSGIESSSRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ADIISVINGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLI
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DDSVQRVAEGSLLVHSAGTTMAEIVTSVQRVTDIMGEISAASQEQSSGIEQVNQTVTQMD
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSSDASQASRAASRRPAAAPALSA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHH
RAAAAGRAPAATLRAVVAAPSNDSSWQEF
HHHHCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIGFLQRYNVGTRLSAAFGFLILLSCGLVVAGLMTLAQARGRMDSIVKRNMTILEYVGEM
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RSASADIAVNLRNIVLPTTQEENIGFAKIVEQQRQYYSDIHDKLYAIPPSDANGAAMRRQ
HCCCCCCEEEHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH
IDLAREKARVANQQVLDLGMNGKPDQALRALMQQAAPANQQWQDALNAYAARQRSRGAAA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCH
YADANTAMDRGRALLIAGGLAVILVSSLLAWWITRSLTQPLSRATRAAEAIAEGRLDSDV
HCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HTTATDEPGRLLSAMARMQTQLQRFSGETTRMIALHADKDMTHRMPQDFPGVYGELSKGI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCCCCHHHHHHHHH
NTMMFEHLDAIVDAIEVLNEYARGDLRRDARRLPGSRAVLHESMDAAKASLLAINTEIKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LASAAAAGDFSARGDAQRFEHDFLRMVQDLNAMMEVSDTSLVTLSSVLQSIAAGDLTARM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH
HGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNISAATGEIAAGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAESARQANQLAIGAARVAAQGGQIASKVVETMSGIESSSRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ADIISVINGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLI
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DDSVQRVAEGSLLVHSAGTTMAEIVTSVQRVTDIMGEISAASQEQSSGIEQVNQTVTQMD
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSSDASQASRAASRRPAAAPALSA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHH
RAAAAGRAPAATLRAVVAAPSNDSSWQEF
HHHHCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]