| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is gnl [H]
Identifier: 78046478
GI number: 78046478
Start: 1051232
End: 1052137
Strand: Reverse
Name: gnl [H]
Synonym: XCV0922
Alternate gene names: 78046478
Gene position: 1052137-1051232 (Counterclockwise)
Preceding gene: 78046480
Following gene: 78046477
Centisome position: 20.32
GC content: 65.34
Gene sequence:
>906_bases ATGACCGTCGTTGCCCATCTTCGCTATCTGCCGCTGGCGCTCCTGTTGTCCAGTTCGCTCGCCAGCGCTGCCGACACTCC CTTCGTTGCGCGCGATCTGATCGGCGATGGCGCATTCACACACAATGCCGAAGGCCCGGCGACCGGTCCGGATGGCGCGC TGTACGCGGTGAACCTGGGCAAGGACGGCACCATCGCGCGCATCGCGCTGCAGGCCGACGGCGGCGCACGTGCCGAGGTG TTTGTCACCTTGCCCGAGGGAAGCACCGGCAATGGCATCCGCTTTCGCGACGGCACCATGTATGTCGCCGATTACACCGG CCACAAGATCCTGCAGGTCAACATGCAGACGCGTGCGGTCAGCACGTTCGCGGCATTGCCCGAGGCAGATGGCCCCAACG ATCTGGCGCTGGCGCCCGATGGCAGCTTCTACGCCAGCGACCCGAACTGGAAGGACAATGGCGGGCGCTTGTGGCACATC GGCCGCGACGGCGCGGTGCGGCTGCTGGAGGCAGGGATGACCACGCCCAACGGCCTGGATGTCAGCCCCGACGGCAAACA GCTGTATGTCAATGAAAGCATGTCGCGCAAGGTGTGGGCCTACGACCGTGGCAGCGACGGCAGCCTGCGCAACAAACGGC TGCTGATCAGCTTCCCCGATTTCGGCATGGACGGCATGCGCTGCGATGCCGACGGCAATCTGTACATCGCCCGCTACGAT GCCGGGCAGATTGCAGTGGTGTCGCCGCAGGGCAAGCTGCTGCGCACGGTTGCATTGAAGGGGCGCAAGGCCAGCAACGT GGCCTTCGGCGGCGCCGATGGCAAGCAGGTGTTCGTCACCTTGCAGGACCGCGGCGCAGTTGAAACGTTCAGGTCCGATC GTCGCGGGCGCGAAACCGGACACTGA
Upstream 100 bases:
>100_bases GCGTACTGCTCGCGCACCTTACTTGATCGGGTGTGATCACCGCCATGGTCGCGCTGCACGTTCTGGCACACTGCTGGCGA TCACATCCGGAGCATTGCGC
Downstream 100 bases:
>100_bases AACTGGCGTGTGCGTCGCATTGGTTCTCAGGCCGCGCAACAGCGTCCTGGCATGCTGCAGGTCACCTGTGGAGGACTCCC CATGCAACCGATCGAATTGA
Product: putative secreted protein
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTVVAHLRYLPLALLLSSSLASAADTPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGGARAEV FVTLPEGSTGNGIRFRDGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDLALAPDGSFYASDPNWKDNGGRLWHI GRDGAVRLLEAGMTTPNGLDVSPDGKQLYVNESMSRKVWAYDRGSDGSLRNKRLLISFPDFGMDGMRCDADGNLYIARYD AGQIAVVSPQGKLLRTVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH
Sequences:
>Translated_301_residues MTVVAHLRYLPLALLLSSSLASAADTPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGGARAEV FVTLPEGSTGNGIRFRDGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDLALAPDGSFYASDPNWKDNGGRLWHI GRDGAVRLLEAGMTTPNGLDVSPDGKQLYVNESMSRKVWAYDRGSDGSLRNKRLLISFPDFGMDGMRCDADGNLYIARYD AGQIAVVSPQGKLLRTVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH >Mature_300_residues TVVAHLRYLPLALLLSSSLASAADTPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGGARAEVF VTLPEGSTGNGIRFRDGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDLALAPDGSFYASDPNWKDNGGRLWHIG RDGAVRLLEAGMTTPNGLDVSPDGKQLYVNESMSRKVWAYDRGSDGSLRNKRLLISFPDFGMDGMRCDADGNLYIARYDA GQIAVVSPQGKLLRTVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 32079; Mature: 31948
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVAHLRYLPLALLLSSSLASAADTPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLG CEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEC KDGTIARIALQADGGARAEVFVTLPEGSTGNGIRFRDGTMYVADYTGHKILQVNMQTRAV CCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCEEEEEECCCCEEEEEEEHHHEE STFAALPEADGPNDLALAPDGSFYASDPNWKDNGGRLWHIGRDGAVRLLEAGMTTPNGLD EHHHHCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCE VSPDGKQLYVNESMSRKVWAYDRGSDGSLRNKRLLISFPDFGMDGMRCDADGNLYIARYD ECCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEEEC AGQIAVVSPQGKLLRTVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETG CCCEEEECCCCCEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCC H C >Mature Secondary Structure TVVAHLRYLPLALLLSSSLASAADTPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLG EEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEC KDGTIARIALQADGGARAEVFVTLPEGSTGNGIRFRDGTMYVADYTGHKILQVNMQTRAV CCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCEEEEEECCCCEEEEEEEHHHEE STFAALPEADGPNDLALAPDGSFYASDPNWKDNGGRLWHIGRDGAVRLLEAGMTTPNGLD EHHHHCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCE VSPDGKQLYVNESMSRKVWAYDRGSDGSLRNKRLLISFPDFGMDGMRCDADGNLYIARYD ECCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEEEC AGQIAVVSPQGKLLRTVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETG CCCEEEECCCCCEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]