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The map label for this gene is yaeR [H]

Identifier: 78047001

GI number: 78047001

Start: 1623120

End: 1623575

Strand: Reverse

Name: yaeR [H]

Synonym: XCV1445

Alternate gene names: 78047001

Gene position: 1623575-1623120 (Counterclockwise)

Preceding gene: 78047006

Following gene: 78047000

Centisome position: 31.35

GC content: 65.57

Gene sequence:

>456_bases
ATGCGAGGCGCCGTCGAGCGCGCCGGCACTGCCCGGCCGGTCAACGTCAATGCGCCGGAGCGCGGCATGATGCTCGCCGG
CATCCACCATGTGGCGATCATCGCCGGCGACTACGCGCGTTCCAAACGGTTCTATTGCCAGATCCTGGGCCTGCGCGTGC
TCGACGAGCATTACCGACAGGCGCGCGATTCGTGGAAGCTGGATCTGGCGCTGCCCGATGGCGGACAGATCGAGTTGTTC
TCGTTCCCCGCTGCCCCGGCAAGCCCCAGCCGCCCTGAAGCCCAAGGGCTGCGCCACCTTGCGTTTCGCGTCGCAGATCT
GGACAGCGCGGTTGCGCACCTCAATGCATCCGGCGTGGCCACCGAAGACATCCGCATCGACGAATACACCGGCCGCCGCT
TTACCTTTTTTGCAGATCCGGACGAGCTGCCGCTGGAGTTGTACGAGGTCGGCTAG

Upstream 100 bases:

>100_bases
TGCTTGCCGGGCGCTTGCCCATAAATCCGCCAAGGCCACAGCACGCTGCGTGCGATAGCGGTGCTGCGTCCTGCATCGCG
GACGGGCGCCTGCCATCTGC

Downstream 100 bases:

>100_bases
CGCGTATGCCTGACGGAACCGCAGTGCAGCGAGGCACGCGTACCCGTTGAGTCATGCGCCGACCTTCGCCTCGCTAAGGT
GTCGACCGCGTGACTCAAGC

Product: putative glyoxylase I family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRGAVERAGTARPVNVNAPERGMMLAGIHHVAIIAGDYARSKRFYCQILGLRVLDEHYRQARDSWKLDLALPDGGQIELF
SFPAAPASPSRPEAQGLRHLAFRVADLDSAVAHLNASGVATEDIRIDEYTGRRFTFFADPDELPLELYEVG

Sequences:

>Translated_151_residues
MRGAVERAGTARPVNVNAPERGMMLAGIHHVAIIAGDYARSKRFYCQILGLRVLDEHYRQARDSWKLDLALPDGGQIELF
SFPAAPASPSRPEAQGLRHLAFRVADLDSAVAHLNASGVATEDIRIDEYTGRRFTFFADPDELPLELYEVG
>Mature_151_residues
MRGAVERAGTARPVNVNAPERGMMLAGIHHVAIIAGDYARSKRFYCQILGLRVLDEHYRQARDSWKLDLALPDGGQIELF
SFPAAPASPSRPEAQGLRHLAFRVADLDSAVAHLNASGVATEDIRIDEYTGRRFTFFADPDELPLELYEVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywkD [H]

Homologues:

Organism=Escherichia coli, GI87081697, Length=125, Percent_Identity=65.6, Blast_Score=164, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 16691; Mature: 16691

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGAVERAGTARPVNVNAPERGMMLAGIHHVAIIAGDYARSKRFYCQILGLRVLDEHYRQ
CCCCCCCCCCCCCEECCCCCCCEEEECCEEEEEEECCCHHCHHEEEHHHHHHHHHHHHHH
ARDSWKLDLALPDGGQIELFSFPAAPASPSRPEAQGLRHLAFRVADLDSAVAHLNASGVA
HCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TEDIRIDEYTGRRFTFFADPDELPLELYEVG
ECCEEEECCCCCEEEEEECCCCCCEEEEECC
>Mature Secondary Structure
MRGAVERAGTARPVNVNAPERGMMLAGIHHVAIIAGDYARSKRFYCQILGLRVLDEHYRQ
CCCCCCCCCCCCCEECCCCCCCEEEECCEEEEEEECCCHHCHHEEEHHHHHHHHHHHHHH
ARDSWKLDLALPDGGQIELFSFPAAPASPSRPEAQGLRHLAFRVADLDSAVAHLNASGVA
HCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TEDIRIDEYTGRRFTFFADPDELPLELYEVG
ECCEEEECCCCCEEEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9723924; 9278503 [H]