Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

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The map label for this gene is 78046592

Identifier: 78046592

GI number: 78046592

Start: 1163379

End: 1163840

Strand: Reverse

Name: 78046592

Synonym: XCV1036

Alternate gene names: NA

Gene position: 1163840-1163379 (Counterclockwise)

Preceding gene: 78046593

Following gene: 78046591

Centisome position: 22.47

GC content: 61.9

Gene sequence:

>462_bases
ATGAAACTTGTTTGGATACTCTGGCTGTCGCATGTGTTGCCGCAGCCAGCCGCAGATTCGCTGTGTTTGAGCACGACCGT
CTATCTGGAAGCGCGCGACCAGACCTTGCGTGGCCAACAGGCCGTTGCAGAAGTTGCGTTGCGTCGCCTGGATAGTGGTT
TGTGGGGCGATTCGATGTGTCAGGTGGTCACTGCACGCAAGCAGTTCGCGCCGACGATCGTCGCGCCAGGCACGCAGCTG
AAGAACGACGATGCCTGGAACAAGGCATTGGGCGTGGCACTGGCGGCGCAGCGCAACTGGGCATTGCCGGTTGGCCAACG
CAAGGAGATCGTGCCGGGCGCCAGCCACTTTGCCGCAAGCGCAATTGCGAGCCCCAGCTGGCGTAATGCCTATCAGGTGG
CCACCATCGGCGACCACACGTTCTATCGCGTGCAATCGCTGCGCCCGCGCAACGCGTCCTGA

Upstream 100 bases:

>100_bases
CGACCGGTGGCAGGTCGCCTCCCCATGACGCCAAGCCCTCTGCACTGGTGCATCCACATTGGATGCTCTGCGGACCGGCC
CATACGGAGCAAGGAGTTCT

Downstream 100 bases:

>100_bases
GCGCGGACTGTCGCGGTATCTCTGAGCGTCATACGTCGCTGGGATCGTTGATCATCGAGATGCAGTGCCGCTGCGTTTGA
CGTGTTTCAAGCGCCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Wall Hydrolase; Cell Wall Hydrolase Domain Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKLVWILWLSHVLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAPTIVAPGTQL
KNDDAWNKALGVALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS

Sequences:

>Translated_153_residues
MKLVWILWLSHVLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAPTIVAPGTQL
KNDDAWNKALGVALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS
>Mature_153_residues
MKLVWILWLSHVLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAPTIVAPGTQL
KNDDAWNKALGVALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS

Specific function: Unknown

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16778; Mature: 16778

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVWILWLSHVLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMC
CEEEHEEHHHHHCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
QVVTARKQFAPTIVAPGTQLKNDDAWNKALGVALAAQRNWALPVGQRKEIVPGASHFAAS
HHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
AIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS
HHCCCCCCCEEEEEEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKLVWILWLSHVLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMC
CEEEHEEHHHHHCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
QVVTARKQFAPTIVAPGTQLKNDDAWNKALGVALAAQRNWALPVGQRKEIVPGASHFAAS
HHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
AIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS
HHCCCCCCCEEEEEEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA