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The map label for this gene is tcp [H]

Identifier: 78047494

GI number: 78047494

Start: 2192770

End: 2195439

Strand: Reverse

Name: tcp [H]

Synonym: XCV1938

Alternate gene names: 78047494

Gene position: 2195439-2192770 (Counterclockwise)

Preceding gene: 78047495

Following gene: 78047493

Centisome position: 42.4

GC content: 65.92

Gene sequence:

>2670_bases
ATGCATTCCTTCAACCGCCTCTCGGTCGGTACGCGGCTCTCCGCACTGCTCACGCTGGTCATCGCCATTTCGCTGGGGCT
GCTGGCCCTGACCATCTATCGCCAGTCCGCTGGCGATATCGAATCGCAGGTCAAGGCCGAGCTGCGCTCCAGCACCCGAC
TGATGCAGCAGTCGGTGGCGATGTACGACGTCACGCTCAGCGAAGGCACCCAGCGTCTGGGCAGCGTGTTCGACGACATG
CTCCCCACCGGCGCGCGCGAACTCGATAGCGCCAGCACGGTCACCATCGGCGAGCAGAACACCCCCTCGCTGCGTGCCGG
CAAGCAGGCATTGAATCTCAATTTCGACGCCGTGGACCGCTTTGCCAAGGCGACCGGCGGCGTTGCCACGATCTTCGCCC
GTATCGGCGACGACTTCGTGCGCATCACCACCTCGCTGCGTAACAAGCAGAACGAACGCGTCATCGGCACCCTGCTCGAT
CGCAAGGGCAAGGCCTACGCCGCCCTGTCGCAAGGCAAGAGCTTCACCGGCCAGGCGCAGCTGTTCGGCGAGCAGTACAT
GACCCATTACCAGCCGCTGCGCGATGCCGCCGGCGAGGTCATTGGCGCGCTGTTCGTCGGGCGCAACTACACCCAAGGCC
TGGCCGCGCTCAAGGCCCAGGTCAGCACCACCAAACTGGGCCAGGACGGCTATTTCGTCATTGCCGACATGGCGCCGGGC
GATCACCAGGGCCAGATCATCGCGGCTCCGCCGGGCACCCCGGCCACATTAGCGGCACTGGTGCCGGCCGAACAGCAGGC
CCTGTTGCAGGCAGTGCTGGACGGCAAGCAGCCCAGCGCCAACCTGCAGCTGCGCGATGGCAAGGGCGCCAGCCAGGCCT
TCGAAGTCACCGCACAGCGCTACGCGCCGTGGCAGTGGGCAGTGATTGGCGCGCAGCCGCGCAGTGCCATCGACGGCCCG
CTGGACGCGCTGATGGGCAGCATGCTGCTGTTCTCGCTGGTGGTGCTGGCACTGTGCATCGCGGTGGTGTTCATTGCCGC
GCGCAAGATGGTCACCCGCCCGCTGCTGGCAGTGGAACGCGTGCTTGGCGACGTGGCGGCCGGCCGCCTGGACAACGCGA
TTGACATCGACCGGCATGACGAACTCGGTCGCCTGCTGCTCAACGCGCGCACCATGCGCGATGACCTGCGCGCGCGCCTG
GAACGCGACCACCTGATCGCCAGCGAAGCACTGCGCGTGCGCACCGCCTTGGACGACGTCAGCACCAATGTGATGATCGC
CGACGCCGAGCGCCGCATCATTTACGTCAATCGCCCGCTGCAGCGCATGCTGTCGGAGATGCAGGACGTCCTGCGGCACG
ATCTTCCCAACTTCGATGCCGCTGCACTGGGCAATACCCGCATCGACCAGTTCCATCGCAATCCCGAGCAGGCACGCCTG
CTGGATCAACTCAAGAGTACGCACACCGCACAGGTCGAAATCGGCGGCCGCATCGTGCACGAAGTGGTCAGCCCGGTCGT
GGCTGCCACCGGCGAGCGCATGGGCTATGTGGTCGAATGGAGCGACCGTACCCAGGAAGTGCAGGTTGAACAGGAAGTCG
CGCACGTGGTGGAAGCCGCCGCGGCCGGCGACCTCAGCGAGCGGATCGACGTGCGCGGCAAGCAGGGCTTCCTGTTGCTG
CTGGCCCAACAGCTCAACACATTGCTGGACAACAACGCCGACGGTCTGTCGCGCGTCTCCGCCCTGCTCTCGTCGCTGTC
GCAAGGCGACCTGACCGCACGCATGGACGGCGCGCTGCAGGGCGTCTTCGCCACCATCCGCGACGACGCCAACGCCACCG
CCGACCAGTTGGCCAGTATCGTGCGCCGCATCAAGGACTCGTCGCTGACGATCAATTCGGCCGCCACCGAAATCGCCACC
GGCAACGGCGACCTGTCGCGTCGCACCGAACAGCAAGCGGCCGCGCTGGAAGAAACCGCAGCCTCCATGGAAGAGCTCAC
CGCCACCGTCAAGCAGAACGCCGACAACGCCGACCAGGCCAATCGCCTGGTGCTGGATGCTGCCGGTGTGGCGGCAAAGG
GCGGCGATGTGGTGAACCGCGTGGTCACCACCATGGCCGATATCGACGCCTCGTCGAAAAAGATTGCCGAGATCATCAGC
GTGATCGACGGCATCGCCTTCCAGACCAATATCCTGGCCTTGAACGCGGCGGTGGAAGCGGCGCGTGCCGGCGAGCAGGG
TCGTGGCTTTGCTGTGGTGGCCTCGGAGGTCCGTACGTTGGCACAGCGCTCGGCCGGCGCGGCCAAGGAGATCAAGCACC
TGATCGAAGACTCGGTCACCCGCATCGGCAACGGCGCGGCACTGGCTTCCGAAGCCGGCAGCACCATGCAGCAGGTGGTG
ACCTCGGTACAGCGCGTCACCGACATCATGGGCGAAATCACCAGCGCTTCGCGCGAGCAGGCCGCAGGCATCACCCAGGT
CAACCAGACCGTCACCCAGATGGACGAAACCACCCAGCAGAACGCCGCGCTGGTGGAAGAAGCCACTGCCGCCGCGCGCT
CGATGGAAGACCAGGCCGCACAGTTGGTGGATGCGGTGGCAGTGTTCCGCCTGGAGCCACAGGACCGCCTGAGCACCCTG
CTGTCCAACGCACGCCATGCCTACAGCTGA

Upstream 100 bases:

>100_bases
TTTGTGCTGATTTCAACGGGAACAATCAATTTCGAGCATAAACGGCCGCTACCAAGCTCACGCATTCGTAACGCCCTCCC
CCGGGCAAGGTCGATTCCTC

Downstream 100 bases:

>100_bases
GACGGCAACGACGATTCATTGCAGCCAGATCACAGCATCGAGGGCGCGCTGCCCTCACCGCCCGCGGGACATGCCATAAA
ACCGTCCATGGCGGCTCGAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 889; Mature: 889

Protein sequence:

>889_residues
MHSFNRLSVGTRLSALLTLVIAISLGLLALTIYRQSAGDIESQVKAELRSSTRLMQQSVAMYDVTLSEGTQRLGSVFDDM
LPTGARELDSASTVTIGEQNTPSLRAGKQALNLNFDAVDRFAKATGGVATIFARIGDDFVRITTSLRNKQNERVIGTLLD
RKGKAYAALSQGKSFTGQAQLFGEQYMTHYQPLRDAAGEVIGALFVGRNYTQGLAALKAQVSTTKLGQDGYFVIADMAPG
DHQGQIIAAPPGTPATLAALVPAEQQALLQAVLDGKQPSANLQLRDGKGASQAFEVTAQRYAPWQWAVIGAQPRSAIDGP
LDALMGSMLLFSLVVLALCIAVVFIAARKMVTRPLLAVERVLGDVAAGRLDNAIDIDRHDELGRLLLNARTMRDDLRARL
ERDHLIASEALRVRTALDDVSTNVMIADAERRIIYVNRPLQRMLSEMQDVLRHDLPNFDAAALGNTRIDQFHRNPEQARL
LDQLKSTHTAQVEIGGRIVHEVVSPVVAATGERMGYVVEWSDRTQEVQVEQEVAHVVEAAAAGDLSERIDVRGKQGFLLL
LAQQLNTLLDNNADGLSRVSALLSSLSQGDLTARMDGALQGVFATIRDDANATADQLASIVRRIKDSSLTINSAATEIAT
GNGDLSRRTEQQAAALEETAASMEELTATVKQNADNADQANRLVLDAAGVAAKGGDVVNRVVTTMADIDASSKKIAEIIS
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVTRIGNGAALASEAGSTMQQVV
TSVQRVTDIMGEITSASREQAAGITQVNQTVTQMDETTQQNAALVEEATAAARSMEDQAAQLVDAVAVFRLEPQDRLSTL
LSNARHAYS

Sequences:

>Translated_889_residues
MHSFNRLSVGTRLSALLTLVIAISLGLLALTIYRQSAGDIESQVKAELRSSTRLMQQSVAMYDVTLSEGTQRLGSVFDDM
LPTGARELDSASTVTIGEQNTPSLRAGKQALNLNFDAVDRFAKATGGVATIFARIGDDFVRITTSLRNKQNERVIGTLLD
RKGKAYAALSQGKSFTGQAQLFGEQYMTHYQPLRDAAGEVIGALFVGRNYTQGLAALKAQVSTTKLGQDGYFVIADMAPG
DHQGQIIAAPPGTPATLAALVPAEQQALLQAVLDGKQPSANLQLRDGKGASQAFEVTAQRYAPWQWAVIGAQPRSAIDGP
LDALMGSMLLFSLVVLALCIAVVFIAARKMVTRPLLAVERVLGDVAAGRLDNAIDIDRHDELGRLLLNARTMRDDLRARL
ERDHLIASEALRVRTALDDVSTNVMIADAERRIIYVNRPLQRMLSEMQDVLRHDLPNFDAAALGNTRIDQFHRNPEQARL
LDQLKSTHTAQVEIGGRIVHEVVSPVVAATGERMGYVVEWSDRTQEVQVEQEVAHVVEAAAAGDLSERIDVRGKQGFLLL
LAQQLNTLLDNNADGLSRVSALLSSLSQGDLTARMDGALQGVFATIRDDANATADQLASIVRRIKDSSLTINSAATEIAT
GNGDLSRRTEQQAAALEETAASMEELTATVKQNADNADQANRLVLDAAGVAAKGGDVVNRVVTTMADIDASSKKIAEIIS
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVTRIGNGAALASEAGSTMQQVV
TSVQRVTDIMGEITSASREQAAGITQVNQTVTQMDETTQQNAALVEEATAAARSMEDQAAQLVDAVAVFRLEPQDRLSTL
LSNARHAYS
>Mature_889_residues
MHSFNRLSVGTRLSALLTLVIAISLGLLALTIYRQSAGDIESQVKAELRSSTRLMQQSVAMYDVTLSEGTQRLGSVFDDM
LPTGARELDSASTVTIGEQNTPSLRAGKQALNLNFDAVDRFAKATGGVATIFARIGDDFVRITTSLRNKQNERVIGTLLD
RKGKAYAALSQGKSFTGQAQLFGEQYMTHYQPLRDAAGEVIGALFVGRNYTQGLAALKAQVSTTKLGQDGYFVIADMAPG
DHQGQIIAAPPGTPATLAALVPAEQQALLQAVLDGKQPSANLQLRDGKGASQAFEVTAQRYAPWQWAVIGAQPRSAIDGP
LDALMGSMLLFSLVVLALCIAVVFIAARKMVTRPLLAVERVLGDVAAGRLDNAIDIDRHDELGRLLLNARTMRDDLRARL
ERDHLIASEALRVRTALDDVSTNVMIADAERRIIYVNRPLQRMLSEMQDVLRHDLPNFDAAALGNTRIDQFHRNPEQARL
LDQLKSTHTAQVEIGGRIVHEVVSPVVAATGERMGYVVEWSDRTQEVQVEQEVAHVVEAAAAGDLSERIDVRGKQGFLLL
LAQQLNTLLDNNADGLSRVSALLSSLSQGDLTARMDGALQGVFATIRDDANATADQLASIVRRIKDSSLTINSAATEIAT
GNGDLSRRTEQQAAALEETAASMEELTATVKQNADNADQANRLVLDAAGVAAKGGDVVNRVVTTMADIDASSKKIAEIIS
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVTRIGNGAALASEAGSTMQQVV
TSVQRVTDIMGEITSASREQAAGITQVNQTVTQMDETTQQNAALVEEATAAARSMEDQAAQLVDAVAVFRLEPQDRLSTL
LSNARHAYS

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=261, Percent_Identity=66.2835249042146, Blast_Score=289, Evalue=5e-79,
Organism=Escherichia coli, GI1788195, Length=255, Percent_Identity=65.4901960784314, Blast_Score=284, Evalue=2e-77,
Organism=Escherichia coli, GI1787690, Length=292, Percent_Identity=55.4794520547945, Blast_Score=278, Evalue=9e-76,
Organism=Escherichia coli, GI1788194, Length=277, Percent_Identity=58.1227436823105, Blast_Score=277, Evalue=2e-75,
Organism=Escherichia coli, GI1789453, Length=241, Percent_Identity=42.3236514522822, Blast_Score=188, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 95179; Mature: 95179

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSFNRLSVGTRLSALLTLVIAISLGLLALTIYRQSAGDIESQVKAELRSSTRLMQQSVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MYDVTLSEGTQRLGSVFDDMLPTGARELDSASTVTIGEQNTPSLRAGKQALNLNFDAVDR
HHEEHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEECCCCCCCHHHCCHHHCCCHHHHHH
FAKATGGVATIFARIGDDFVRITTSLRNKQNERVIGTLLDRKGKAYAALSQGKSFTGQAQ
HHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHH
LFGEQYMTHYQPLRDAAGEVIGALFVGRNYTQGLAALKAQVSTTKLGQDGYFVIADMAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEEEECCCC
DHQGQIIAAPPGTPATLAALVPAEQQALLQAVLDGKQPSANLQLRDGKGASQAFEVTAQR
CCCCEEEECCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
YAPWQWAVIGAQPRSAIDGPLDALMGSMLLFSLVVLALCIAVVFIAARKMVTRPLLAVER
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGDVAAGRLDNAIDIDRHDELGRLLLNARTMRDDLRARLERDHLIASEALRVRTALDDV
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STNVMIADAERRIIYVNRPLQRMLSEMQDVLRHDLPNFDAAALGNTRIDQFHRNPEQARL
CCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCHHHHHH
LDQLKSTHTAQVEIGGRIVHEVVSPVVAATGERMGYVVEWSDRTQEVQVEQEVAHVVEAA
HHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
AAGDLSERIDVRGKQGFLLLLAQQLNTLLDNNADGLSRVSALLSSLSQGDLTARMDGALQ
HHCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
GVFATIRDDANATADQLASIVRRIKDSSLTINSAATEIATGNGDLSRRTEQQAAALEETA
HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHH
ASMEELTATVKQNADNADQANRLVLDAAGVAAKGGDVVNRVVTTMADIDASSKKIAEIIS
HHHHHHHHHHHHCCCCCHHHCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVT
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RIGNGAALASEAGSTMQQVVTSVQRVTDIMGEITSASREQAAGITQVNQTVTQMDETTQQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NAALVEEATAAARSMEDQAAQLVDAVAVFRLEPQDRLSTLLSNARHAYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSFNRLSVGTRLSALLTLVIAISLGLLALTIYRQSAGDIESQVKAELRSSTRLMQQSVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MYDVTLSEGTQRLGSVFDDMLPTGARELDSASTVTIGEQNTPSLRAGKQALNLNFDAVDR
HHEEHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEECCCCCCCHHHCCHHHCCCHHHHHH
FAKATGGVATIFARIGDDFVRITTSLRNKQNERVIGTLLDRKGKAYAALSQGKSFTGQAQ
HHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHH
LFGEQYMTHYQPLRDAAGEVIGALFVGRNYTQGLAALKAQVSTTKLGQDGYFVIADMAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEEEECCCC
DHQGQIIAAPPGTPATLAALVPAEQQALLQAVLDGKQPSANLQLRDGKGASQAFEVTAQR
CCCCEEEECCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
YAPWQWAVIGAQPRSAIDGPLDALMGSMLLFSLVVLALCIAVVFIAARKMVTRPLLAVER
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGDVAAGRLDNAIDIDRHDELGRLLLNARTMRDDLRARLERDHLIASEALRVRTALDDV
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STNVMIADAERRIIYVNRPLQRMLSEMQDVLRHDLPNFDAAALGNTRIDQFHRNPEQARL
CCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCHHHHHH
LDQLKSTHTAQVEIGGRIVHEVVSPVVAATGERMGYVVEWSDRTQEVQVEQEVAHVVEAA
HHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
AAGDLSERIDVRGKQGFLLLLAQQLNTLLDNNADGLSRVSALLSSLSQGDLTARMDGALQ
HHCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
GVFATIRDDANATADQLASIVRRIKDSSLTINSAATEIATGNGDLSRRTEQQAAALEETA
HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHH
ASMEELTATVKQNADNADQANRLVLDAAGVAAKGGDVVNRVVTTMADIDASSKKIAEIIS
HHHHHHHHHHHHCCCCCHHHCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIEDSVT
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RIGNGAALASEAGSTMQQVVTSVQRVTDIMGEITSASREQAAGITQVNQTVTQMDETTQQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NAALVEEATAAARSMEDQAAQLVDAVAVFRLEPQDRLSTLLSNARHAYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]