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The map label for this gene is tcp [H]

Identifier: 78047497

GI number: 78047497

Start: 2201605

End: 2204079

Strand: Reverse

Name: tcp [H]

Synonym: XCV1941

Alternate gene names: 78047497

Gene position: 2204079-2201605 (Counterclockwise)

Preceding gene: 78047498

Following gene: 78047496

Centisome position: 42.56

GC content: 65.41

Gene sequence:

>2475_bases
ATGACCACCTCACCCACGCTGTCGCCGCAGACCATTCCCGCTTTGCCACGCCGCTGGACCAGCCGTTGGGACGACCTGGC
CATCGCCAGGAAACTCGGCATCATCGGCGTGCTTGCGTTGGTGGGGCTGGTCATTCCGGTGCTGCTCTATAGCGGCAAGC
TCAATGAAAGCGTCGCCATCAGTAGCAACGAATTGCGCAGCTACGCGCCGCTTGGCCAAATGCTGGGCCTGATCACCGAC
CTGCACGCAGCCCATGTGGATAGCGGCAGCGCCGCCAAAGACGCCGCGCAGCGCGCCGAGCGCGATCTCGCCCAGCTGCT
CGCCACCACGGCCGGCATGCCCGGCTTCGAACGCAGCCAGAAGCAATTGCTGGCCTTGCAGCAGCGCCATGTTGCCGGTG
CCGCCGCAGAAGGCTACGCCGCCGTGAGCGAGCAGGCCTTCGCCGCGCTCGATGCATTGCGCGACGACAGCCAGCTGGTC
TACACCCCGTACATCGAGAGCTACCACCTGGTGGTGTCCACGCTGATCTACAGCCCCGAGACCACCGAATCGCTGACCCG
TCTGGACGCCGCCAGCGACCCCTCGCAGGCGGGCGACAGCCGCGCCATGCTGCGCGAGCAGCTCGATCAACTTGACCGAA
ACCATGTGCGTTTCCGCCATGAACTGGACAAGGCGATGGGCTTGTTGGAACAGCCCGACCCTGCGCTGGCCGATGCCGCC
AAGGCCGAAGCGACCCAGGCAAGCGCCGCACTGGCTGCACTGGGGTCCGCCCTGGACGGCAGCGATGCCAAGGCAGACGC
ACAGTGGAATGCCGCACTCGATGCGCTGGGCCAGACCATGCGGGACCTCAGCAACGTGTCCCTGCAAGCGCTGCAGCGGC
AATCCGAACGTCACCTGGTCGACGCACGCAACGCGATGTGGCAAGCGATCGCCGGCCTATCGGTGCTGGCGCTGCTGATC
GCCGCGCTGTGCTGGTACACCTTGTCGCGCCTGACCCGCAATGTGCGCCGCGCCGCGACGGTGGCCGCCAATATCGCGCA
GGGTCGGCTGGACGATCAGGTCAGTGCCGCCGGCCGCGACGAAACCGGTCAATTGCTCGACACCATGCGCCAGATGCAAG
GGCAACTGCAGCGCGTGCTCAGCGCGCAAAGCGAAATGGCGCAGCGCCACGATGCCGGCCAGATCAGCTACCGCATGCAG
GCAGACAGTTTCCCCGGTGCCTACGCCACCATGGTGCACGACACCAACGCGCTGGTGGGCTCGCACATTGCGGTCAAGAT
GAAGCTTGCGCAGATCATGTCGCGCTATGCCATCGGCGACCTGAGCCAGGACATGGAGCGCCTGCCTGGCGAAAAGGCCG
TGCTCACCGACACCATGGATACCGTCAAGGCCAACCTGTCGGCGATGAACAGCCAGATCAAGCTGCTTGCGCAGGCCGCA
GCCAATGGCGATTTCAGCGTACGCGGCGACGCACAGCGCTTCCAGTACGATTTCCGCGCGATGGTGGACAGCCTCAATCA
CTTGATGGCCACCGCCGATGCGAATCTGCACGCGCTCTCGACGGTGTTGCAGGCGATTGCGGCGGGCGACCTCACCGCCC
GCATGCACGGCGATTTCCATGGCGTGTTCGCGCGCATGCGCGACGACGCCAATACCACCGTGACCCAGCTGGCCAATATC
GTCGGGCGCATCCAGCAGTCCACCAATGCCATCAACGATGCCGCCAGCGAAATTGCCACCGGCAATCAGGACCTGTCGCA
GCGCACCGAACAGCAAGCGGCCAATCTGGAGGAAACCGCTGCCTCGATGGAAGAACTCACCTCCACCGTGCGCAACAACG
CCGAGCATGCGCGCCGCGCGAACCAGCTGGTGGTCGGTGCGGCCACGGTCGCCTCGCAAGGCGGTGCGGTGGTGGGTGAG
GTGGTGGGCACCATGGCCGGCATCCAGACTGCATCCAAGAAGATCGCCGACATCATCAGCGTCATCGACGGCATCGCCTT
CCAGACCAATATCCTGGCCTTGAACGCGGCGGTGGAAGCGGCACGCGCGGGCGAACAAGGCCGTGGCTTTGCGGTGGTGG
CCAGTGAAGTGCGCACGCTGGCGCAACGCTCGGCCGGTGCGGCAAAAGAGATCAAGCACCTGATCGAGGACTCGGTCAGC
CGCGTCGAACACGGCAGCCAGCTGGTGGGCCAGGCCGGTCGCACCATGCAGGACATCGTCGATTCGGTGCAGAACGTCAC
CACCATCATGCATGAGATCAGCGAGGCCTCGCAGCAGCAGTCGCAAGGCATCGAACAGGTTGGCCAGACCGTCGCGCAGA
TGGACCAGGCCACCCAGCAGAACGCCGCGCTGGTGGAAGAAGCCACCGCCGCCGCCCGGTCGATGGAAGAACAGGCGCAG
CAATTGCGCGATGCGGTCTCGGTGTTCCAGTTGCAGGCCGGGTCTGCGCATCGCCGCCTGGGCCACGCTGCCTGA

Upstream 100 bases:

>100_bases
GCCAGCACTGACTGAACCGGACGGGTCGGCAGCGCTGCCGACCCGTTAAAGGCGTACACGTCGTTAGCCGATAGCCTGCT
TACATCCATGAGACGCATCA

Downstream 100 bases:

>100_bases
GGCAACGCCTGGCGATCGACCGGCCCCTGGGACGCTGCGCGCACGCCTGCGTCCCACCTTGGTCACTGCCCGCTGCCTGC
ATCGGTCAGGCACCGGCGCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 824; Mature: 823

Protein sequence:

>824_residues
MTTSPTLSPQTIPALPRRWTSRWDDLAIARKLGIIGVLALVGLVIPVLLYSGKLNESVAISSNELRSYAPLGQMLGLITD
LHAAHVDSGSAAKDAAQRAERDLAQLLATTAGMPGFERSQKQLLALQQRHVAGAAAEGYAAVSEQAFAALDALRDDSQLV
YTPYIESYHLVVSTLIYSPETTESLTRLDAASDPSQAGDSRAMLREQLDQLDRNHVRFRHELDKAMGLLEQPDPALADAA
KAEATQASAALAALGSALDGSDAKADAQWNAALDALGQTMRDLSNVSLQALQRQSERHLVDARNAMWQAIAGLSVLALLI
AALCWYTLSRLTRNVRRAATVAANIAQGRLDDQVSAAGRDETGQLLDTMRQMQGQLQRVLSAQSEMAQRHDAGQISYRMQ
ADSFPGAYATMVHDTNALVGSHIAVKMKLAQIMSRYAIGDLSQDMERLPGEKAVLTDTMDTVKANLSAMNSQIKLLAQAA
ANGDFSVRGDAQRFQYDFRAMVDSLNHLMATADANLHALSTVLQAIAAGDLTARMHGDFHGVFARMRDDANTTVTQLANI
VGRIQQSTNAINDAASEIATGNQDLSQRTEQQAANLEETAASMEELTSTVRNNAEHARRANQLVVGAATVASQGGAVVGE
VVGTMAGIQTASKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVS
RVEHGSQLVGQAGRTMQDIVDSVQNVTTIMHEISEASQQQSQGIEQVGQTVAQMDQATQQNAALVEEATAAARSMEEQAQ
QLRDAVSVFQLQAGSAHRRLGHAA

Sequences:

>Translated_824_residues
MTTSPTLSPQTIPALPRRWTSRWDDLAIARKLGIIGVLALVGLVIPVLLYSGKLNESVAISSNELRSYAPLGQMLGLITD
LHAAHVDSGSAAKDAAQRAERDLAQLLATTAGMPGFERSQKQLLALQQRHVAGAAAEGYAAVSEQAFAALDALRDDSQLV
YTPYIESYHLVVSTLIYSPETTESLTRLDAASDPSQAGDSRAMLREQLDQLDRNHVRFRHELDKAMGLLEQPDPALADAA
KAEATQASAALAALGSALDGSDAKADAQWNAALDALGQTMRDLSNVSLQALQRQSERHLVDARNAMWQAIAGLSVLALLI
AALCWYTLSRLTRNVRRAATVAANIAQGRLDDQVSAAGRDETGQLLDTMRQMQGQLQRVLSAQSEMAQRHDAGQISYRMQ
ADSFPGAYATMVHDTNALVGSHIAVKMKLAQIMSRYAIGDLSQDMERLPGEKAVLTDTMDTVKANLSAMNSQIKLLAQAA
ANGDFSVRGDAQRFQYDFRAMVDSLNHLMATADANLHALSTVLQAIAAGDLTARMHGDFHGVFARMRDDANTTVTQLANI
VGRIQQSTNAINDAASEIATGNQDLSQRTEQQAANLEETAASMEELTSTVRNNAEHARRANQLVVGAATVASQGGAVVGE
VVGTMAGIQTASKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVS
RVEHGSQLVGQAGRTMQDIVDSVQNVTTIMHEISEASQQQSQGIEQVGQTVAQMDQATQQNAALVEEATAAARSMEEQAQ
QLRDAVSVFQLQAGSAHRRLGHAA
>Mature_823_residues
TTSPTLSPQTIPALPRRWTSRWDDLAIARKLGIIGVLALVGLVIPVLLYSGKLNESVAISSNELRSYAPLGQMLGLITDL
HAAHVDSGSAAKDAAQRAERDLAQLLATTAGMPGFERSQKQLLALQQRHVAGAAAEGYAAVSEQAFAALDALRDDSQLVY
TPYIESYHLVVSTLIYSPETTESLTRLDAASDPSQAGDSRAMLREQLDQLDRNHVRFRHELDKAMGLLEQPDPALADAAK
AEATQASAALAALGSALDGSDAKADAQWNAALDALGQTMRDLSNVSLQALQRQSERHLVDARNAMWQAIAGLSVLALLIA
ALCWYTLSRLTRNVRRAATVAANIAQGRLDDQVSAAGRDETGQLLDTMRQMQGQLQRVLSAQSEMAQRHDAGQISYRMQA
DSFPGAYATMVHDTNALVGSHIAVKMKLAQIMSRYAIGDLSQDMERLPGEKAVLTDTMDTVKANLSAMNSQIKLLAQAAA
NGDFSVRGDAQRFQYDFRAMVDSLNHLMATADANLHALSTVLQAIAAGDLTARMHGDFHGVFARMRDDANTTVTQLANIV
GRIQQSTNAINDAASEIATGNQDLSQRTEQQAANLEETAASMEELTSTVRNNAEHARRANQLVVGAATVASQGGAVVGEV
VGTMAGIQTASKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVSR
VEHGSQLVGQAGRTMQDIVDSVQNVTTIMHEISEASQQQSQGIEQVGQTVAQMDQATQQNAALVEEATAAARSMEEQAQQ
LRDAVSVFQLQAGSAHRRLGHAA

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=299, Percent_Identity=60.2006688963211, Blast_Score=289, Evalue=4e-79,
Organism=Escherichia coli, GI1787690, Length=293, Percent_Identity=55.6313993174061, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1788195, Length=257, Percent_Identity=64.2023346303502, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1788194, Length=295, Percent_Identity=56.271186440678, Blast_Score=276, Evalue=6e-75,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=42.2310756972112, Blast_Score=197, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 87936; Mature: 87805

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPTLSPQTIPALPRRWTSRWDDLAIARKLGIIGVLALVGLVIPVLLYSGKLNESVAI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC
SSNELRSYAPLGQMLGLITDLHAAHVDSGSAAKDAAQRAERDLAQLLATTAGMPGFERSQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KQLLALQQRHVAGAAAEGYAAVSEQAFAALDALRDDSQLVYTPYIESYHLVVSTLIYSPE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCC
TTESLTRLDAASDPSQAGDSRAMLREQLDQLDRNHVRFRHELDKAMGLLEQPDPALADAA
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KAEATQASAALAALGSALDGSDAKADAQWNAALDALGQTMRDLSNVSLQALQRQSERHLV
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARNAMWQAIAGLSVLALLIAALCWYTLSRLTRNVRRAATVAANIAQGRLDDQVSAAGRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
ETGQLLDTMRQMQGQLQRVLSAQSEMAQRHDAGQISYRMQADSFPGAYATMVHDTNALVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHEECCHHHHH
SHIAVKMKLAQIMSRYAIGDLSQDMERLPGEKAVLTDTMDTVKANLSAMNSQIKLLAQAA
HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
ANGDFSVRGDAQRFQYDFRAMVDSLNHLMATADANLHALSTVLQAIAAGDLTARMHGDFH
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCHHH
GVFARMRDDANTTVTQLANIVGRIQQSTNAINDAASEIATGNQDLSQRTEQQAANLEETA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ASMEELTSTVRNNAEHARRANQLVVGAATVASQGGAVVGEVVGTMAGIQTASKKIADIIS
HHHHHHHHHHHCCHHHHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RVEHGSQLVGQAGRTMQDIVDSVQNVTTIMHEISEASQQQSQGIEQVGQTVAQMDQATQQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAALVEEATAAARSMEEQAQQLRDAVSVFQLQAGSAHRRLGHAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
TTSPTLSPQTIPALPRRWTSRWDDLAIARKLGIIGVLALVGLVIPVLLYSGKLNESVAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]