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The map label for this gene is cc4 [H]

Identifier: 78046336

GI number: 78046336

Start: 892451

End: 893248

Strand: Reverse

Name: cc4 [H]

Synonym: XCV0780

Alternate gene names: 78046336

Gene position: 893248-892451 (Counterclockwise)

Preceding gene: 78046339

Following gene: 78046335

Centisome position: 17.25

GC content: 68.67

Gene sequence:

>798_bases
ATGCGCCATGCTCGTGTGCTAGTCCTCGCCGCACTCGCCGTACCGGTCATTGCGGCCGTGGCGTTTGCGCAATCGGCAGT
CACGCCGATCCCCGATCCGCCGCCGGTACGCGTTGCGCCGCTGGAGGTGGACCTGGCCAAGACCACCTGGGGAGATGCCA
AGGCCGGCCAGACCAAGGCTGCTGCCTGCGCAGCCTGCCATGGACCGGACGGCAATCCGGCAGTGGCGATGTACCCGCGC
ATTGCCGGGCAAACCGAGCGCTACGTGGCGCATCAGGTGGCGTTGATTGCCAGCGGCGAACGTAATACCGGGATGTCGGC
GGTGATGGTGCCCTTCGTCAAGGATCTCACCGCGCAGGACATGCGCGACCTGGGCGCCTACTTCGCCACCCAGAAGGCCT
CCGCCGGTGTCGCCGACGACGCGGCGATCGCCGAGGGCCCCTACCAGGGCATGAAGTTCTACGAGGTCGGCGAGAAGCTC
TACCGCGGCGGCGACATCGCCCGCGGCGTGCCGGCCTGCATGGCCTGCCACGGGCCATCGGGCGGCGGCAATCCGGGCCC
GGCCTATCCGCGCCTGGGCGGACAGCATGCCGAGTACGTGGCGCGGCGCCTGAAGGAATACCAGGCCGGCACCACCCAGG
AGCGCAATCCGGCGCTGTTCAATATCATGGCGCAAGTGGCGCATCCGCTGACCGAGCAGGAGATCCAGGCGCTGGCCAGC
TATCTGCAAGGCCTGCATGATCGTGCCGACGACGCGGCAGCGGCGCAGCCACCTGCAGGAGCGCCTGCACGTTCGTGA

Upstream 100 bases:

>100_bases
GTTCGTTGACCCTGGCGCAAAGGCGTGTCGATAATCGAAGCACGCCTGCCACTGCCAGTACCCAACGCGCGCGGGCCGGG
TCCATACGGAGCTTTAGCTG

Downstream 100 bases:

>100_bases
TCTGATTCCTGCCGTCGCCACGCCGCTTCACGACGCCGGTCCCGCGACCGGCGTCGTCGTTTACCGCTCTCCCCTCGCCC
CCACGGAGCCCGCATGAAAT

Product: putative cytochrome C precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRHARVLVLAALAVPVIAAVAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYPR
IAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKL
YRGGDIARGVPACMACHGPSGGGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALAS
YLQGLHDRADDAAAAQPPAGAPARS

Sequences:

>Translated_265_residues
MRHARVLVLAALAVPVIAAVAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYPR
IAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKL
YRGGDIARGVPACMACHGPSGGGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALAS
YLQGLHDRADDAAAAQPPAGAPARS
>Mature_265_residues
MRHARVLVLAALAVPVIAAVAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYPR
IAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKL
YRGGDIARGVPACMACHGPSGGGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALAS
YLQGLHDRADDAAAAQPPAGAPARS

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 27593; Mature: 27593

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHARVLVLAALAVPVIAAVAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEEEECCCCCCCCCCCCHHH
AACAACHGPDGNPAVAMYPRIAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQD
HHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH
MRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKLYRGGDIARGVPACMACHGPS
HHHHHHHHHHHHCCCCCCCCHHHCCCCHHCCHHHHHHHHHHCCCCHHCCCHHHHEECCCC
GGGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
YLQGLHDRADDAAAAQPPAGAPARS
HHHHHHHHCCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MRHARVLVLAALAVPVIAAVAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEEEECCCCCCCCCCCCHHH
AACAACHGPDGNPAVAMYPRIAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQD
HHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH
MRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKLYRGGDIARGVPACMACHGPS
HHHHHHHHHHHHCCCCCCCCHHHCCCCHHCCHHHHHHHHHHCCCCHHCCCHHHHEECCCC
GGGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
YLQGLHDRADDAAAAQPPAGAPARS
HHHHHHHHCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]