| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046142
Identifier: 78046142
GI number: 78046142
Start: 667118
End: 668065
Strand: Reverse
Name: 78046142
Synonym: XCV0586
Alternate gene names: NA
Gene position: 668065-667118 (Counterclockwise)
Preceding gene: 78046147
Following gene: 78046141
Centisome position: 12.9
GC content: 72.47
Gene sequence:
>948_bases ATGGGGCTGACCTGGGCACTGAGCGACGGCCGTGCCGGCAATGCGCGCCAGGCCGAGGCGCTGGCGCGTGCATTCCACCC CGCTGCCTACCAGCCACTGCACCTGCAGACCAACGCGCCGTGGCGTTGGGCGGCGCCGCGGCGGCTCCCCGGCGCACGGC AGGCGTTTGGCGCGGCATTTGCCCGGCAACTGCAGCAGCCCCCGGCGCTGGCCATCGGCTGCGGCAGGCAGGCGGCGCTG GCCACCCGGTTGCTGCGTGCCCACGGCAGCCGCAGCGTGCAGATCCTGGATCCGCGGCTGGACCCGCGGCACTGGGACCT GTTGGTGGTGCCCGAGCACGATGCACTGCGCGGCAGCAACGTGCTCACCCTGCTCGGCAGCCTGCACCCGGTGGACGATG CGTGGCTGGCGGCCGGGCGGGCCGCCTTCCCCGCCTTGGGCGGCTTGCCGGGCCCGCGGCTGGCGCTGCTGGTCGGTGGC CCCACCGCCCAGGTGCCGTGGACGCCACAGGCGCTGGCGGCGCTGTGCACGCGCGTGAGCGCCCAACTGCGCGCGCTGGG CGGCAGCCTGCTGGTGACCACCTCGCGCCGCACACCGGGCGATGCACTCGCAACGCTGCGCGCGGCCTGCGCCGGCCTGC CGCATCTGCTGTGGTGCGATGAGCGCGATGGGCCGAACCCCTACGCTGGACTGCTCGGCTGGGCCGATGCCATCGTGGCC AGCGCCGATTCGGTCAATCTGCTCTCCGAAGCCTGTGCCACCCGCGTACCGGTCGCTGCCGCGTTCGGCGAGCAGGCACG TGGGCGCGTTGACACCTATTTGCAAGCGTTGCGGCAACGCCAGCGCTTGCACTTAGTCGATGAAGTTCTCGCCAGCGCTG TCGATATCGTTCCTGTGCGCGAAACCGAGCGCATCGCCATGCAGGTACGCGCGCGCCTGCTGCCATAA
Upstream 100 bases:
>100_bases GCTGCGGCGTCGGCGCCAGTGTGAAGACCCGCAGTGTAGAGTGGCGCGATTGCCGCCACACGCGTTCAATCTGAAACAAA TCTATGTCGGATCTGAAACG
Downstream 100 bases:
>100_bases CCCAACGCCCGCCAGCGGGCCAGCGAGACAAGGACGATGTGCATGACAGGGACGATCAACGCGCGATGGATTCGGCAAAC CCGGCGCAAGGCAATTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGLTWALSDGRAGNARQAEALARAFHPAAYQPLHLQTNAPWRWAAPRRLPGARQAFGAAFARQLQQPPALAIGCGRQAAL ATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDALRGSNVLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGG PTAQVPWTPQALAALCTRVSAQLRALGGSLLVTTSRRTPGDALATLRAACAGLPHLLWCDERDGPNPYAGLLGWADAIVA SADSVNLLSEACATRVPVAAAFGEQARGRVDTYLQALRQRQRLHLVDEVLASAVDIVPVRETERIAMQVRARLLP
Sequences:
>Translated_315_residues MGLTWALSDGRAGNARQAEALARAFHPAAYQPLHLQTNAPWRWAAPRRLPGARQAFGAAFARQLQQPPALAIGCGRQAAL ATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDALRGSNVLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGG PTAQVPWTPQALAALCTRVSAQLRALGGSLLVTTSRRTPGDALATLRAACAGLPHLLWCDERDGPNPYAGLLGWADAIVA SADSVNLLSEACATRVPVAAAFGEQARGRVDTYLQALRQRQRLHLVDEVLASAVDIVPVRETERIAMQVRARLLP >Mature_314_residues GLTWALSDGRAGNARQAEALARAFHPAAYQPLHLQTNAPWRWAAPRRLPGARQAFGAAFARQLQQPPALAIGCGRQAALA TRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDALRGSNVLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGGP TAQVPWTPQALAALCTRVSAQLRALGGSLLVTTSRRTPGDALATLRAACAGLPHLLWCDERDGPNPYAGLLGWADAIVAS ADSVNLLSEACATRVPVAAAFGEQARGRVDTYLQALRQRQRLHLVDEVLASAVDIVPVRETERIAMQVRARLLP
Specific function: Unknown
COG id: COG3660
COG function: function code M; Predicted nucleoside-diphosphate-sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33591; Mature: 33460
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTWALSDGRAGNARQAEALARAFHPAAYQPLHLQTNAPWRWAAPRRLPGARQAFGAAF CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH ARQLQQPPALAIGCGRQAALATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDALRGSN HHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCC VLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGGPTAQVPWTPQALAALCTRVS HHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH AQLRALGGSLLVTTSRRTPGDALATLRAACAGLPHLLWCDERDGPNPYAGLLGWADAIVA HHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHH SADSVNLLSEACATRVPVAAAFGEQARGRVDTYLQALRQRQRLHLVDEVLASAVDIVPVR CCCHHHHHHHHHHHCCCHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCC ETERIAMQVRARLLP HHHHHHHHHHHHCCC >Mature Secondary Structure GLTWALSDGRAGNARQAEALARAFHPAAYQPLHLQTNAPWRWAAPRRLPGARQAFGAAF CEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH ARQLQQPPALAIGCGRQAALATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDALRGSN HHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCC VLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGGPTAQVPWTPQALAALCTRVS HHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH AQLRALGGSLLVTTSRRTPGDALATLRAACAGLPHLLWCDERDGPNPYAGLLGWADAIVA HHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHH SADSVNLLSEACATRVPVAAAFGEQARGRVDTYLQALRQRQRLHLVDEVLASAVDIVPVR CCCHHHHHHHHHHHCCCHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCC ETERIAMQVRARLLP HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA