Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78047006

Identifier: 78047006

GI number: 78047006

Start: 1627897

End: 1629834

Strand: Reverse

Name: 78047006

Synonym: XCV1450

Alternate gene names: NA

Gene position: 1629834-1627897 (Counterclockwise)

Preceding gene: 78047007

Following gene: 78047001

Centisome position: 31.47

GC content: 65.43

Gene sequence:

>1938_bases
ATGCCCCTCAGCTTTTCCCGCCTGCTGTCCCTGGCCATGGCCGCCCTCGTGAGCCTGTCGCTGGCGGCGCCGGCCGATGC
GGCCAAGAAGAAGACCGCCAAGGCACAGACCACGCAAACGCGCGCGAAGGCGAGCAAAGGCAAGAAGACCGCCAAGCCGG
CAGCCAAAAGCACCAAGGGCAAGGGCAGCAAGGCCGCCAGGGTCAGGCCCCGCGCGGTGGCCGCGCCGGTGGTGCTGACC
AAGGCGCAGCAGCTCAACCTGCTGTACGACCAGTACTGGGACGCCTCGCTCAAGCTCAACCCGCTGCAGGCCACCTTCCA
GGGCGAGAGCCGCTACAACGACCAGTTGCCGAACTTCCTGTCGCCGGCATTCCGCCAGCAATCGCACGATTTCACCGTAC
TGTGGCTGGGCAAGGCCGAGGCGCTGGGGCCCGATGGGCTGAGTGGGCAGGACCTGCTCAGTTACCAGATCTTCGTGCGC
GATGCGCGCAGCGCACTGGCCGCCGAGCAGTTTCCCAGCTGGATGCTGCCGATCAACCAGTTCTACAACATCGCCAGCAT
TGCGGTGGTGCTGGGCTCGGGCACCGGCGCGCAGCCGTTCAAGACGGTCAAGGATTACGACAACTGGTCGCGGCGTGCGC
TCGGCATTCCCGACCTGTTCGAGCAGGCCATCGCCAACATGCGTGCCGGCATGCAGGCCGGCGTGGTGCAGCCCAAGGTG
CTGATGCAGAAGGTGCTGCCGCAGCTGGACGCGATCATCGCGCGCAATGCCGAAGACAGCCTGTTCTGGGGGCCGGTGCG
CAACCTGCCCGCCGACATGCCCGAGGCCGACAAGCAGCGCATCACTGCAGAGTACAAGCGCATGATCGAAGTGCGCATCA
TGCCGGCCTACCGCGCGTTGCGCGGCTTCATCGCCACCGAATACCTGCCCGCCTGCCGCGATAGCGATGGACTGGCGGCA
TTGCCCAATGGCGCGGCGTGGTACGCCTATGACGTACGCCAGAGCACCACCACGGATTTGACCCCGGAACAGGTGCATCA
GATCGGCCTGGATGAGGTCGCTCGCCTGCAGGGAGAAATCCAGGCAGTGGCCAAACAGGTCAAATTCCGCGGCAACCTGC
CCAAGTTCTACAAGTTCATGCAGACCGACCGGCGCTTCGGCTTCCGCAGCGACACCGAGTTGCTGGGCACGTACCGCAGC
CTGCAGGGCCGCGTGCAGCTGGCGGTGCCGCGGCTGTTCAACACCCAGGGCATGCCGGCGCTGGAAGTTCGTGCGGTGGA
ACCGCAGCGTGCGCAATCGGCCGCCAGCGGCTCGTACATGCGCCCAAGCGGCGACGGCAGCACGCCGGGCATCTTCTACG
TCAACACCTCGGACCTGCCTTCACGCAAGACCTGGGAGGCCGAGAGCCTGTACCTGCACGAAGCGGTGCCCGGCCACCAC
TACCAGCTGGGGTTGCAGCAGCAGTTGACCGACCTGCCCAAGTTCCGCCGCCTGGGCGGTGAGACCGCCTACATCGAAGG
CTGGGGCCTGTATGCCGAATCGCTTGGCCGCGAGCTAGGGCTGTATGACGACCCCTACAACTACTACGGCTATCTGCAGA
ACGCCTTGTGGCGCTCGATTCGCCTGGTCACCGACACCGGCCTGCACAGCAAGGGCTGGACGCGTAGCCAGGCCATCGAC
TACATGGTGGACAACTCCGCCATGAGCCGTGCCGATGCCGAAGCCGAGGTCGACCGCTACATGGCCATCCCCGGCCAGGC
GCTGGCCTACAAGGTGGGCGAGATGAAGATTGCGCAATTGCGCGAGCAGGCGCAGCGCGAGCTGGGCCCACGCTTCGATG
TCCGCGCCTTCCACACCGAAGTACTCAAGGACGGCTCGGTGCCGCTGGATATCTTGCAGGACAAGATCCAGCGCTGGATC
GCCACGCAGAAGGGATAA

Upstream 100 bases:

>100_bases
ATGCGCCGCATGAATTGCCGATAGGCGGTATGCCCCCAATGGGTGGCCGTAACCGTGCGGATCGGGCAAGCTCCCCGCTC
GCTTGTTTCCGGAGCCGGTA

Downstream 100 bases:

>100_bases
AGCGTACGGCTACGGTAGTTGGACGCTGCTGACCCGTTACTGCGGGTAGGCCTTCGATGCGCGCGCGTTCGCAGGTCGGG
TCAGCCCAGCGCACGCGCCG

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MPLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKGKGSKAARVRPRAVAAPVVLT
KAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFLSPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVR
DARSALAAEQFPSWMLPINQFYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV
LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRALRGFIATEYLPACRDSDGLAA
LPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEIQAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRS
LQGRVQLAVPRLFNTQGMPALEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH
YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSIRLVTDTGLHSKGWTRSQAID
YMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQLREQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWI
ATQKG

Sequences:

>Translated_645_residues
MPLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKGKGSKAARVRPRAVAAPVVLT
KAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFLSPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVR
DARSALAAEQFPSWMLPINQFYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV
LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRALRGFIATEYLPACRDSDGLAA
LPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEIQAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRS
LQGRVQLAVPRLFNTQGMPALEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH
YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSIRLVTDTGLHSKGWTRSQAID
YMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQLREQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWI
ATQKG
>Mature_644_residues
PLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKGKGSKAARVRPRAVAAPVVLTK
AQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFLSPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVRD
ARSALAAEQFPSWMLPINQFYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKVL
MQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRALRGFIATEYLPACRDSDGLAAL
PNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEIQAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRSL
QGRVQLAVPRLFNTQGMPALEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHHY
QLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSIRLVTDTGLHSKGWTRSQAIDY
MVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQLREQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWIA
TQKG

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71788; Mature: 71656

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKG
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
KGSKAARVRPRAVAAPVVLTKAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHCCCHHH
SPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVRDARSALAAEQFPSWMLPINQ
CHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV
HHHHHHEEEEEECCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCHHCCCCCHHH
LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRAL
HHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHH
RGFIATEYLPACRDSDGLAALPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEI
HHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHH
QAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRSLQGRVQLAVPRLFNTQGMPA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEECHHHCCCCCCC
LEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH
EEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEECCCCCCC
YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSI
EEECHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
RLVTDTGLHSKGWTRSQAIDYMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQL
EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
REQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWIATQKG
HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLSFSRLLSLAMAALVSLSLAAPADAAKKKTAKAQTTQTRAKASKGKKTAKPAAKSTKG
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
KGSKAARVRPRAVAAPVVLTKAQQLNLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHCCCHHH
SPAFRQQSHDFTVLWLGKAEALGPDGLSGQDLLSYQIFVRDARSALAAEQFPSWMLPINQ
CHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FYNIASIAVVLGSGTGAQPFKTVKDYDNWSRRALGIPDLFEQAIANMRAGMQAGVVQPKV
HHHHHHEEEEEECCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCHHCCCCCHHH
LMQKVLPQLDAIIARNAEDSLFWGPVRNLPADMPEADKQRITAEYKRMIEVRIMPAYRAL
HHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHH
RGFIATEYLPACRDSDGLAALPNGAAWYAYDVRQSTTTDLTPEQVHQIGLDEVARLQGEI
HHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHH
QAVAKQVKFRGNLPKFYKFMQTDRRFGFRSDTELLGTYRSLQGRVQLAVPRLFNTQGMPA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEECHHHCCCCCCC
LEVRAVEPQRAQSAASGSYMRPSGDGSTPGIFYVNTSDLPSRKTWEAESLYLHEAVPGHH
EEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEECCCCCCC
YQLGLQQQLTDLPKFRRLGGETAYIEGWGLYAESLGRELGLYDDPYNYYGYLQNALWRSI
EEECHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
RLVTDTGLHSKGWTRSQAIDYMVDNSAMSRADAEAEVDRYMAIPGQALAYKVGEMKIAQL
EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
REQAQRELGPRFDVRAFHTEVLKDGSVPLDILQDKIQRWIATQKG
HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA