Click here to switch to the map view.

The map label for this gene is yeiJ [C]

Identifier: 78046427

GI number: 78046427

Start: 1001862

End: 1003160

Strand: Reverse

Name: yeiJ [C]

Synonym: XCV0871

Alternate gene names: 78046427

Gene position: 1003160-1001862 (Counterclockwise)

Preceding gene: 78046428

Following gene: 78046426

Centisome position: 19.37

GC content: 64.36

Gene sequence:

>1299_bases
ATGGTCGAAGGTTTGGGAAGGATCGGTTTCGGCCTGTTCGGTCTGGCGGTGCTCATCGGCATCACCTGGCTGTTTTCGAG
CAACCGCCGCGCGATCGACTGGAAGCTGGTCGCCACCGGTCTGGCCCTGCAGATCTCGTTCGCCGCACTGGTGTTGCTGG
TGCCGGGCGGGCGCGACGTGTTCGACGCGCTGGGCAAGGGCTTCGTCAAGGTGCTGAGTTTCGTCAATGAAGGGTCCACC
TTCATTTTCGGCAACCTGATGAACATCGACAGCTACGGCTTCATCTTTGCGTTCCAGGTGCTGCCCACCATCATCTTCTT
CTCGGCGCTGATGGGCGTGCTTTATCACCTGGGCGTGATGCAGATGGTGGTGCGTGCGATGGCGTGGGCGATCACCAAGG
TGATGCGCGTTTCCGGTGCGGAAACCACCAGCGTGTGCGCCAGCGTCTTCATCGGCCAGACCGAAGCGCCGCTGACCGTG
CGCCCGTATATCCCCAAGATGACCCAGTCCGAGCTGCTGACGATGATGATCGGCGGCATGGCGCATATCGCCGGTGGCGT
GCTGGCTGCATATGTCGGCATGCTCGGCGGCAGCGATCCGGCGCAACAGGCGTTCTATGCCAAGCACTTGCTGGCCGCCA
GCATCATGGCCGCGCCCGCCACGCTGGTGGTCGCCAAGCTGCTGGTGCCGGAAACCGGCACCCCGCTGACCCGCGGCACC
GTCAAGATGGAAGTGGAAAAAACCACCAGCAATGTCATCGATGCGGCCGCGGCCGGTGCCGGCGACGGCCTGCGCCTGGC
GCTGAATATCGGCGCGATGCTGCTGGCCTTCATCGCGCTGATCGCGCTGATCAACGCACCGCTGACCTGGCTGGGCGAGG
TCACCGGCGCCGCCGCGCTGCTGGGCCGCCCGACCAACCTGTCGACGATCTTCGGCTACGTGCTGGCGCCGATCGCCTGG
GTGATCGGTACCCCGTGGGTGGATGCGACCACGGTCGGGTCGTTGATCGGCCAGAAGGTGGTGATCAACGAGTTCGTCGC
TTACAGCGAGTTGTCGCGCATCGTCAAGGGCGAAGTGCCGGGCGTAGGCCTGAGCGCAGAAGGTCGCCTGATCGCCACCT
ACGCGCTGTGCGGCTTCGCCAATTTCAGCTCGATCGCGATCCAGATCGGCGGGATCGGCGGGCTGGCGCCGGAACGTCGT
CACGATCTGGCCAAGTTCGGCCTGCGTGCGGTGCTCGGCGGTTCGATCGCTACCTTCATGACCGCTACCATTGCCGGGGT
GCTGTCGCATTTCGGTTGA

Upstream 100 bases:

>100_bases
TCTGTGGGCCGACCGAGGCCATCTGAATGCCCCTCGCCTTGCCCCCTGTCACCCCCTGCTCTAGGCTTCCCGTTTTGCCG
TCAGCAGCCCGGGGATTGGA

Downstream 100 bases:

>100_bases
GGCGGTGCGGGTTCATCGGCGTGACGGTCTAATCACTGCGCGCCGCGTTTCATCCAGTCTTTCAAGTCAGTCATTCAAGG
CAAGGTATTTATGAGTTCGG

Product: nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MVEGLGRIGFGLFGLAVLIGITWLFSSNRRAIDWKLVATGLALQISFAALVLLVPGGRDVFDALGKGFVKVLSFVNEGST
FIFGNLMNIDSYGFIFAFQVLPTIIFFSALMGVLYHLGVMQMVVRAMAWAITKVMRVSGAETTSVCASVFIGQTEAPLTV
RPYIPKMTQSELLTMMIGGMAHIAGGVLAAYVGMLGGSDPAQQAFYAKHLLAASIMAAPATLVVAKLLVPETGTPLTRGT
VKMEVEKTTSNVIDAAAAGAGDGLRLALNIGAMLLAFIALIALINAPLTWLGEVTGAAALLGRPTNLSTIFGYVLAPIAW
VIGTPWVDATTVGSLIGQKVVINEFVAYSELSRIVKGEVPGVGLSAEGRLIATYALCGFANFSSIAIQIGGIGGLAPERR
HDLAKFGLRAVLGGSIATFMTATIAGVLSHFG

Sequences:

