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The map label for this gene is tcp [H]

Identifier: 78047496

GI number: 78047496

Start: 2198757

End: 2201018

Strand: Reverse

Name: tcp [H]

Synonym: XCV1940

Alternate gene names: 78047496

Gene position: 2201018-2198757 (Counterclockwise)

Preceding gene: 78047497

Following gene: 78047495

Centisome position: 42.5

GC content: 64.1

Gene sequence:

>2262_bases
ATGATTGCTCTTCTTCAACGCTACAACGTCGGCAAGCGCCTGGGCTTCGCCTTCGGCACGCTGATCCTGCTGTCCTGCGC
CCTGGTCGTCGCTGGCCTGTATACGCTGGCGCAGGCGCGCCAAAGCCTGGATACGCTCGCTAATCGCAACATGGTGATCG
TCCAGCGGCTGCAGGAAATGAACAACGCGGTGTCGGTCATTGCCGTGCAGCTGCGCAACATCGTATTGCCGACGCCAGAC
GAAGAAAATCAACACTTCGTGGCGATCATCCAAGAGCAGCGCCGCATCTACAAGGAAGCACACGACAAGCTCTACACCTT
CTCGGCAACGCCTGTAGCTCAGGCGCTACGTGAGAGGATCGATGCCAACAACCAGGCCGCCCGCGCGCTCAACCAGCAGG
TGATCGACCTGGACCTGGCCGGCAAAACCGACGAAGCGATGCCCTTGCTGTTGCAGCGTGCCGCACCGGCCACGCAGGCA
TGGCAGGACGCGCTGCTGGAGTATTCGGCGTTGCAGCGCCAACGTGCCCAGGAAGCCAATGCGCTGGCCACCACGGCGAT
GGCCCGCGGGCGAGCCATGTTGATTGGTGGCGGCCTGGCGGTGGTGCTGATCAGCGGCTTGCTGGCATGGCTGATCACCC
GCAGCCTGGTGGTTCCGCTGACGCGCGCCACGCGCGCGGCCGAAGCCATTGCCCAAGGCAACCTGGACAACGACGTCAGC
GCGAACTCCAACGACGAGACCGGTCGCCTGTTGCATGCCATGGACAACATGCAGGGCCAGCTGCGCAATCTGATTGCCGC
ACAGCTGGGCATGGCCAAGCGCCATGAAGAAGGCCAGATCAGCTTCCGCATGGATGCCGGCGCGTTCCCTGGCGATTTCG
GCCGCATGGCCAATGACACCAACGAATTGGTGGCCGCGCACATCAAGGTGAAGATGCAGACCATCCATCTGATCGAGCGT
TATGCCATCGGCGACCTGTCCGAAGACATGCAGCAGTTGCCCGGCGAGAAGGCGGCCATCACCGCGGCAATGAACCAGGT
CAAGCACAACCTGTCGACCATGAACACCGAAATCAAGCAGCTGGCGCAGGCTGCGGCCAGTGGCGACTTCACCGCGCGTG
GCAATGCCGAGCAGTTCCAGTTCGATTTCCGCATCATGGTGGAAAGCCTCAACACCTTGATGGCCACCGCCGACGGCAAC
CTGCAATCGCTCTCTGGCTTGTTGCAGTCGATCGCTGCCGGCGACCTCACCGCGCGCATGAGTGGCCAATACCAGGGCGT
GTTCGCGCAGATGCGCGACGACGCCAATGCCACCGCCGAACAACTGGCCAGCATCGTCGGCCGCATCCAGATCGCAGCCG
ACGCGATCGGCCTGGCCTCGGGCGAAATCGCTTCCGGTAACCAGGATCTGTCGCAGCGTACCGAACAGCAGGCCGCCAAC
CTGGAAGAAACCGCCGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAACGCCGAGCACGCCAGCCAGGCCAACCA
GCTCGCCATCGGCGCCGCTGCGGTGGCCTCGCAAGGCGGCGATGTGGTGGCCAAGGTGGTCACCACCATGTCCGACATCC
AGGGCTCGTCCAGGAAGATCGCCGAGATCATCAGCGTCATCGACGGCATCGCATTCCAGACCAATATCCTGGCCTTGAAT
GCGGCGGTGGAAGCGGCGCGCGCCGGCGAACAGGGTCGCGGCTTCGCCGTGGTCGCCTCCGAGGTGCGCACGCTGGCGCA
GCGTTCGGCCGGTGCTGCCAAGGAGATCAAGCACCTGATCGACGACTCGGTGGAAAAGGTCACGCAAGGCGCAACCCTGG
TCGATCAGGCCGGCACCACCATGGCCGAGATCGTCGCCAGCGTGCAGCGCGTCACCAACATCATGGGCGAGATCTCCTCG
GCTTCGCAGGAACAGTATGCGGGTATCGAGCAGGTCAACCAGACCGTCACCCAGATGGACGAAACCACCCAGCAGAACGC
CGCGTTGGTGGAGGAAGCCACCGCCGCCGCACGCGCAATGGAAGAACAGGCGCAGCAGCTGACCGAAGCAGTGGCGGTCT
TCAAGGTGGCTGCGCATGCACCGGTGGCGCGTCGGTTGTCGGCCATTGCCAGCGCACCGGCCAATGCCCGCTCCGCACCG
CGCCCGGCAGCACGCGTCACCCCGGTGGCCGCATCGCCGCGTCGCAGCACGACGGCCAACGCCGCATCGGCCGCTGATGT
AGCCGATTGGCAGGAGTTCTGA

Upstream 100 bases:

>100_bases
CGGTTCGACGCATGCCCGCATCGGCGCCACCAGCGTACCCAGTACGCCTCCCCGCCCTGCGCACTGCCCCTTTCCTGCCC
ATCGCCCTCGAGATCCCAAC

Downstream 100 bases:

>100_bases
TCGCGAAGACGTTTTGATCGCGAAGACAGCAACGCCCCGGTGGTCGTCGCAAACGGCCATCGCGGCGACGCACGCACGCC
GCGTCGAGCGCGCGGCCGGG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQSLDTLANRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTPD
EENQHFVAIIQEQRRIYKEAHDKLYTFSATPVAQALRERIDANNQAARALNQQVIDLDLAGKTDEAMPLLLQRAAPATQA
WQDALLEYSALQRQRAQEANALATTAMARGRAMLIGGGLAVVLISGLLAWLITRSLVVPLTRATRAAEAIAQGNLDNDVS
ANSNDETGRLLHAMDNMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMANDTNELVAAHIKVKMQTIHLIER
YAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQLAQAAASGDFTARGNAEQFQFDFRIMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMSGQYQGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSRKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTQMDETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPANARSAP
RPAARVTPVAASPRRSTTANAASAADVADWQEF

Sequences:

>Translated_753_residues
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQSLDTLANRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTPD
EENQHFVAIIQEQRRIYKEAHDKLYTFSATPVAQALRERIDANNQAARALNQQVIDLDLAGKTDEAMPLLLQRAAPATQA
WQDALLEYSALQRQRAQEANALATTAMARGRAMLIGGGLAVVLISGLLAWLITRSLVVPLTRATRAAEAIAQGNLDNDVS
ANSNDETGRLLHAMDNMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMANDTNELVAAHIKVKMQTIHLIER
YAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQLAQAAASGDFTARGNAEQFQFDFRIMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMSGQYQGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSRKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTQMDETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPANARSAP
RPAARVTPVAASPRRSTTANAASAADVADWQEF
>Mature_753_residues
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQSLDTLANRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTPD
EENQHFVAIIQEQRRIYKEAHDKLYTFSATPVAQALRERIDANNQAARALNQQVIDLDLAGKTDEAMPLLLQRAAPATQA
WQDALLEYSALQRQRAQEANALATTAMARGRAMLIGGGLAVVLISGLLAWLITRSLVVPLTRATRAAEAIAQGNLDNDVS
ANSNDETGRLLHAMDNMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMANDTNELVAAHIKVKMQTIHLIER
YAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQLAQAAASGDFTARGNAEQFQFDFRIMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMSGQYQGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSRKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTQMDETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPANARSAP
RPAARVTPVAASPRRSTTANAASAADVADWQEF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=346, Percent_Identity=56.6473988439306, Blast_Score=298, Evalue=7e-82,
Organism=Escherichia coli, GI1788195, Length=319, Percent_Identity=55.7993730407524, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1788194, Length=306, Percent_Identity=56.5359477124183, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1787690, Length=300, Percent_Identity=54.6666666666667, Blast_Score=279, Evalue=6e-76,
Organism=Escherichia coli, GI1789453, Length=235, Percent_Identity=47.2340425531915, Blast_Score=201, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 80136; Mature: 80136

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQSLDTLANRNMVIVQRLQEM
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NNAVSVIAVQLRNIVLPTPDEENQHFVAIIQEQRRIYKEAHDKLYTFSATPVAQALRERI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHH
DANNQAARALNQQVIDLDLAGKTDEAMPLLLQRAAPATQAWQDALLEYSALQRQRAQEAN
CCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALATTAMARGRAMLIGGGLAVVLISGLLAWLITRSLVVPLTRATRAAEAIAQGNLDNDVS
HHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ANSNDETGRLLHAMDNMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMANDT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCH
NELVAAHIKVKMQTIHLIERYAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAQAAASGDFTARGNAEQFQFDFRIMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
SGQYQGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
AEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
DDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISSASQEQYAGIEQVNQTVTQMD
HHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPANARSAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
RPAARVTPVAASPRRSTTANAASAADVADWQEF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQSLDTLANRNMVIVQRLQEM
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NNAVSVIAVQLRNIVLPTPDEENQHFVAIIQEQRRIYKEAHDKLYTFSATPVAQALRERI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHH
DANNQAARALNQQVIDLDLAGKTDEAMPLLLQRAAPATQAWQDALLEYSALQRQRAQEAN
CCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALATTAMARGRAMLIGGGLAVVLISGLLAWLITRSLVVPLTRATRAAEAIAQGNLDNDVS
HHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ANSNDETGRLLHAMDNMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMANDT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCH
NELVAAHIKVKMQTIHLIERYAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAQAAASGDFTARGNAEQFQFDFRIMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
SGQYQGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
AEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
DDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISSASQEQYAGIEQVNQTVTQMD
HHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPANARSAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
RPAARVTPVAASPRRSTTANAASAADVADWQEF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]