| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046483
Identifier: 78046483
GI number: 78046483
Start: 1056245
End: 1056526
Strand: Reverse
Name: 78046483
Synonym: XCV0927
Alternate gene names: NA
Gene position: 1056526-1056245 (Counterclockwise)
Preceding gene: 78046484
Following gene: 78046482
Centisome position: 20.4
GC content: 67.02
Gene sequence:
>282_bases TTGCAGGCTGTATCAGCCAGCGATGCCGCCATGTGCCTCCCGCGACCATGCTTACGCCCACCTGCAAATACCTTGCGCGG CGCGGTGTTTTCGCTGTCGATCGGCCTGGCGGCCTGCTCGCCGCAGCCGCCCGTCTCCAACGCGGCGACTCCGGCCGAGG TGTTCTGTACGCTGCTTCCGGGTCGGCCGGATGACGATCTGCCCAGCGATCGCCGCGACGAAAGCATGCAGCAACTGGAC CTTGCCACGCGCTGCCACCGGTCACTGCGCAGACGGCGTTGA
Upstream 100 bases:
>100_bases CTGGCCGCCATCGCCTGCCTGCTGGTCGGCGTGCTGTGGTGCGCAGCACTGCATGCGGAAGCGAAATGACCCCGGTACCT GATGCACGCAGCGGCCTAGA
Downstream 100 bases:
>100_bases CTTCACCAAGAGCAGCTGACAACACCTAGCGGGCAGTCGTCAGGCGGATACGACGGCGCGGAGCAACCGGAGTGGACGCG TGGTACATGCCGATTCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MQAVSASDAAMCLPRPCLRPPANTLRGAVFSLSIGLAACSPQPPVSNAATPAEVFCTLLPGRPDDDLPSDRRDESMQQLD LATRCHRSLRRRR
Sequences:
>Translated_93_residues MQAVSASDAAMCLPRPCLRPPANTLRGAVFSLSIGLAACSPQPPVSNAATPAEVFCTLLPGRPDDDLPSDRRDESMQQLD LATRCHRSLRRRR >Mature_93_residues MQAVSASDAAMCLPRPCLRPPANTLRGAVFSLSIGLAACSPQPPVSNAATPAEVFCTLLPGRPDDDLPSDRRDESMQQLD LATRCHRSLRRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10073; Mature: 10073
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAVSASDAAMCLPRPCLRPPANTLRGAVFSLSIGLAACSPQPPVSNAATPAEVFCTLLP CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC GRPDDDLPSDRRDESMQQLDLATRCHRSLRRRR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQAVSASDAAMCLPRPCLRPPANTLRGAVFSLSIGLAACSPQPPVSNAATPAEVFCTLLP CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC GRPDDDLPSDRRDESMQQLDLATRCHRSLRRRR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA