| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047006
Identifier: 78047006
GI number: 78047006
Start: 1627897
End: 1629834
Strand: Reverse
Name: 78047006
Synonym: XCV1450
Alternate gene names: NA
Gene position: 1629834-1627897 (Counterclockwise)
Preceding gene: 78047007
Following gene: 78047001
Centisome position: 31.47
GC content: 65.43
Gene sequence:
>1938_bases ATGCCCCTCAGCTTTTCCCGCCTGCTGTCCCTGGCCATGGCCGCCCTCGTGAGCCTGTCGCTGGCGGCGCCGGCCGATGC GGCCAAGAAGAAGACCGCCAAGGCACAGACCACGCAAACGCGCGCGAAGGCGAGCAAAGGCAAGAAGACCGCCAAGCCGG CAGCCAAAAGCACCAAGGGCAAGGGCAGCAAGGCCGCCAGGGTCAGGCCCCGCGCGGTGGCCGCGCCGGTGGTGCTGACC AAGGCGCAGCAGCTCAACCTGCTGTACGACCAGTACTGGGACGCCTCGCTCAAGCTCAACCCGCTGCAGGCCACCTTCCA GGGCGAGAGCCGCTACAACGACCAGTTGCCGAACTTCCTGTCGCCGGCATTCCGCCAGCAATCGCACGATTTCACCGTAC TGTGGCTGGGCAAGGCCGAGGCGCTGGGGCCCGATGGGCTGAGTGGGCAGGACCTGCTCAGTTACCAGATCTTCGTGCGC GATGCGCGCAGCGCACTGGCCGCCGAGCAGTTTCCCAGCTGGATGCTGCCGATCAACCAGTTCTACAACATCGCCAGCAT TGCGGTGGTGCTGGGCTCGGGCACCGGCGCGCAGCCGTTCAAGACGGTCAAGGATTACGACAACTGGTCGCGGCGTGCGC TCGGCATTCCCGACCTGTTCGAGCAGGCCATCGCCAACATGCGTGCCGGCATGCAGGCCGGCGTGGTGCAGCCCAAGGTG CTGATGCAGAAGGTGCTGCCGCAGCTGGACGCGATCATCGCGCGCAATGCCGAAGACAGCCTGTTCTGGGGGCCGGTGCG CAACCTGCCCGCCGACATGCCCGAGGCCGACAAGCAGCGCATCACTGCAGAGTACAAGCGCATGATCGAAGTGCGCATCA TGCCGGCCTACCGCGCGTTGCGCGGCTTCATCGCCACCGAATACCTGCCCGCCTGCCGCGATAGCGATGGACTGGCGGCA TTGCCCAATGGCGCGGCGTGGTACGCCTATGACGTACGCCAGAGCACCACCACGGATTTGACCCCGGAACAGGTGCATCA GATCGGCCTGGATGAGGTCGCTCGCCTGCAGGGAGAAATCCAGGCAGTGGCCAAACAGGTCAAATTCCGCGGCAACCTGC CCAAGTTCTACAAGTTCATGCAGACCGACCGGCGCTTCGGCTTCCGCAGCGACACCGAGTTGCTGGGCACGTACCGCAGC CTGCAGGGCCGCGTGCAGCTGGCGGTGCCGCGGCTGTTCAACACCCAGGGCATGCCGGCGCTGGAAGTTCGTGCGGTGGA ACCGCAGCGTGCGCAATCGGCCGCCAGCGGCTCGTACATGCGCCCAAGCGGCGACGGCAGCACGCCGGGCATCTTCTACG TCAACACCTCGGACCTGCCTTCACGCAAGACCTGGGAGGCCGAGAGCCTGTACCTGCACGAAGCGGTGCCCGGCCACCAC TACCAGCTGGGGTTGCAGCAGCAGTTGACCGACCTGCCCAAGTTCCGCCGCCTGGGCGGTGAGACCGCCTACATCGAAGG CTGGGGCCTGTATGCCGAATCGCTTGGCCGCGAGCTAGGGCTGTATGACGACCCCTACAACTACTACGGCTATCTGCAGA ACGCCTTGTGGCGCTCGATTCGCCTGGTCACCGACACCGGCCTGCACAGCAAGGGCTGGACGCGTAGCCAGGCCATCGAC TACATGGTGGACAACTCCGCCATGAGCCGTGCCGATGCCGAAGCCGAGGTCGACCGCTACATGGCCATCCCCGGCCAGGC GCTGGCCTACAAGGTGGGCGAGATGAAGATTGCGCAATTGCGCGAGCAGGCGCAGCGCGAGCTGGGCCCACGCTTCGATG TCCGCGCCTTCCACACCGAAGTACTCAAGGACGGCTCGGTGCCGCTGGATATCTTGCAGGACAAGATCCAGCGCTGGATC GCCACGCAGAAGGGATAA
Upstream 100 bases:
>100_bases ATGCGCCGCATGAATTGCCGATAGGCGGTATGCCCCCAATGGGTGGCCGTAACCGTGCGGATCGGGCAAGCTCCCCGCTC GCTTGTTTCCGGAGCCGGTA
Downstream 100 bases:
>100_bases AGCGTACGGCTACGGTAGTTGGACGCTGCTGACCCGTTACTGCGGGTAGGCCTTCGATGCGCGCGCGTTCGCAGGTCGGG TCAGCCCAGCGCACGCGCCG
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MPLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKGKGSKAARVRPRAVAAPVVLT KAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFLSPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVR DARSALAAEQFPSWMLPINQFYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRALRGFIATEYLPACRDSDGLAA LPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEIQAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRS LQGRVQLAVPRLFNTQGMPALEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSIRLVTDTGLHSKGWTRSQAID YMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQLREQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWI ATQKG
Sequences:
>Translated_645_residues MPLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKGKGSKAARVRPRAVAAPVVLT KAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFLSPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVR DARSALAAEQFPSWMLPINQFYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRALRGFIATEYLPACRDSDGLAA LPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEIQAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRS LQGRVQLAVPRLFNTQGMPALEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSIRLVTDTGLHSKGWTRSQAID YMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQLREQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWI ATQKG >Mature_644_residues PLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKGKGSKAARVRPRAVAAPVVLTK AQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFLSPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVRD ARSALAAEQFPSWMLPINQFYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKVL MQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRALRGFIATEYLPACRDSDGLAAL PNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEIQAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRSL QGRVQLAVPRLFNTQGMPALEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHHY QLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSIRLVTDTGLHSKGWTRSQAIDY MVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQLREQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWIA TQKG
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71788; Mature: 71656
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKG CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC KGSKAARVRPRAVAAPVVLTKAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHCCCHHH SPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVRDARSALAAEQFPSWMLPINQ CHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV HHHHHHEEEEEECCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCHHCCCCCHHH LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRAL HHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHH RGFIATEYLPACRDSDGLAALPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEI HHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHH QAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRSLQGRVQLAVPRLFNTQGMPA HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEECHHHCCCCCCC LEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH EEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEECCCCCCC YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSI EEECHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RLVTDTGLHSKGWTRSQAIDYMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQL EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH REQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWIATQKG HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKG CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC KGSKAARVRPRAVAAPVVLTKAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHCCCHHH SPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVRDARSALAAEQFPSWMLPINQ CHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV HHHHHHEEEEEECCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCHHCCCCCHHH LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRAL HHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHH RGFIATEYLPACRDSDGLAALPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEI HHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHH QAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRSLQGRVQLAVPRLFNTQGMPA HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEECHHHCCCCCCC LEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH EEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEECCCCCCC YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSI EEECHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RLVTDTGLHSKGWTRSQAIDYMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQL EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH REQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWIATQKG HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA