Click here to switch to the map view.

The map label for this gene is ytfF [H]

Identifier: 78046484

GI number: 78046484

Start: 1056558

End: 1057487

Strand: Reverse

Name: ytfF [H]

Synonym: XCV0928

Alternate gene names: 78046484

Gene position: 1057487-1056558 (Counterclockwise)

Preceding gene: 78046485

Following gene: 78046483

Centisome position: 20.42

GC content: 67.2

Gene sequence:

>930_bases
ATGCGTGAACGCTTGATGGTGGGTGTCGCCTGCGGAATCGGTGCGGGCGCGCTGTGGGGGCTGGTGTTTCTGGCGCCGCA
ATTGCTGGGCGCTTTTACGCCGCTGCAATTGGCGGTGGCGCGGTATCTCTCGTATGGCGCCGTGGCGACCTTGCTGCTGG
CGCCACGCGCGCGGCAGACCGCTGCCCGGCTGGGCGCTGCCGAATGGTGGGCGTTGGTGCGCTTGAGCCTGATGGGAAAC
CTGATGTATTACGTGCTGCTTGGCAGCGCCGTGCAGTGGGCAGGCAGCGCGGCAACGGCGTTGATCATCGGGCTGTTGCC
GGTGGTGGTCACCGTGATCGGGACGCGTGCCGCCGGTGCGGTGCAATTGCGACGTCTGGCCGCGCCCTGCGTTTTGTGCG
TGATCGGCGTGACATTGGTGGCAGTGGATACCGTGCAGGACGACTCCGGCCAGCAGGCAAGCGATCGCCTGACCCGGATC
GCCGGCCTGCTGTGCGCGGCGGGTGCGCTGGTGTCGTGGTCGGCCTATTCGATCGCAAATGCACGCTGGTTGCTGCGGCG
CCCGGATCTGTCCGGCGGCGACTGGTCGCTGCTGACCGGCGTGGTCACCGGCGCACTGGCGTTGTTGCTGGCGCCGGCGG
CCCTGATCGGCAGTGCCGCGCATGCACCGCTCGAGTGGGCCAGTTTCTGGGGCGTGTCGCTGTTGCTGGGCATCCTGGCC
TCGATCATCGGCAATGCGCTGTGGAATCGTGCCAGCCGCGTGCTACCGCTGACCCTGGTCGGGCAGATGATCGTATTCGA
GACGGTGTTTGCGCTGCTGTACGGCTTCGCCTGGGAAATGCGCCTGCCCACGCCATTGGAGCTGGCCGCCATCGCCTGCC
TGCTGGTCGGCGTGCTGTGGTGCGCAGCACTGCATGCGGAAGCGAAATGA

Upstream 100 bases:

>100_bases
CACTGATGCAGCGTGCGGCGTTGCATCCGTCTGCAGGGCCCGCCTTGATCAACGCCCTGCCGCACGGCACGCTGCAATGC
ATGCCCTGAGGAACAGCACG

Downstream 100 bases:

>100_bases
CCCCGGTACCTGATGCACGCAGCGGCCTAGATTGCAGGCTGTATCAGCCAGCGATGCCGCCATGTGCCTCCCGCGACCAT
GCTTACGCCCACCTGCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGAVATLLLAPRARQTAARLGAAEWWALVRLSLMGN
LMYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGAVQLRRLAAPCVLCVIGVTLVAVDTVQDDSGQQASDRLTRI
AGLLCAAGALVSWSAYSIANARWLLRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLWCAALHAEAK

Sequences:

>Translated_309_residues
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGAVATLLLAPRARQTAARLGAAEWWALVRLSLMGN
LMYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGAVQLRRLAAPCVLCVIGVTLVAVDTVQDDSGQQASDRLTRI
AGLLCAAGALVSWSAYSIANARWLLRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLWCAALHAEAK
>Mature_309_residues
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGAVATLLLAPRARQTAARLGAAEWWALVRLSLMGN
LMYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGAVQLRRLAAPCVLCVIGVTLVAVDTVQDDSGQQASDRLTRI
AGLLCAAGALVSWSAYSIANARWLLRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLWCAALHAEAK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=307, Percent_Identity=31.9218241042345, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32360; Mature: 32360

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGAVATLLLAPRARQT
CCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
AARLGAAEWWALVRLSLMGNLMYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH
VQLRRLAAPCVLCVIGVTLVAVDTVQDDSGQQASDRLTRIAGLLCAAGALVSWSAYSIAN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ARWLLRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
CHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLW
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
CAALHAEAK
HHHHHHCCC
>Mature Secondary Structure
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGAVATLLLAPRARQT
CCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
AARLGAAEWWALVRLSLMGNLMYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH
VQLRRLAAPCVLCVIGVTLVAVDTVQDDSGQQASDRLTRIAGLLCAAGALVSWSAYSIAN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ARWLLRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
CHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLW
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
CAALHAEAK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]