| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yceF [C]
Identifier: 78046696
GI number: 78046696
Start: 1270545
End: 1270826
Strand: Reverse
Name: yceF [C]
Synonym: XCV1140
Alternate gene names: 78046696
Gene position: 1270826-1270545 (Counterclockwise)
Preceding gene: 78046711
Following gene: 78046693
Centisome position: 24.54
GC content: 68.44
Gene sequence:
>282_bases ATGATGCCACGCCTGATCCTCGCGTCCACCTCTGTCTATCGGCGTGAGCTGCTCGCCCGTCTGCAACTCGACTTCGACAC CGTCCGGCCGGAGGTCGACGAGCAGGCGCAGCCGGGCGAATCCCCGAGCGCACTGGCCAGCCGCCTGGCCGTGGAAAAAG CCGCCGCGGTGGCAGCCCGCTTCCCCGCCGCCTGGGTGATCGGCTCGGATCAGGTCGCCGACCTGGACGGCCAGCTGCTG GGCAAACCCGGTGTCGACTCCCCGCAATTCAATGCCAGCTAA
Upstream 100 bases:
>100_bases TGTTAAAGACCCGCGGCAGCCCTGTCAAATGACCCCATTCATGCGATTGCCGCATGGGCCGCAGGACGGCAGACTCCCGT GACCACCCCGGTAGCGCGCC
Downstream 100 bases:
>100_bases AACTAGAGGTCTGCGGTTGATGTTGATCACGGAACTCAGCGGGCGTTAGTCCGCCCAGGCTGTCGTGCGGGATCTGTTGG TTGTAGTCGGCAAGCCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MMPRLILASTSVYRRELLARLQLDFDTVRPEVDEQAQPGESPSALASRLAVEKAAAVAARFPAAWVIGSDQVADLDGQLL GKPGVDSPQFNAS
Sequences:
>Translated_93_residues MMPRLILASTSVYRRELLARLQLDFDTVRPEVDEQAQPGESPSALASRLAVEKAAAVAARFPAAWVIGSDQVADLDGQLL GKPGVDSPQFNAS >Mature_93_residues MMPRLILASTSVYRRELLARLQLDFDTVRPEVDEQAQPGESPSALASRLAVEKAAAVAARFPAAWVIGSDQVADLDGQLL GKPGVDSPQFNAS
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Escherichia coli, GI87081830, Length=82, Percent_Identity=56.0975609756098, Blast_Score=93, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 9949; Mature: 9949
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPRLILASTSVYRRELLARLQLDFDTVRPEVDEQAQPGESPSALASRLAVEKAAAVAAR CCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FPAAWVIGSDQVADLDGQLLGKPGVDSPQFNAS CCEEEEECCCCEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMPRLILASTSVYRRELLARLQLDFDTVRPEVDEQAQPGESPSALASRLAVEKAAAVAAR CCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FPAAWVIGSDQVADLDGQLLGKPGVDSPQFNAS CCEEEEECCCCEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]