| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046188
Identifier: 78046188
GI number: 78046188
Start: 712084
End: 713619
Strand: Reverse
Name: 78046188
Synonym: XCV0632
Alternate gene names: NA
Gene position: 713619-712084 (Counterclockwise)
Preceding gene: 78046191
Following gene: 78046183
Centisome position: 13.78
GC content: 65.95
Gene sequence:
>1536_bases ATGGTGCGTATTGTCGCTGCCCCAGCAAGGACGTTGCCCATGTCACAGCACGCGATCGAGGACGTGATCGAACGCGCCAT CTACCTGGTCGATCGCAGTACGCAAAACGCCGCGCACCAGGCCGCGCTCATCCACGCCTTGCTTCACCTGCAGGCACGCT ACGACACCGGCCTGACCTGGCTGCGCATGCATGAGGTGCTGCTGCGCCACGGCGTGCTGGTGCGCACGCCGGTGGAGGCC ATCGACGATGCGGCGCTGCGCGCCCAAGCGAGGGCTGCCGAGACATCGTGCTGGCTGGAGAGCGATCGTGGCACGGGCTA TCTACACCTGGACGAAAACGCATCCGTGCTCTACCAGCAAACGGGAACCGGCCACGCCATGCCGGTCTCCGCCTTGTTCC GTGACGTGCTGACGCTTGCCGATCAGGCCGACGATGGCGAGTTATTCACCGACCTCCATGGCCTGCTGGTCAACGGCTGG CTCGACGCCACATTCACCGCCGAGGACGGCCTGGCGTCGTCGCTGGACGGTCTTGTCGCCTGCGACGACCTGCAGGCGAT CCGTGGCATTGCCGCGCGGCGTGGACTCAAGCGCCGGCGCGGCGTATCGGAAGATCTCGCGCTGCCTCACCTCAGCGAGA GCCAGGAGCCTGGCGAGATCGAGCAAAACGCCGGCTTGCGCTTCTTCCTGCAGCCCAAGCGCACGCCCACTGCCTTGCTG GCCGCACGCAACAGGACCCTGCGCCAGCTCGCACGCGTGCAGGAGCTGATCCCGATGCTGGTGGAGCAGCGCCTGAGCGC CGCGCTGCAGCAGGCAGGTTGGTCGGCGGTTGCCGCGCCACCCGAGCACCCATGGTGCTGGACCCGCGACCGCGACGGCA GCCGCCAGTGTCTGTGGGCCGCCCACGACACGACGTGTGGGGAGTTGATTGTCCAGGCAGGCCTGCAGCACGCCCGGCTG CTGGACTGGCAGCAACGTTCGGCAACCACCCAACTGCACGACCTGCACATATACGATCGCGCCGCACCGCTGCTCGGCAA GCATGCGCTCAACCCCAAGGACATCGGCACGTATGGCGGCTTAAGACTGGACCCGGCTCACAGCGATGCGCAGCTGGGCA ACGCCTTCGACCGTCTGGCCGCTGCCCTCCCTGCCCTGGACGTGTACTACTTCGATGTGATCGCGCAGCAGTTGTCCGGG CCATTCTTCGATCGCGACCTCGAGATGGTCATGCGCACGATGGAGGAAGGCCACAGCACCGGGGCAATCGCCCAGGATGT GCTGCTTGCCAGTCCCGACAGCACATTACTGGCGTTTGTGTTCCACCATCTGGAACATGGGGACGACGTCGCTGCGGCAG CGGTGGTTGAGCGCGTGCGCGCACGCCATGCCGCGCGTACGCGTCTGAATGCCTGGCATCGCGCGTATTTGAGCCCATTC CTGCAGCGATGGGACCGGGAGCAGCGCGATATGCCGATGCCGCCAGTGCAGCACGTCCTCCTGCTCAATCACCTGCGCGC ATGTGAATCCGTCTGA
Upstream 100 bases:
>100_bases GGGCCAGTGACGAGTCACATGAGCGCCAGAGAAGGACTTAAGCACTCGCAAAACGCTTCAGGCCGGCGAAGTCGTTCATC GGTTGTCGGGAGCCGCTACG
Downstream 100 bases:
>100_bases ACATGGTCGCCGCCATGACCGCGCTTGCACCGTTCGAATTGGTGACCTCGGCCATGGTTCAGCCCTCCTGCGTCGCCTTT TGAAACTCGATACGCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MVRIVAAPARTLPMSQHAIEDVIERAIYLVDRSTQNAAHQAALIHALLHLQARYDTGLTWLRMHEVLLRHGVLVRTPVEA IDDAALRAQARAAETSCWLESDRGTGYLHLDENASVLYQQTGTGHAMPVSALFRDVLTLADQADDGELFTDLHGLLVNGW LDATFTAEDGLASSLDGLVACDDLQAIRGIAARRGLKRRRGVSEDLALPHLSESQEPGEIEQNAGLRFFLQPKRTPTALL AARNRTLRQLARVQELIPMLVEQRLSAALQQAGWSAVAAPPEHPWCWTRDRDGSRQCLWAAHDTTCGELIVQAGLQHARL LDWQQRSATTQLHDLHIYDRAAPLLGKHALNPKDIGTYGGLRLDPAHSDAQLGNAFDRLAAALPALDVYYFDVIAQQLSG PFFDRDLEMVMRTMEEGHSTGAIAQDVLLASPDSTLLAFVFHHLEHGDDVAAAAVVERVRARHAARTRLNAWHRAYLSPF LQRWDREQRDMPMPPVQHVLLLNHLRACESV
Sequences:
>Translated_511_residues MVRIVAAPARTLPMSQHAIEDVIERAIYLVDRSTQNAAHQAALIHALLHLQARYDTGLTWLRMHEVLLRHGVLVRTPVEA IDDAALRAQARAAETSCWLESDRGTGYLHLDENASVLYQQTGTGHAMPVSALFRDVLTLADQADDGELFTDLHGLLVNGW LDATFTAEDGLASSLDGLVACDDLQAIRGIAARRGLKRRRGVSEDLALPHLSESQEPGEIEQNAGLRFFLQPKRTPTALL AARNRTLRQLARVQELIPMLVEQRLSAALQQAGWSAVAAPPEHPWCWTRDRDGSRQCLWAAHDTTCGELIVQAGLQHARL LDWQQRSATTQLHDLHIYDRAAPLLGKHALNPKDIGTYGGLRLDPAHSDAQLGNAFDRLAAALPALDVYYFDVIAQQLSG PFFDRDLEMVMRTMEEGHSTGAIAQDVLLASPDSTLLAFVFHHLEHGDDVAAAAVVERVRARHAARTRLNAWHRAYLSPF LQRWDREQRDMPMPPVQHVLLLNHLRACESV >Mature_511_residues MVRIVAAPARTLPMSQHAIEDVIERAIYLVDRSTQNAAHQAALIHALLHLQARYDTGLTWLRMHEVLLRHGVLVRTPVEA IDDAALRAQARAAETSCWLESDRGTGYLHLDENASVLYQQTGTGHAMPVSALFRDVLTLADQADDGELFTDLHGLLVNGW LDATFTAEDGLASSLDGLVACDDLQAIRGIAARRGLKRRRGVSEDLALPHLSESQEPGEIEQNAGLRFFLQPKRTPTALL AARNRTLRQLARVQELIPMLVEQRLSAALQQAGWSAVAAPPEHPWCWTRDRDGSRQCLWAAHDTTCGELIVQAGLQHARL LDWQQRSATTQLHDLHIYDRAAPLLGKHALNPKDIGTYGGLRLDPAHSDAQLGNAFDRLAAALPALDVYYFDVIAQQLSG PFFDRDLEMVMRTMEEGHSTGAIAQDVLLASPDSTLLAFVFHHLEHGDDVAAAAVVERVRARHAARTRLNAWHRAYLSPF LQRWDREQRDMPMPPVQHVLLLNHLRACESV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56760; Mature: 56760
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIVAAPARTLPMSQHAIEDVIERAIYLVDRSTQNAAHQAALIHALLHLQARYDTGLTW CEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH LRMHEVLLRHGVLVRTPVEAIDDAALRAQARAAETSCWLESDRGTGYLHLDENASVLYQQ HHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEEE TGTGHAMPVSALFRDVLTLADQADDGELFTDLHGLLVNGWLDATFTAEDGLASSLDGLVA CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCEE CDDLQAIRGIAARRGLKRRRGVSEDLALPHLSESQEPGEIEQNAGLRFFLQPKRTPTALL HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHHH AARNRTLRQLARVQELIPMLVEQRLSAALQQAGWSAVAAPPEHPWCWTRDRDGSRQCLWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEE AHDTTCGELIVQAGLQHARLLDWQQRSATTQLHDLHIYDRAAPLLGKHALNPKDIGTYGG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCC LRLDPAHSDAQLGNAFDRLAAALPALDVYYFDVIAQQLSGPFFDRDLEMVMRTMEEGHST EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC GAIAQDVLLASPDSTLLAFVFHHLEHGDDVAAAAVVERVRARHAARTRLNAWHRAYLSPF CHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQRWDREQRDMPMPPVQHVLLLNHLRACESV HHHHCHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRIVAAPARTLPMSQHAIEDVIERAIYLVDRSTQNAAHQAALIHALLHLQARYDTGLTW CEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH LRMHEVLLRHGVLVRTPVEAIDDAALRAQARAAETSCWLESDRGTGYLHLDENASVLYQQ HHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEEE TGTGHAMPVSALFRDVLTLADQADDGELFTDLHGLLVNGWLDATFTAEDGLASSLDGLVA CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCEE CDDLQAIRGIAARRGLKRRRGVSEDLALPHLSESQEPGEIEQNAGLRFFLQPKRTPTALL HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHHH AARNRTLRQLARVQELIPMLVEQRLSAALQQAGWSAVAAPPEHPWCWTRDRDGSRQCLWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEE AHDTTCGELIVQAGLQHARLLDWQQRSATTQLHDLHIYDRAAPLLGKHALNPKDIGTYGG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCC LRLDPAHSDAQLGNAFDRLAAALPALDVYYFDVIAQQLSGPFFDRDLEMVMRTMEEGHST EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC GAIAQDVLLASPDSTLLAFVFHHLEHGDDVAAAAVVERVRARHAARTRLNAWHRAYLSPF CHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQRWDREQRDMPMPPVQHVLLLNHLRACESV HHHHCHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA