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The map label for this gene is tsr [H]

Identifier: 78047495

GI number: 78047495

Start: 2196088

End: 2198430

Strand: Reverse

Name: tsr [H]

Synonym: XCV1939

Alternate gene names: 78047495

Gene position: 2198430-2196088 (Counterclockwise)

Preceding gene: 78047496

Following gene: 78047494

Centisome position: 42.45

GC content: 63.68

Gene sequence:

>2343_bases
ATGACAAGCAGACGCGAGCGCAGCGCGCCTTGCTGGCCTGTCGACGCAACCGTATCCCATCCTTTTGAGCCGAGCGATCC
CATGACCTCTCTTTTACTGCGTTTCAATGTCGGGCCGCGCCTGGCGGCCGCCTTCACTGTGCTGATCCTGCTGTCCGGGT
TCATCGCCTTCATCGGCTACCGCGGGCTGAGTTCTGCACGTGCGCTGGTGGATGCCTTGGTGCACCAGAACATGACCAAG
ATCCGCCTCTCCAACGACATGATGAATGCCAACTACATCATTGCTGCCGAGTTACGCAACGTGGTGCTGCCGACCAGCGA
TGCGGACAATCTGAAATTCGTCGAGAAGATCAAGGCCGCGCGTGCCGACTATTCAAAAGCGCGCGAAGCCCTCTACGCCA
TGCCGGTCTCGCCGCAAGGCCAAATCATCCGGGACGACATCGATCGCCTCATTCCGCAAGTACGCGAATTGAACAATCAG
ATCATCGACCTGGTGATGTCCGGCCACAGCGACGAAGCCTTGCCGTTGCTGCTCACCAAAGCCGCACCCGCGCTGCAGCG
GTGGCAGGACAAGATCGGCGAGAACATCGCCTTGCAGGACAAATTAGCTGCCGAAGCGGCTGCGGTGGCACTGCAATCGA
TGGACGATTCGCGCAAGTTGCTGATCGGCGGTTCGCTGATGGTGGTATTGCTGAGCGGCACCCTGGGCTTGCTGATCACC
CGCAGCCTCACCCGGCCGCTGAGCCGCGCCACCCGCGCTGCCGAAGCGATTGCCGAGGGCAGGCTCGATAACGCCGTGCA
TAGCGATGCCAGCGACGAAACCGGGCGTCTGCTGCAGGCCATGGACAAGATGCAGTCGCAGGTGCGCAACCTCATTACCG
CCCAGCTGGACATGGCCAAGCGCCACGATGCGGGCCAGGTGAGCTTCCGCATGGATGCCGGCGTGTTCCCCGGTGACTAC
GGCCGCATGGCCGGCGACACCAATGCGCTGGTCGACAGCCACATCCAGGTCACCGCGCGCCTGGCGCAGATCATGGGCCG
CTATGCGATCGGCGACCTCAGCGACGACATGGACGCCCTGCCCGGCGAACAGGCCAAACTCACCGAGACCATGGCGCAGG
TCAAACACAACCTGGCCGCGATGAATCGGCAGATCAAGCAGCTGGCACAGGCCGCCGCGGCCGGCGACTTCAGTGCTCGC
GGCGACGCAGTGCAGTTCCAGTACGACTTCCGCATCATGGTCGAGAGCCTCAACCAGCTGATGGCCACTGCCGATGGCAG
CCTGCAAGCGTTGTCGGGCATGTTGCAGGCCATTGCTGCGGGCGATCTCACTGCGCGCATGGATGGCCAATTCCAGGGTG
TGTTTGCGCAGATGCGCGACGATGCCAATGCCACGGTGACGCAACTGGCCGGTATCGTCGGGCACATCCAGACCTCGGCG
GTCTCGATCAATGCGGCTGCCAGCGAAATTGCCGCCGGCAACAACGACCTGTCGCAACGTACCGAACAGCAGGCCGCCAA
CCTGGAAGAAACCGCTGCCTCGATGGAAGAGCTCACCTCTACCGTCAAGCAGAATGCCGAGGGCGCACGCCAGGCCAATC
AACTGGCGATCGGTGCGGCCAGCGTGGCGTCGCAAGGCGGCGAGGTCGTCGGCAAGGTCGTGGACACCATGGCGGGCATC
CAGGCCTCGTCGAAGAAGATCGCCGACATCATCTCCGTCATCGACGGCATCGCGTTCCAGACCAATATCCTGGCCTTGAA
TGCGGCGGTGGAAGCGGCACGTGCCGGCGAGCAGGGCCGCGGCTTTGCCGTGGTGGCCAGTGAAGTGCGTACGCTGGCGC
AGCGTTCCTCAGCCGCCGCCAAGGAGATCAAGGACCTGATCGGCGACTCGGTGCAGCGCGTCACCGACGGCTCGCAGCTG
GTGGACCAGGCGGGCCGCACCATGGCCGAAATCGTCTCATCGGTGCAGCGCGTCACCGACATCATGGGCGAAATTTCCGC
TGCCTCGCAGGAGCAATCGGCCGGCATCGAACAGGTCAACCTCACCGTCACGCAGATGGATGAGGCCACCCAACAGAACG
CTGCCCTGGTGGAAGAAGCCACTGCCGCCGCGCGCGCGATGGAAGAACAGGCACAGCAACTCACCGAAGCGGTGGCGGTC
TTCAAGGTCGATGCGAACGCACCGGTGGCACGCAAGTTGTCAGCCATCGCCAGCGCTGTGAGCCACCAGCGGCCGGCGAC
GCGCCCGGCTGCACGTGCCGCCGTGGCCGCGGCGACACCGCGGCGCGTGGCAGTGAGTGCAACCACGTCGACCGTTGGCG
ATGGCAATTGGCAGGAGTTTTAA

Upstream 100 bases:

>100_bases
GCGCTCACCCACACGCGCCCATCACTTGTCTGAGAACGCGCTTTACCAGCTGGCATCCCACGCTCAATCGACTGCAGGAC
GCGCCGTTACCAAGGGCGTG

Downstream 100 bases:

>100_bases
GCGACGGCGCCGGAGCCCACCGGTCGCCGGCAGTGGCGGGCGACCGGCACCGCCAGCGGGATCGTTTTTAGTCGCGGTGG
TGCATTCGGCCGCCGTACTC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 780; Mature: 779

Protein sequence:

>780_residues
MTSRRERSAPCWPVDATVSHPFEPSDPMTSLLLRFNVGPRLAAAFTVLILLSGFIAFIGYRGLSSARALVDALVHQNMTK
IRLSNDMMNANYIIAAELRNVVLPTSDADNLKFVEKIKAARADYSKAREALYAMPVSPQGQIIRDDIDRLIPQVRELNNQ
IIDLVMSGHSDEALPLLLTKAAPALQRWQDKIGENIALQDKLAAEAAAVALQSMDDSRKLLIGGSLMVVLLSGTLGLLIT
RSLTRPLSRATRAAEAIAEGRLDNAVHSDASDETGRLLQAMDKMQSQVRNLITAQLDMAKRHDAGQVSFRMDAGVFPGDY
GRMAGDTNALVDSHIQVTARLAQIMGRYAIGDLSDDMDALPGEQAKLTETMAQVKHNLAAMNRQIKQLAQAAAAGDFSAR
GDAVQFQYDFRIMVESLNQLMATADGSLQALSGMLQAIAAGDLTARMDGQFQGVFAQMRDDANATVTQLAGIVGHIQTSA
VSINAAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEGARQANQLAIGAASVASQGGEVVGKVVDTMAGI
QASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSAAAKEIKDLIGDSVQRVTDGSQL
VDQAGRTMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAQQLTEAVAV
FKVDANAPVARKLSAIASAVSHQRPATRPAARAAVAAATPRRVAVSATTSTVGDGNWQEF

Sequences:

>Translated_780_residues
MTSRRERSAPCWPVDATVSHPFEPSDPMTSLLLRFNVGPRLAAAFTVLILLSGFIAFIGYRGLSSARALVDALVHQNMTK
IRLSNDMMNANYIIAAELRNVVLPTSDADNLKFVEKIKAARADYSKAREALYAMPVSPQGQIIRDDIDRLIPQVRELNNQ
IIDLVMSGHSDEALPLLLTKAAPALQRWQDKIGENIALQDKLAAEAAAVALQSMDDSRKLLIGGSLMVVLLSGTLGLLIT
RSLTRPLSRATRAAEAIAEGRLDNAVHSDASDETGRLLQAMDKMQSQVRNLITAQLDMAKRHDAGQVSFRMDAGVFPGDY
GRMAGDTNALVDSHIQVTARLAQIMGRYAIGDLSDDMDALPGEQAKLTETMAQVKHNLAAMNRQIKQLAQAAAAGDFSAR
GDAVQFQYDFRIMVESLNQLMATADGSLQALSGMLQAIAAGDLTARMDGQFQGVFAQMRDDANATVTQLAGIVGHIQTSA
VSINAAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEGARQANQLAIGAASVASQGGEVVGKVVDTMAGI
QASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSAAAKEIKDLIGDSVQRVTDGSQL
VDQAGRTMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAQQLTEAVAV
FKVDANAPVARKLSAIASAVSHQRPATRPAARAAVAAATPRRVAVSATTSTVGDGNWQEF
>Mature_779_residues
TSRRERSAPCWPVDATVSHPFEPSDPMTSLLLRFNVGPRLAAAFTVLILLSGFIAFIGYRGLSSARALVDALVHQNMTKI
RLSNDMMNANYIIAAELRNVVLPTSDADNLKFVEKIKAARADYSKAREALYAMPVSPQGQIIRDDIDRLIPQVRELNNQI
IDLVMSGHSDEALPLLLTKAAPALQRWQDKIGENIALQDKLAAEAAAVALQSMDDSRKLLIGGSLMVVLLSGTLGLLITR
SLTRPLSRATRAAEAIAEGRLDNAVHSDASDETGRLLQAMDKMQSQVRNLITAQLDMAKRHDAGQVSFRMDAGVFPGDYG
RMAGDTNALVDSHIQVTARLAQIMGRYAIGDLSDDMDALPGEQAKLTETMAQVKHNLAAMNRQIKQLAQAAAAGDFSARG
DAVQFQYDFRIMVESLNQLMATADGSLQALSGMLQAIAAGDLTARMDGQFQGVFAQMRDDANATVTQLAGIVGHIQTSAV
SINAAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEGARQANQLAIGAASVASQGGEVVGKVVDTMAGIQ
ASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSAAAKEIKDLIGDSVQRVTDGSQLV
DQAGRTMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAQQLTEAVAVF
KVDANAPVARKLSAIASAVSHQRPATRPAARAAVAAATPRRVAVSATTSTVGDGNWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=346, Percent_Identity=58.3815028901734, Blast_Score=313, Evalue=3e-86,
Organism=Escherichia coli, GI1788195, Length=350, Percent_Identity=56.5714285714286, Blast_Score=300, Evalue=3e-82,
Organism=Escherichia coli, GI1788194, Length=302, Percent_Identity=56.953642384106, Blast_Score=287, Evalue=2e-78,
Organism=Escherichia coli, GI1787690, Length=300, Percent_Identity=55.3333333333333, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=43.6, Blast_Score=198, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 82737; Mature: 82606

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRERSAPCWPVDATVSHPFEPSDPMTSLLLRFNVGPRLAAAFTVLILLSGFIAFIGY
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RGLSSARALVDALVHQNMTKIRLSNDMMNANYIIAAELRNVVLPTSDADNLKFVEKIKAA
CCCHHHHHHHHHHHHCCHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
RADYSKAREALYAMPVSPQGQIIRDDIDRLIPQVRELNNQIIDLVMSGHSDEALPLLLTK
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AAPALQRWQDKIGENIALQDKLAAEAAAVALQSMDDSRKLLIGGSLMVVLLSGTLGLLIT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHH
RSLTRPLSRATRAAEAIAEGRLDNAVHSDASDETGRLLQAMDKMQSQVRNLITAQLDMAK
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHDAGQVSFRMDAGVFPGDYGRMAGDTNALVDSHIQVTARLAQIMGRYAIGDLSDDMDAL
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
PGEQAKLTETMAQVKHNLAAMNRQIKQLAQAAAAGDFSARGDAVQFQYDFRIMVESLNQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHH
MATADGSLQALSGMLQAIAAGDLTARMDGQFQGVFAQMRDDANATVTQLAGIVGHIQTSA
HHHCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VSINAAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEGARQANQLAIGAA
EEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVASQGGEVVGKVVDTMAGIQASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR
HHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC
GFAVVASEVRTLAQRSSAAAKEIKDLIGDSVQRVTDGSQLVDQAGRTMAEIVSSVQRVTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAQQLTEAVAV
HHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKVDANAPVARKLSAIASAVSHQRPATRPAARAAVAAATPRRVAVSATTSTVGDGNWQEF
EEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TSRRERSAPCWPVDATVSHPFEPSDPMTSLLLRFNVGPRLAAAFTVLILLSGFIAFIGY
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RGLSSARALVDALVHQNMTKIRLSNDMMNANYIIAAELRNVVLPTSDADNLKFVEKIKAA
CCCHHHHHHHHHHHHCCHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
RADYSKAREALYAMPVSPQGQIIRDDIDRLIPQVRELNNQIIDLVMSGHSDEALPLLLTK
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AAPALQRWQDKIGENIALQDKLAAEAAAVALQSMDDSRKLLIGGSLMVVLLSGTLGLLIT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHH
RSLTRPLSRATRAAEAIAEGRLDNAVHSDASDETGRLLQAMDKMQSQVRNLITAQLDMAK
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHDAGQVSFRMDAGVFPGDYGRMAGDTNALVDSHIQVTARLAQIMGRYAIGDLSDDMDAL
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
PGEQAKLTETMAQVKHNLAAMNRQIKQLAQAAAAGDFSARGDAVQFQYDFRIMVESLNQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHH
MATADGSLQALSGMLQAIAAGDLTARMDGQFQGVFAQMRDDANATVTQLAGIVGHIQTSA
HHHCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VSINAAASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEGARQANQLAIGAA
EEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVASQGGEVVGKVVDTMAGIQASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR
HHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC
GFAVVASEVRTLAQRSSAAAKEIKDLIGDSVQRVTDGSQLVDQAGRTMAEIVSSVQRVTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAQQLTEAVAV
HHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKVDANAPVARKLSAIASAVSHQRPATRPAARAAVAAATPRRVAVSATTSTVGDGNWQEF
EEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]