| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046761
Identifier: 78046761
GI number: 78046761
Start: 1348501
End: 1350852
Strand: Reverse
Name: 78046761
Synonym: XCV1205
Alternate gene names: NA
Gene position: 1350852-1348501 (Counterclockwise)
Preceding gene: 78046762
Following gene: 78046760
Centisome position: 26.09
GC content: 65.01
Gene sequence:
>2352_bases ATGCAGCTGTGCTACGGTCCGGCGCTGCATCCGCCTGGAGCAATCTGCATGTCGCCTCGCTTGATCGCCCCGCGTCGGGC CCGTTGGCTGGCAGTGCTTGCCGCTGTCGTCGCAGTTTTCGGCAACGCTGCGCCGCGCACGCCTGCAACTGCCTTCGACG CGGTAGACCCGTTCATCGGCACCGGCGGCGAAGGCCATACCTATCCTGGCGCCACGGTGCCATTCGGTATGGTGCAGCTG AGCCCGGATACGCAAATCAAGCCGCGCAAGGACGCCTACGGCTGGGCGGCCGGCTACCGGCACAGCGACACCACCATCGT CGGGTTCTCGCACACGCATTTTTCCGGTTCCGGGCATTCGGATCTGGGCGACATCCTGCTGATGCCGCAAGCTGGCGCCA TCAAGCTGGAACGCGGCGATGCCAGCAAGCCGGGCAGCGGCTATACCGCGCAGTTCGACCACACCAGCGAACAGGCGCAG CCCGGCTATTACGCAGTGACCCTGAAGGACCGAAACATCCGTGCCGAACTCACTGCCAGCGCGCGTGTGGGCGTGCACCG TTACCAGTTTCCGAAAAGCACGCCGGCGCATGTGCTGGTCGACCTGCGCACCAGCCTGTACGACTACCCCGGCAAGGTGC AGTGGTCGCGGCTGCGGGTGCGCAGCGATGGCACGGTGACCGGCTTTCGCGAGACACGCGGTTGGGCGCCCGGCCGGCAG CTGTATTTCGCCATGCGCTTCTCGCGCCCGCTCACTGCCACGCAACTCCACGACACCGAACAGGACATCCCCTACAAAGG GTTCCCACCGCCGGGCGAAAAGAATCCTGCGCAGCGCGCGCAGATCGAAGGCCGGCAACTGGTCGGCGTATTCGATGTCG CCAACGACGGCACGCCGCTGGTGGTGAAGGTAGCGCTCTCGCCGGTCAGCGAGGCCGGTGCCATCGCAAACCTCGATGCC GAAATGCCCGGCTTCGATTTCGATCGCGTACGCGCCGATGCACGCGCGCAATGGACGCAGGCGCTGTCGGCGATCGATGC ACAAGGCACCACGCAACAGCGCACCCAGCTCTACACCGCGCTGTATCACACCCTGCTGGGGCCAACGCTGTTCATGGACA GCGACGGCCGCTACCGCGGGCCAGACAATGCGGTGCATCAAGCAACTGGCTGGACCAACTATTCCACCTTCTCGCTGTGG GACACCTACCGCGCTCTGCATCCACTGCTCACCCTGGTGCAGCCGGCACAACGCAGCAGCGACGTGGTCAATTCGCTGCT CGCCTCGCGTCGCCAAAGCGCCTACGGCATCCTGCCGGTATGGGCATTCCACGGCCTGGAAACCTGGTGCATGATCGGCT ACCACGCCGTCCCGGTGATTGCCGACGCGTACATGAAAGGCATCGGCGGCTTCGACGCAGAGGAAGCCTTGCAGGCCATG GTCGCCAGCGCCAACTACGGCCCGTACGATGGAATTGCGCAATACCGTGAGCTGGGCTACGTGCCCATCGACGAAGAAGG CGAAGCCGCATCCAAGACGCTGGAATACGCCTTCGACGACTGGACCATCGCGCGCATGGCCGACAAGCTCGGCAAGCCCG CCATCGCCGCAGAATTCAGCCAGCGCGCCGGCAACTGGAAGCATGCCTTCGACCCGGCCACCGGCTACATGCGCGCGCGC ACCCGGGCCGGCACCTTCCGCGAGCCGTTCGACCCGTCTGCCAGTGGCTACGGTAGCGACTACACCGAAGGTAACGCGTG GCAATACTCCTGGTACGTGCCGCAGGACGTGGCCGGGCTGGCTGCCGCGCATGGCGGCGACGACACATTGCTTGCCCGGC TGGATGCGGTGTTCGATGCGAAGGTGGACCCGAAGATCTTCGAGCACATGGAAGACATCACCGGCCTGATCGGCTGGTAC GCGCACGGCAACGAGCCCAGCCACCACGTCGCCTATCTGTATGCATATGCCGGCCAACCGTGGCGCACGCAGGCGCGCCT GACCCAGATCATGCGCAGCCAGTATCACGCTGGACCGGAAGGCCTGGCCGGCAACGATGACCTCGGCCAGATGTCGGCCT GGTACGTGTTCACCACGCTGGGTTTCTACCCGGTGGCGCCCGGCAGCAACCAGTACATCATCGGCCGCCCGTTCCTGCCG CGCGCCACGCTCAACCTGCCCAATGGGAAGCGTTTCGCGGTGATTGCCGAGAGCCTGAGCGATGCACGCAGCTACATCGG TAGCGCCACGCTCAATGGCAAACCACTGACTCGCGCTTACGTTACGCACGAGGAAATCCAGGCCGGCGGTGAACTGCGTT TCCGGATGCAGGCGACACCGAATCAGCAGTGA
Upstream 100 bases:
>100_bases CGCAGTGTCCGCGTGGTACGTGCCGATTCCGGGCACCGGCCGCGCCCGCCTGGCGGCTACGCAATGGCTTTTGTTGGCGG CTCCAGGGTGTAGCGCGCCC
Downstream 100 bases:
>100_bases GCCACCGACCCAGCGCAGCGGCCGTATTCGATGTCGGCGCAGCTGCAATGATCCAACGCAATTGCAAGGTAGCGGCCGGA TGATACTGTAGCGATGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MQLCYGPALHPPGAICMSPRLIAPRRARWLAVLAAVVAVFGNAAPRTPATAFDAVDPFIGTGGEGHTYPGATVPFGMVQL SPDTQIKPRKDAYGWAAGYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGAIKLERGDASKPGSGYTAQFDHTSEQAQ PGYYAVTLKDRNIRAELTASARVGVHRYQFPKSTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQ LYFAMRFSRPLTATQLHDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIANLDA EMPGFDFDRVRADARAQWTQALSAIDAQGTTQQRTQLYTALYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLW DTYRALHPLLTLVQPAQRSSDVVNSLLASRRQSAYGILPVWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDAEEALQAM VASANYGPYDGIAQYRELGYVPIDEEGEAASKTLEYAFDDWTIARMADKLGKPAIAAEFSQRAGNWKHAFDPATGYMRAR TRAGTFREPFDPSASGYGSDYTEGNAWQYSWYVPQDVAGLAAAHGGDDTLLARLDAVFDAKVDPKIFEHMEDITGLIGWY AHGNEPSHHVAYLYAYAGQPWRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLP RATLNLPNGKRFAVIAESLSDARSYIGSATLNGKPLTRAYVTHEEIQAGGELRFRMQATPNQQ
Sequences:
>Translated_783_residues MQLCYGPALHPPGAICMSPRLIAPRRARWLAVLAAVVAVFGNAAPRTPATAFDAVDPFIGTGGEGHTYPGATVPFGMVQL SPDTQIKPRKDAYGWAAGYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGAIKLERGDASKPGSGYTAQFDHTSEQAQ PGYYAVTLKDRNIRAELTASARVGVHRYQFPKSTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQ LYFAMRFSRPLTATQLHDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIANLDA EMPGFDFDRVRADARAQWTQALSAIDAQGTTQQRTQLYTALYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLW DTYRALHPLLTLVQPAQRSSDVVNSLLASRRQSAYGILPVWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDAEEALQAM VASANYGPYDGIAQYRELGYVPIDEEGEAASKTLEYAFDDWTIARMADKLGKPAIAAEFSQRAGNWKHAFDPATGYMRAR TRAGTFREPFDPSASGYGSDYTEGNAWQYSWYVPQDVAGLAAAHGGDDTLLARLDAVFDAKVDPKIFEHMEDITGLIGWY AHGNEPSHHVAYLYAYAGQPWRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLP RATLNLPNGKRFAVIAESLSDARSYIGSATLNGKPLTRAYVTHEEIQAGGELRFRMQATPNQQ >Mature_783_residues MQLCYGPALHPPGAICMSPRLIAPRRARWLAVLAAVVAVFGNAAPRTPATAFDAVDPFIGTGGEGHTYPGATVPFGMVQL SPDTQIKPRKDAYGWAAGYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGAIKLERGDASKPGSGYTAQFDHTSEQAQ PGYYAVTLKDRNIRAELTASARVGVHRYQFPKSTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQ LYFAMRFSRPLTATQLHDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIANLDA EMPGFDFDRVRADARAQWTQALSAIDAQGTTQQRTQLYTALYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLW DTYRALHPLLTLVQPAQRSSDVVNSLLASRRQSAYGILPVWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDAEEALQAM VASANYGPYDGIAQYRELGYVPIDEEGEAASKTLEYAFDDWTIARMADKLGKPAIAAEFSQRAGNWKHAFDPATGYMRAR TRAGTFREPFDPSASGYGSDYTEGNAWQYSWYVPQDVAGLAAAHGGDDTLLARLDAVFDAKVDPKIFEHMEDITGLIGWY AHGNEPSHHVAYLYAYAGQPWRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLP RATLNLPNGKRFAVIAESLSDARSYIGSATLNGKPLTRAYVTHEEIQAGGELRFRMQATPNQQ
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85800; Mature: 85800
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLCYGPALHPPGAICMSPRLIAPRRARWLAVLAAVVAVFGNAAPRTPATAFDAVDPFIG CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC TGGEGHTYPGATVPFGMVQLSPDTQIKPRKDAYGWAAGYRHSDTTIVGFSHTHFSGSGHS CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC DLGDILLMPQAGAIKLERGDASKPGSGYTAQFDHTSEQAQPGYYAVTLKDRNIRAELTAS CCCCEEEECCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEEEEEC ARVGVHRYQFPKSTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQ HHCCCEEEECCCCCCCCEEEEEHHHHHCCCCCEEEEEEEEECCCCEECHHHHCCCCCCCE LYFAMRFSRPLTATQLHDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPL EEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCE VVKVALSPVSEAGAIANLDAEMPGFDFDRVRADARAQWTQALSAIDAQGTTQQRTQLYTA EEEEEECCCHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLWDTYRALHPLLTLVQPAQRSS HHHHHHCCEEEECCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH DVVNSLLASRRQSAYGILPVWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDAEEALQAM HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VASANYGPYDGIAQYRELGYVPIDEEGEAASKTLEYAFDDWTIARMADKLGKPAIAAEFS HHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH QRAGNWKHAFDPATGYMRARTRAGTFREPFDPSASGYGSDYTEGNAWQYSWYVPQDVAGL HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH AAAHGGDDTLLARLDAVFDAKVDPKIFEHMEDITGLIGWYAHGNEPSHHVAYLYAYAGQP HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEECCCC WRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLP CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEHCCCCEECCCCCCCEEEECCCCC RATLNLPNGKRFAVIAESLSDARSYIGSATLNGKPLTRAYVTHEEIQAGGELRFRMQATP CCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCEEEHEEHHHHHCCCCEEEEEECCC NQQ CCC >Mature Secondary Structure MQLCYGPALHPPGAICMSPRLIAPRRARWLAVLAAVVAVFGNAAPRTPATAFDAVDPFIG CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC TGGEGHTYPGATVPFGMVQLSPDTQIKPRKDAYGWAAGYRHSDTTIVGFSHTHFSGSGHS CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC DLGDILLMPQAGAIKLERGDASKPGSGYTAQFDHTSEQAQPGYYAVTLKDRNIRAELTAS CCCCEEEECCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEEEEEC ARVGVHRYQFPKSTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQ HHCCCEEEECCCCCCCCEEEEEHHHHHCCCCCEEEEEEEEECCCCEECHHHHCCCCCCCE LYFAMRFSRPLTATQLHDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPL EEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCE VVKVALSPVSEAGAIANLDAEMPGFDFDRVRADARAQWTQALSAIDAQGTTQQRTQLYTA EEEEEECCCHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLWDTYRALHPLLTLVQPAQRSS HHHHHHCCEEEECCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH DVVNSLLASRRQSAYGILPVWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDAEEALQAM HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VASANYGPYDGIAQYRELGYVPIDEEGEAASKTLEYAFDDWTIARMADKLGKPAIAAEFS HHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH QRAGNWKHAFDPATGYMRARTRAGTFREPFDPSASGYGSDYTEGNAWQYSWYVPQDVAGL HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH AAAHGGDDTLLARLDAVFDAKVDPKIFEHMEDITGLIGWYAHGNEPSHHVAYLYAYAGQP HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEECCCC WRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLP CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEHCCCCEECCCCCCCEEEECCCCC RATLNLPNGKRFAVIAESLSDARSYIGSATLNGKPLTRAYVTHEEIQAGGELRFRMQATP CCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCEEEHEEHHHHHCCCCEEEEEECCC NQQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA