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The map label for this gene is 78047265

Identifier: 78047265

GI number: 78047265

Start: 1929885

End: 1930592

Strand: Reverse

Name: 78047265

Synonym: XCV1709

Alternate gene names: NA

Gene position: 1930592-1929885 (Counterclockwise)

Preceding gene: 78047266

Following gene: 78047262

Centisome position: 37.28

GC content: 66.67

Gene sequence:

>708_bases
ATGGTGATGGCGGGTTTTTATATCGCAAGCGCCGTGCTGGTGGCGCTGGCCTTGCTGCTGTTGCTGGCACCGCTGCTGCG
CCGCCCCACCGGCAGCGGTCGTGCGCGTTACCGCTTGGCAATTCTGCTGGGACTGGGCCTGCCGCTGGCCACGGCCGGGT
TGTACCGGCTGGTGGGCGCGCCGGAGGCGATCGTCACGCATGTGTATGCAGCGCAGCCAGCGCAAGTCGCCTCGCTACCA
CCCTCTGCGGATGCAGGGCAGGCGCAAGCGGCAAGCACCCCTGCCAATGCGCAGGCGCAGGCGCTGGATCGCTTCATGCA
GCAGGCCAAGACATTCGAGCAGAACGACCGACCCGCCGAGGCGCGCGAAGCGTATGCACAAGTGCTCAAGATCGCTCCCG
ACATCAGCGCCGCCATTGTGGGCTGGGTGGCGGCGGATATGGCCACGCACGCCGATTTCGCCATCGACGCCGCATCGCGC
ACACGCCTGCAGCAAGTGATCGCACGCGAGCCGGACAACCAGCGTGGACTCTGGTTGCTAGGCATCAGCGATTTTCAGCA
GCAGGACTTCGCCGCCGCCACTGCGCACTGGCGGCATCTGCACGGTTTGCTGGAAACCGGATCGCCGATGCAGAAGGCGG
TGGCAGACAAGATCGCGGTGGCCGAATCGATGGCCAGCGCGCGGCAATCCGCGCGTGGGACGCGCTGA

Upstream 100 bases:

>100_bases
GGCCGGCGCTGATGTTGCTTGCAGGTGCCGGCGTGGTCATCCACACCGTGCGCACCCGTGCGCGCGCCGGCACGCCGGTG
GCGCCGCAAGTGGAGGACCA

Downstream 100 bases:

>100_bases
GCAACGCATCCTGCGCGATGCGGCTTGATTGCGATGGCTGCACTGCAGCGCAATTGCACAGCGCGTGCGCAATGCCAAGC
AGCCGGTTCACGCGCGAGAC

Product: putative C-type cytochrome biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MVMAGFYIASAVLVALALLLLLAPLLRRPTGSGRARYRLAILLGLGLPLATAGLYRLVGAPEAIVTHVYAAQPAQVASLP
PSADAGQAQAASTPANAQAQALDRFMQQAKTFEQNDRPAEAREAYAQVLKIAPDISAAIVGWVAADMATHADFAIDAASR
TRLQQVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR

Sequences:

>Translated_235_residues
MVMAGFYIASAVLVALALLLLLAPLLRRPTGSGRARYRLAILLGLGLPLATAGLYRLVGAPEAIVTHVYAAQPAQVASLP
PSADAGQAQAASTPANAQAQALDRFMQQAKTFEQNDRPAEAREAYAQVLKIAPDISAAIVGWVAADMATHADFAIDAASR
TRLQQVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR
>Mature_235_residues
MVMAGFYIASAVLVALALLLLLAPLLRRPTGSGRARYRLAILLGLGLPLATAGLYRLVGAPEAIVTHVYAAQPAQVASLP
PSADAGQAQAASTPANAQAQALDRFMQQAKTFEQNDRPAEAREAYAQVLKIAPDISAAIVGWVAADMATHADFAIDAASR
TRLQQVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR

Specific function: Unknown

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24927; Mature: 24927

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMAGFYIASAVLVALALLLLLAPLLRRPTGSGRARYRLAILLGLGLPLATAGLYRLVGA
CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PEAIVTHVYAAQPAQVASLPPSADAGQAQAASTPANAQAQALDRFMQQAKTFEQNDRPAE
CHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
AREAYAQVLKIAPDISAAIVGWVAADMATHADFAIDAASRTRLQQVIAREPDNQRGLWLL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
GISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR
ECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVMAGFYIASAVLVALALLLLLAPLLRRPTGSGRARYRLAILLGLGLPLATAGLYRLVGA
CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PEAIVTHVYAAQPAQVASLPPSADAGQAQAASTPANAQAQALDRFMQQAKTFEQNDRPAE
CHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
AREAYAQVLKIAPDISAAIVGWVAADMATHADFAIDAASRTRLQQVIAREPDNQRGLWLL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
GISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR
ECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA