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The map label for this gene is yagS [H]

Identifier: 78046771

GI number: 78046771

Start: 1362568

End: 1363632

Strand: Reverse

Name: yagS [H]

Synonym: XCV1215

Alternate gene names: 78046771

Gene position: 1363632-1362568 (Counterclockwise)

Preceding gene: 78046772

Following gene: 78046770

Centisome position: 26.33

GC content: 65.73

Gene sequence:

>1065_bases
ATGATTCCGCTCACCTACACACGCCCGGACACCGTCGATGCGGCGCTTGGCGCCATTGCAGTGCGCAGCGGCGACACGCA
GCCGGTGCCCTCCGAGGCACCGGTACGCTTCATCGCCGGCGGCACCAATCTGACCGATTTGATGAAACTGCAGCTTATGC
GCCCCAGCAGTTTGATCGACATCAATCGGCTGCCGCTGGACAGCATCAGCACCCAACCCGACGGCGGCCTGCGCCTGGGT
GCGTTGGCGCGCAATGCCGACACTGCATATCACCCGGAGGTGGAAACGCGTTACCCCTTGCTGAGCGCGGCGATTCTGGC
CGGCGCTTCGCCGCAGATTCGCAACATGGCCAGCAATGGCGGCAACCTGCTGCAGCGCACGCGCTGCATGTATTTCTACG
ACCATGCCACCCCGTGCAACAAACGCGACCCGGGCACCGGCTGCTCGGCCATTGGCGGGCTGACCAAATACAACGCCATT
CTCGGCACCAGCGCGCATTGCATCGCCACGCATCCATCGGATATGTGCGTGGCATTGGCCGCGCTGGATGCCGTGGTGCA
CGTGCAGGGCGCCAATGGCGAGCGCGACATTCCGCTCGCGCAGTTCCACCGTCTGCCTGGCGATCACCCGGAACTGGATA
GCACCTTGGCGCCGGACGAATTGATCGTGCATATCGATCTGCCCGATGCGCAGCGCTTCGTTGCGCATAGTGCCTACCTC
AAGATCCGCGAGCGCCTCTCCTATGCGTTCGCGCTGGTGTCGGTGGCAGCGGCCCTGGATCTGGCCGACGACGGCAGCAT
TCGCGAAGTGCGTGTGGCACTGGGCGGCGTGGCCCACAAACCCTGGCGCAATGCCGATGCAGAGGCACCGCTGGTCGGCC
AGCCGGCCACTGCCGACACCTTCGGCCGCCTGGCCGATGCGCTGCTGCAGGGTGCGCAACCGCAGGGCGAGAATGCCTTC
AAGCTGCCGCTGGCACGCCGCGCCATCGTGCGCGCATTGAGCGTTGCGCGCGAGGGCACCATCGACAACCGCGGGCGCAC
CAGTGCGCTGGAGGAATCGCCATGA

Upstream 100 bases:

>100_bases
CCTATCCGCAGATCACCGATGCCGTGATGGAGGTGATGGGCAAGCCCAGCGACAGCAGCGACAGCGCGGCCACTCCGTGG
ACGCCCGGGACGGTGCCGGC

Downstream 100 bases:

>100_bases
ACGCACGCATCCCCGACCTGTCCGACAGCGCGCTGACCCCGCCGGTTGCCGACAGCGGCACCGGCTATCGCCCCACCGGC
ACCGGCGTCACGCGCATCGA

Product: putative xanthine dehydrogenase, FAD-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MIPLTYTRPDTVDAALGAIAVRSGDTQPVPSEAPVRFIAGGTNLTDLMKLQLMRPSSLIDINRLPLDSISTQPDGGLRLG
ALARNADTAYHPEVETRYPLLSAAILAGASPQIRNMASNGGNLLQRTRCMYFYDHATPCNKRDPGTGCSAIGGLTKYNAI
LGTSAHCIATHPSDMCVALAALDAVVHVQGANGERDIPLAQFHRLPGDHPELDSTLAPDELIVHIDLPDAQRFVAHSAYL
KIRERLSYAFALVSVAAALDLADDGSIREVRVALGGVAHKPWRNADAEAPLVGQPATADTFGRLADALLQGAQPQGENAF
KLPLARRAIVRALSVAREGTIDNRGRTSALEESP

Sequences:

>Translated_354_residues
MIPLTYTRPDTVDAALGAIAVRSGDTQPVPSEAPVRFIAGGTNLTDLMKLQLMRPSSLIDINRLPLDSISTQPDGGLRLG
ALARNADTAYHPEVETRYPLLSAAILAGASPQIRNMASNGGNLLQRTRCMYFYDHATPCNKRDPGTGCSAIGGLTKYNAI
LGTSAHCIATHPSDMCVALAALDAVVHVQGANGERDIPLAQFHRLPGDHPELDSTLAPDELIVHIDLPDAQRFVAHSAYL
KIRERLSYAFALVSVAAALDLADDGSIREVRVALGGVAHKPWRNADAEAPLVGQPATADTFGRLADALLQGAQPQGENAF
KLPLARRAIVRALSVAREGTIDNRGRTSALEESP
>Mature_354_residues
MIPLTYTRPDTVDAALGAIAVRSGDTQPVPSEAPVRFIAGGTNLTDLMKLQLMRPSSLIDINRLPLDSISTQPDGGLRLG
ALARNADTAYHPEVETRYPLLSAAILAGASPQIRNMASNGGNLLQRTRCMYFYDHATPCNKRDPGTGCSAIGGLTKYNAI
LGTSAHCIATHPSDMCVALAALDAVVHVQGANGERDIPLAQFHRLPGDHPELDSTLAPDELIVHIDLPDAQRFVAHSAYL
KIRERLSYAFALVSVAAALDLADDGSIREVRVALGGVAHKPWRNADAEAPLVGQPATADTFGRLADALLQGAQPQGENAF
KLPLARRAIVRALSVAREGTIDNRGRTSALEESP

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=339, Percent_Identity=50.7374631268437, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 37651; Mature: 37651

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLTYTRPDTVDAALGAIAVRSGDTQPVPSEAPVRFIAGGTNLTDLMKLQLMRPSSLID
CCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEE
INRLPLDSISTQPDGGLRLGALARNADTAYHPEVETRYPLLSAAILAGASPQIRNMASNG
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCC
GNLLQRTRCMYFYDHATPCNKRDPGTGCSAIGGLTKYNAILGTSAHCIATHPSDMCVALA
HHHHHHHHEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCEEEEECCHHHHHHHH
ALDAVVHVQGANGERDIPLAQFHRLPGDHPELDSTLAPDELIVHIDLPDAQRFVAHSAYL
HHHHHEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
KIRERLSYAFALVSVAAALDLADDGSIREVRVALGGVAHKPWRNADAEAPLVGQPATADT
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
FGRLADALLQGAQPQGENAFKLPLARRAIVRALSVAREGTIDNRGRTSALEESP
HHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPLTYTRPDTVDAALGAIAVRSGDTQPVPSEAPVRFIAGGTNLTDLMKLQLMRPSSLID
CCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEE
INRLPLDSISTQPDGGLRLGALARNADTAYHPEVETRYPLLSAAILAGASPQIRNMASNG
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCC
GNLLQRTRCMYFYDHATPCNKRDPGTGCSAIGGLTKYNAILGTSAHCIATHPSDMCVALA
HHHHHHHHEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCEEEEECCHHHHHHHH
ALDAVVHVQGANGERDIPLAQFHRLPGDHPELDSTLAPDELIVHIDLPDAQRFVAHSAYL
HHHHHEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
KIRERLSYAFALVSVAAALDLADDGSIREVRVALGGVAHKPWRNADAEAPLVGQPATADT
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
FGRLADALLQGAQPQGENAFKLPLARRAIVRALSVAREGTIDNRGRTSALEESP
HHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]