>Translated_432_residues
MVEGLGRIGFGLFGLAVLIGITWLFSSNRRAIDWKLVATGLALQISFAALVLLVPGGRDVFDALGKGFVKVLSFVNEGST
FIFGNLMNIDSYGFIFAFQVLPTIIFFSALMGVLYHLGVMQMVVRAMAWAITKVMRVSGAETTSVCASVFIGQTEAPLTV
RPYIPKMTQSELLTMMIGGMAHIAGGVLAAYVGMLGGSDPAQQAFYAKHLLAASIMAAPATLVVAKLLVPETGTPLTRGT
VKMEVEKTTSNVIDAAAAGAGDGLRLALNIGAMLLAFIALIALINAPLTWLGEVTGAAALLGRPTNLSTIFGYVLAPIAW
VIGTPWVDATTVGSLIGQKVVINEFVAYSELSRIVKGEVPGVGLSAEGRLIATYALCGFANFSSIAIQIGGIGGLAPERR
HDLAKFGLRAVLGGSIATFMTATIAGVLSHFG
>Mature_432_residues
MVEGLGRIGFGLFGLAVLIGITWLFSSNRRAIDWKLVATGLALQISFAALVLLVPGGRDVFDALGKGFVKVLSFVNEGST
FIFGNLMNIDSYGFIFAFQVLPTIIFFSALMGVLYHLGVMQMVVRAMAWAITKVMRVSGAETTSVCASVFIGQTEAPLTV
RPYIPKMTQSELLTMMIGGMAHIAGGVLAAYVGMLGGSDPAQQAFYAKHLLAASIMAAPATLVVAKLLVPETGTPLTRGT
VKMEVEKTTSNVIDAAAAGAGDGLRLALNIGAMLLAFIALIALINAPLTWLGEVTGAAALLGRPTNLSTIFGYVLAPIAW
VIGTPWVDATTVGSLIGQKVVINEFVAYSELSRIVKGEVPGVGLSAEGRLIATYALCGFANFSSIAIQIGGIGGLAPERR
HDLAKFGLRAVLGGSIATFMTATIAGVLSHFG

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI42542381, Length=425, Percent_Identity=38.1176470588235, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI227116277, Length=425, Percent_Identity=37.4117647058824, Blast_Score=276, Evalue=2e-74,
Organism=Homo sapiens, GI11545853, Length=432, Percent_Identity=38.6574074074074, Blast_Score=270, Evalue=2e-72,
Organism=Escherichia coli, GI1788485, Length=421, Percent_Identity=37.5296912114014, Blast_Score=267, Evalue=8e-73,
Organism=Escherichia coli, GI1788488, Length=420, Percent_Identity=39.2857142857143, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI1788737, Length=424, Percent_Identity=30.8962264150943, Blast_Score=180, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17560276, Length=409, Percent_Identity=34.4743276283619, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI71991794, Length=432, Percent_Identity=32.6388888888889, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI25146537, Length=229, Percent_Identity=31.8777292576419, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI45552517, Length=407, Percent_Identity=36.3636363636364, Blast_Score=271, Evalue=5e-73,
Organism=Drosophila melanogaster, GI19921868, Length=407, Percent_Identity=36.3636363636364, Blast_Score=271, Evalue=5e-73,
Organism=Drosophila melanogaster, GI45552519, Length=407, Percent_Identity=36.3636363636364, Blast_Score=271, Evalue=7e-73,
Organism=Drosophila melanogaster, GI281360430, Length=425, Percent_Identity=35.2941176470588, Blast_Score=230, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 45090; Mature: 45090

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEGLGRIGFGLFGLAVLIGITWLFSSNRRAIDWKLVATGLALQISFAALVLLVPGGRDV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHEEECCCCHHH
FDALGKGFVKVLSFVNEGSTFIFGNLMNIDSYGFIFAFQVLPTIIFFSALMGVLYHLGVM
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMVVRAMAWAITKVMRVSGAETTSVCASVFIGQTEAPLTVRPYIPKMTQSELLTMMIGGM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHH
AHIAGGVLAAYVGMLGGSDPAQQAFYAKHLLAASIMAAPATLVVAKLLVPETGTPLTRGT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
VKMEVEKTTSNVIDAAAAGAGDGLRLALNIGAMLLAFIALIALINAPLTWLGEVTGAAAL
EEEEEEHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LGRPTNLSTIFGYVLAPIAWVIGTPWVDATTVGSLIGQKVVINEFVAYSELSRIVKGEVP
HCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVGLSAEGRLIATYALCGFANFSSIAIQIGGIGGLAPERRHDLAKFGLRAVLGGSIATFM
CCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
TATIAGVLSHFG
HHHHHHHHHHCC
>Mature Secondary Structure
MVEGLGRIGFGLFGLAVLIGITWLFSSNRRAIDWKLVATGLALQISFAALVLLVPGGRDV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHEEECCCCHHH
FDALGKGFVKVLSFVNEGSTFIFGNLMNIDSYGFIFAFQVLPTIIFFSALMGVLYHLGVM
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMVVRAMAWAITKVMRVSGAETTSVCASVFIGQTEAPLTVRPYIPKMTQSELLTMMIGGM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHH
AHIAGGVLAAYVGMLGGSDPAQQAFYAKHLLAASIMAAPATLVVAKLLVPETGTPLTRGT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
VKMEVEKTTSNVIDAAAAGAGDGLRLALNIGAMLLAFIALIALINAPLTWLGEVTGAAAL
EEEEEEHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LGRPTNLSTIFGYVLAPIAWVIGTPWVDATTVGSLIGQKVVINEFVAYSELSRIVKGEVP
HCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVGLSAEGRLIATYALCGFANFSSIAIQIGGIGGLAPERRHDLAKFGLRAVLGGSIATFM
CCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
TATIAGVLSHFG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]