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The map label for this gene is 78047017

Identifier: 78047017

GI number: 78047017

Start: 1640615

End: 1641370

Strand: Reverse

Name: 78047017

Synonym: XCV1461

Alternate gene names: NA

Gene position: 1641370-1640615 (Counterclockwise)

Preceding gene: 78047018

Following gene: 78047016

Centisome position: 31.7

GC content: 67.2

Gene sequence:

>756_bases
ATGTCTCCGCTCCTGCTGATCTCGCTGCTGCTGCAAGCCGCCTGCTGCGTCCACGTCGTGCGCAGCGGGCGGCCCCTGTA
CTGGATCTTCCTGCTGCTGGCGTTTTCGCTGCTGGCGGTGCTGGTCTATGTGTGCGTGGCGGTCATCCCCGATCTGCGCA
ACGACCCCAATGCACGCCGTCGCCTCAAGCGCGTGCGCAGCACCCTGGATCCGCAACGCGAACAGCGTGATGCCTCGCGC
CGGCTGGATGTGGCCGACACTCCGGAAAATCGCCGCCAGCTCGCAGAGACCTTGCTGGCGCGCGGCGATTACGCCCAGGC
CGCCGAGCATTACCAGGGCGCGTTGCGCGGCTTGTATCGCGATGATCCGCACCTGATGCTCGGTCTGGCCAAGGCCCAGT
TCGGGCTGGGCCAGCCACAGCAGACGCGGCAGACCCTGGATGCCTTGATCGCGGCCAACCCCAGCTTCCGCTCGCATGAC
GGGCATCTGCTGTATGCACGCGCGGTCGAAGGCAGCGGCGACACCGAGGCTGCGCTGCACGAGTACGAAACGCTGGCCCA
AGGCTATCCGGGCGAAGAAGCGCGCGTGCGCTATGCACAACTGCTGCAGCGCATCGCACGCAATGACCAGGCCAGGGCGG
TGTACGAACAGGTGCTGCGTCACGCCGCCGCCTCGCCCAAGCATTACCAACGCGAGCAACGCGCCTGGGTCGACCTGGCA
CGCAAGGGCCTGCGCGAGCTGGACACCAGCGCCTGA

Upstream 100 bases:

>100_bases
CTACGAGCGCCTGCGCAGCTATGGTGCCTACGAAGGGCATTGATTCGCACGATGGCCGGCCGCGCCCAGTGCGCGGCCAT
GGAAAGGACGCCACACCCGC

Downstream 100 bases:

>100_bases
GGGCCGCCGACAAGACGCTCGCAGCTGCAGGTCACATGCATTGAATCGCTCGGCAACGAATCGCTCGGCACCTGATCAAG
GCCATCAACGTGCAAAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSPLLLISLLLQAACCVHVVRSGRPLYWIFLLLAFSLLAVLVYVCVAVIPDLRNDPNARRRLKRVRSTLDPQREQRDASR
RLDVADTPENRRQLAETLLARGDYAQAAEHYQGALRGLYRDDPHLMLGLAKAQFGLGQPQQTRQTLDALIAANPSFRSHD
GHLLYARAVEGSGDTEAALHEYETLAQGYPGEEARVRYAQLLQRIARNDQARAVYEQVLRHAAASPKHYQREQRAWVDLA
RKGLRELDTSA

Sequences:

>Translated_251_residues
MSPLLLISLLLQAACCVHVVRSGRPLYWIFLLLAFSLLAVLVYVCVAVIPDLRNDPNARRRLKRVRSTLDPQREQRDASR
RLDVADTPENRRQLAETLLARGDYAQAAEHYQGALRGLYRDDPHLMLGLAKAQFGLGQPQQTRQTLDALIAANPSFRSHD
GHLLYARAVEGSGDTEAALHEYETLAQGYPGEEARVRYAQLLQRIARNDQARAVYEQVLRHAAASPKHYQREQRAWVDLA
RKGLRELDTSA
>Mature_250_residues
SPLLLISLLLQAACCVHVVRSGRPLYWIFLLLAFSLLAVLVYVCVAVIPDLRNDPNARRRLKRVRSTLDPQREQRDASRR
LDVADTPENRRQLAETLLARGDYAQAAEHYQGALRGLYRDDPHLMLGLAKAQFGLGQPQQTRQTLDALIAANPSFRSHDG
HLLYARAVEGSGDTEAALHEYETLAQGYPGEEARVRYAQLLQRIARNDQARAVYEQVLRHAAASPKHYQREQRAWVDLAR
KGLRELDTSA

Specific function: Unknown

COG id: COG4700

COG function: function code S; Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28341; Mature: 28209

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLLLISLLLQAACCVHVVRSGRPLYWIFLLLAFSLLAVLVYVCVAVIPDLRNDPNARR
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RLKRVRSTLDPQREQRDASRRLDVADTPENRRQLAETLLARGDYAQAAEHYQGALRGLYR
HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DDPHLMLGLAKAQFGLGQPQQTRQTLDALIAANPSFRSHDGHLLYARAVEGSGDTEAALH
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHH
EYETLAQGYPGEEARVRYAQLLQRIARNDQARAVYEQVLRHAAASPKHYQREQRAWVDLA
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RKGLRELDTSA
HHHHHHHCCCC
>Mature Secondary Structure 
SPLLLISLLLQAACCVHVVRSGRPLYWIFLLLAFSLLAVLVYVCVAVIPDLRNDPNARR
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RLKRVRSTLDPQREQRDASRRLDVADTPENRRQLAETLLARGDYAQAAEHYQGALRGLYR
HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DDPHLMLGLAKAQFGLGQPQQTRQTLDALIAANPSFRSHDGHLLYARAVEGSGDTEAALH
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHH
EYETLAQGYPGEEARVRYAQLLQRIARNDQARAVYEQVLRHAAASPKHYQREQRAWVDLA
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RKGLRELDTSA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA