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The map label for this gene is opsX [H]

Identifier: 78046658

GI number: 78046658

Start: 1236339

End: 1237181

Strand: Reverse

Name: opsX [H]

Synonym: XCV1102

Alternate gene names: 78046658

Gene position: 1237181-1236339 (Counterclockwise)

Preceding gene: 78046666

Following gene: 78046655

Centisome position: 23.89

GC content: 68.92

Gene sequence:

>843_bases
ATGCGCGCACTACGCCGGTCGCTGGCACCGCTGGGCCGCTTCGATGCCTTGCTGCAGATGCAGGTGGCCTTTCGGGCCAA
TGTGCTGTCGGCCTTCGTGCCGGCGCGGCGACGCATCGGCTACGACCGCAGCCGCTCCAAGGACCTGCACGGCCTGTTCG
TCAACGAGCGCATCGCCGATCGCCCCGGCATCCACGTGCTCGACGCCATCGGCAGCTTTGCCGAGCCGCTGGGCCTGCGC
CAGACCCAGGTGCGCTGGGACCTGCCGGTGCCCGACCAGGCGCATGCCTGGGCACGCGCGCAATGGGACGACGATGGCCG
CCCGGTACTGATGATCTCGCCCTGCTCCAGCCACCCGCGTCGCAACTGGTATCCCGATCGCCTCGCCGCGCTGGCCGATC
ATGCCGCCGCGCAGGGCTGGCGGATCGTGCTGTGCGGCGGCCGCAGCGACCTGGAACGCAGCACTGCCGATGCCATCGTT
GCGGCCGCACGCACGCCGGTGCTGGATCTGGTTGGCAAGGACACCCTCAAGCAACTGCCCGCACTGCTCGCGCGCGCGGA
CCTGGTGGTCACGCCGGATTCCGGGCCGATGCATATCGCCAACGCCATGGGCACCAAGGTGCTCGGCCTGCATGCGGCCA
GCAACCCGCGACGAAGCGGACCGTACTCGGACGTGCGCTATTGTGTGGACCGCTACGACGCCGCCGCGCGCAAATTCCTG
CACAAGCCAGCCGACCAGCTGCGCTGGGGAACGAAGATCGAATTCGACGAGGTGATGTCGCTGATCACCGTGGACGATGC
GATCGCCGCCTTCGAGCGTTATCGCGCCGACCACCCGCGCTGA

Upstream 100 bases:

>100_bases
CCAACTGCATTGGGTCATCGACAAGGCCGGGCTGAAATTGCTCGAGGGCCTGCCCGGCGTGCAATTCCACGTCTACGACA
AACACAGCGGGGTGGCCGGC

Downstream 100 bases:

>100_bases
CGATCGGCGATCAATCGCCGCCGGACCGCCACACGGTTGGCGCAAAAGGCGACGCAGCCAGCACTTCAGCACCGGCTCTG
AAGCTGCTCGGCGATTAGGC

Product: lipopolysaccharide core biosynthesis heptosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRALRRSLAPLGRFDALLQMQVAFRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIADRPGIHVLDAIGSFAEPLGLR
QTQVRWDLPVPDQAHAWARAQWDDDGRPVLMISPCSSHPRRNWYPDRLAALADHAAAQGWRIVLCGGRSDLERSTADAIV
AAARTPVLDLVGKDTLKQLPALLARADLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFL
HKPADQLRWGTKIEFDEVMSLITVDDAIAAFERYRADHPR

Sequences:

>Translated_280_residues
MRALRRSLAPLGRFDALLQMQVAFRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIADRPGIHVLDAIGSFAEPLGLR
QTQVRWDLPVPDQAHAWARAQWDDDGRPVLMISPCSSHPRRNWYPDRLAALADHAAAQGWRIVLCGGRSDLERSTADAIV
AAARTPVLDLVGKDTLKQLPALLARADLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFL
HKPADQLRWGTKIEFDEVMSLITVDDAIAAFERYRADHPR
>Mature_280_residues
MRALRRSLAPLGRFDALLQMQVAFRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIADRPGIHVLDAIGSFAEPLGLR
QTQVRWDLPVPDQAHAWARAQWDDDGRPVLMISPCSSHPRRNWYPDRLAALADHAAAQGWRIVLCGGRSDLERSTADAIV
AAARTPVLDLVGKDTLKQLPALLARADLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFL
HKPADQLRWGTKIEFDEVMSLITVDDAIAAFERYRADHPR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=274, Percent_Identity=24.0875912408759, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 31194; Mature: 31194

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALRRSLAPLGRFDALLQMQVAFRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIAD
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHCC
RPGIHVLDAIGSFAEPLGLRQTQVRWDLPVPDQAHAWARAQWDDDGRPVLMISPCSSHPR
CCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCC
RNWYPDRLAALADHAAAQGWRIVLCGGRSDLERSTADAIVAAARTPVLDLVGKDTLKQLP
CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHH
ALLARADLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFL
HHHHHCCEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HKPADQLRWGTKIEFDEVMSLITVDDAIAAFERYRADHPR
HCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRALRRSLAPLGRFDALLQMQVAFRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIAD
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHCC
RPGIHVLDAIGSFAEPLGLRQTQVRWDLPVPDQAHAWARAQWDDDGRPVLMISPCSSHPR
CCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCC
RNWYPDRLAALADHAAAQGWRIVLCGGRSDLERSTADAIVAAARTPVLDLVGKDTLKQLP
CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHH
ALLARADLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFL
HHHHHCCEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HKPADQLRWGTKIEFDEVMSLITVDDAIAAFERYRADHPR
HCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]